RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 NUP62CLQ9H1M0 184 aa21.48■■□□□ 1.03
PDLIM3-201ENST00000284767 QTRT2Q9H974 415 aaKnown RBP21.48■■□□□ 1.03
PDLIM3-201ENST00000284767 LAMB2P55268 1798 aa21.48■■□□□ 1.03
PDLIM3-201ENST00000284767 ZFYP08048 801 aaPredicted RBP21.47■■□□□ 1.03
PDLIM3-201ENST00000284767 UTP14CQ5TAP6 766 aaKnown RBP21.47■■□□□ 1.03
PDLIM3-201ENST00000284767 ATRNO75882 1429 aa21.47■■□□□ 1.03
PDLIM3-201ENST00000284767 E7EWF7 191 aa21.47■■□□□ 1.03
PDLIM3-201ENST00000284767 ONECUT3O60422 494 aaPredicted RBP21.47■■□□□ 1.03
PDLIM3-201ENST00000284767 ADD2P35612 726 aa21.47■■□□□ 1.03
PDLIM3-201ENST00000284767 TTC6Q86TZ1 520 aa21.47■■□□□ 1.03
PDLIM3-201ENST00000284767 SPATA5Q8NB90 893 aa21.47■■□□□ 1.03
PDLIM3-201ENST00000284767 SETDB2Q96T68 719 aa21.47■■□□□ 1.03
PDLIM3-201ENST00000284767 SCN7AQ01118 1682 aa21.47■■□□□ 1.03
PDLIM3-201ENST00000284767 SBF2Q86WG5 1849 aa21.47■■□□□ 1.03
PDLIM3-201ENST00000284767 FGAP02671 866 aa21.46■■□□□ 1.03
PDLIM3-201ENST00000284767 RTL9Q8NET4 1388 aa21.46■■□□□ 1.03
PDLIM3-201ENST00000284767 BRF1Q92994 677 aa21.46■■□□□ 1.03
PDLIM3-201ENST00000284767 ZNF532Q9HCE3 1301 aa21.46■■□□□ 1.03
PDLIM3-201ENST00000284767 FAM196AQ6ZSG2 479 aa21.46■■□□□ 1.03
PDLIM3-201ENST00000284767 NBPF5PQ86XG9 351 aaPredicted RBP21.46■■□□□ 1.03
PDLIM3-201ENST00000284767 MYH7P12883 1935 aa21.46■■□□□ 1.03
PDLIM3-201ENST00000284767 LAMA4Q16363 1823 aa21.46■■□□□ 1.03
PDLIM3-201ENST00000284767 ANKRD1Q15327 319 aa21.45■■□□□ 1.03
PDLIM3-201ENST00000284767 LRRFIP1Q32MZ4 808 aaKnown RBP21.45■■□□□ 1.03
PDLIM3-201ENST00000284767 SPC24Q8NBT2 197 aa21.45■■□□□ 1.03
PDLIM3-201ENST00000284767 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.45■■□□□ 1.03
PDLIM3-201ENST00000284767 MRVI1Q9Y6F6 885 aa21.45■■□□□ 1.03
PDLIM3-201ENST00000284767 UQCRFS1P1P0C7P4 283 aa21.45■■□□□ 1.02
PDLIM3-201ENST00000284767 TYRO3Q06418 890 aa21.45■■□□□ 1.02
PDLIM3-201ENST00000284767 SF3B3Q15393 1217 aaKnown RBP21.45■■□□□ 1.02
PDLIM3-201ENST00000284767 ANKRD18AQ8IVF6 992 aa21.45■■□□□ 1.02
PDLIM3-201ENST00000284767 CDC5LQ99459 802 aaKnown RBP21.45■■□□□ 1.02
PDLIM3-201ENST00000284767 SCAND2PQ9GZW5 306 aaPredicted RBP21.45■■□□□ 1.02
PDLIM3-201ENST00000284767 HSP90B1P14625 803 aaKnown RBP21.44■■□□□ 1.02
PDLIM3-201ENST00000284767 PDE6AP16499 860 aa21.44■■□□□ 1.02
PDLIM3-201ENST00000284767 SLC51AQ86UW1 340 aa21.44■■□□□ 1.02
PDLIM3-201ENST00000284767 TICAM2Q86XR7 235 aa21.44■■□□□ 1.02
PDLIM3-201ENST00000284767 ALDH8A1Q9H2A2 487 aaPredicted RBP21.44■■□□□ 1.02
PDLIM3-201ENST00000284767 CASZ1Q86V15 1759 aa21.44■■□□□ 1.02
PDLIM3-201ENST00000284767 TAF1LQ8IZX4 1826 aa21.44■■□□□ 1.02
PDLIM3-201ENST00000284767 RIOK3O14730 519 aaKnown RBP21.43■■□□□ 1.02
PDLIM3-201ENST00000284767 GYG1P46976 350 aa21.43■■□□□ 1.02
PDLIM3-201ENST00000284767 FGD1P98174 961 aa21.43■■□□□ 1.02
PDLIM3-201ENST00000284767 DMTNQ08495 405 aa21.43■■□□□ 1.02
PDLIM3-201ENST00000284767 TTF1Q15361 905 aaPredicted RBP21.43■■□□□ 1.02
PDLIM3-201ENST00000284767 ARAP2Q8WZ64 1704 aa21.43■■□□□ 1.02
PDLIM3-201ENST00000284767 CTIFO43310 598 aaKnown RBP21.43■■□□□ 1.02
PDLIM3-201ENST00000284767 CDC37L1Q7L3B6 337 aa21.43■■□□□ 1.02
PDLIM3-201ENST00000284767 DHX32Q7L7V1 743 aaKnown RBP21.43■■□□□ 1.02
PDLIM3-201ENST00000284767 GPHNQ9NQX3 736 aaPredicted RBP21.43■■□□□ 1.02
PDLIM3-201ENST00000284767 DDX19AQ9NUU7 478 aaKnown RBP21.43■■□□□ 1.02
PDLIM3-201ENST00000284767 PPP4R3BQ5MIZ7 849 aa21.43■■□□□ 1.02
PDLIM3-201ENST00000284767 DENND2AQ9ULE3 1009 aa21.43■■□□□ 1.02
PDLIM3-201ENST00000284767 LY75O60449 1722 aa21.42■■□□□ 1.02
PDLIM3-201ENST00000284767 TCRBV5S4A2TA0A5A2 114 aa21.42■■□□□ 1.02
PDLIM3-201ENST00000284767 JAK2O60674 1132 aa21.42■■□□□ 1.02
PDLIM3-201ENST00000284767 PPFIA3O75145 1194 aa21.42■■□□□ 1.02
PDLIM3-201ENST00000284767 LIG1P18858 919 aa21.42■■□□□ 1.02
PDLIM3-201ENST00000284767 APOBRQ0VD83 1088 aa21.42■■□□□ 1.02
PDLIM3-201ENST00000284767 RBM43Q6ZSC3 357 aaKnown RBP21.42■■□□□ 1.02
PDLIM3-201ENST00000284767 MAGEB6Q8N7X4 407 aa21.42■■□□□ 1.02
PDLIM3-201ENST00000284767 ANKRD7Q92527 254 aa21.42■■□□□ 1.02
PDLIM3-201ENST00000284767 TNMDQ9H2S6 317 aa21.42■■□□□ 1.02
PDLIM3-201ENST00000284767 RFC4P35249 363 aa21.42■■□□□ 1.02
PDLIM3-201ENST00000284767 EXOSC10Q01780 885 aaKnown RBP21.42■■□□□ 1.02
PDLIM3-201ENST00000284767 MINPP1Q9UNW1 487 aa21.42■■□□□ 1.02
PDLIM3-201ENST00000284767 ZSCAN20P17040 1043 aaPredicted RBP21.41■■□□□ 1.02
PDLIM3-201ENST00000284767 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.41■■□□□ 1.02
PDLIM3-201ENST00000284767 PDCL2Q8N4E4 241 aa21.41■■□□□ 1.02
PDLIM3-201ENST00000284767 C4BP0C0L5 1744 aa21.41■■□□□ 1.02
PDLIM3-201ENST00000284767 PTGS1P23219 599 aa21.41■■□□□ 1.02
PDLIM3-201ENST00000284767 SLC10A5Q5PT55 438 aa21.41■■□□□ 1.02
PDLIM3-201ENST00000284767 TRAPPC3LQ5T215 181 aa21.41■■□□□ 1.02
PDLIM3-201ENST00000284767 NKX2-3Q8TAU0 364 aa21.41■■□□□ 1.02
PDLIM3-201ENST00000284767 BCL11BQ9C0K0 894 aaPredicted RBP21.41■■□□□ 1.02
PDLIM3-201ENST00000284767 GOLGA6L4A6NEF3 574 aa21.4■■□□□ 1.02
PDLIM3-201ENST00000284767 APPP05067 770 aa21.4■■□□□ 1.02
PDLIM3-201ENST00000284767 KLRK1P26718 216 aa21.4■■□□□ 1.02
PDLIM3-201ENST00000284767 ZSCAN25Q6NSZ9 544 aa21.4■■□□□ 1.02
PDLIM3-201ENST00000284767 NLRP3Q96P20 1036 aa21.4■■□□□ 1.02
PDLIM3-201ENST00000284767 PRDM10Q9NQV6 1147 aa21.4■■□□□ 1.02
PDLIM3-201ENST00000284767 BSDC1Q9NW68 430 aaPredicted RBP21.4■■□□□ 1.02
PDLIM3-201ENST00000284767 TRIM37O94972 964 aa21.4■■□□□ 1.02
PDLIM3-201ENST00000284767 UBE3CQ15386 1083 aa21.4■■□□□ 1.02
PDLIM3-201ENST00000284767 IMMTQ16891 758 aaKnown RBP21.4■■□□□ 1.02
PDLIM3-201ENST00000284767 LUZP1Q86V48 1076 aa21.4■■□□□ 1.02
PDLIM3-201ENST00000284767 GTF3C6Q969F1 213 aa21.4■■□□□ 1.02
PDLIM3-201ENST00000284767 NAP1L2Q9ULW6 460 aaPredicted RBP21.4■■□□□ 1.02
PDLIM3-201ENST00000284767 NPHP1O15259 732 aa21.39■■□□□ 1.01
PDLIM3-201ENST00000284767 SCRN1Q12765 414 aa21.39■■□□□ 1.01
PDLIM3-201ENST00000284767 CAMK4Q16566 473 aa21.39■■□□□ 1.01
PDLIM3-201ENST00000284767 TPTE2Q6XPS3 522 aa21.39■■□□□ 1.01
PDLIM3-201ENST00000284767 FERMT3Q86UX7 667 aa21.39■■□□□ 1.01
PDLIM3-201ENST00000284767 SPATA32Q96LK8 384 aa21.39■■□□□ 1.01
PDLIM3-201ENST00000284767 CLSTN2Q9H4D0 955 aa21.39■■□□□ 1.01
PDLIM3-201ENST00000284767 CBX8Q9HC52 389 aa21.39■■□□□ 1.01
PDLIM3-201ENST00000284767 DACT1Q9NYF0 836 aa21.39■■□□□ 1.01
PDLIM3-201ENST00000284767 ANO6Q4KMQ2 910 aa21.39■■□□□ 1.01
PDLIM3-201ENST00000284767 NYXQ9GZU5 481 aa21.39■■□□□ 1.01
PDLIM3-201ENST00000284767 NBPF3Q9H094 633 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 248.4 ms