RNA–Protein interactions for RNA: ENST00000284384.6

PRKCA-201, Transcript of protein kinase C alpha, humanhuman

TSL 5

Gene PRKCA, Length 2,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-201ENST00000284384 PALD1Q9ULE6 856 aa9.39□□□□□ -0.91
PRKCA-201ENST00000284384 DDX60Q8IY21 1712 aaKnown RBP9.39□□□□□ -0.91
PRKCA-201ENST00000284384 H7C1W4 665 aa9.39□□□□□ -0.91
PRKCA-201ENST00000284384 ZNF609O15014 1411 aa9.39□□□□□ -0.91
PRKCA-201ENST00000284384 CIAO1O76071 339 aa9.39□□□□□ -0.91
PRKCA-201ENST00000284384 LETM1O95202 739 aaPredicted RBP9.39□□□□□ -0.91
PRKCA-201ENST00000284384 MBD3O95983 291 aa9.39□□□□□ -0.91
PRKCA-201ENST00000284384 MMP14P50281 582 aa9.39□□□□□ -0.91
PRKCA-201ENST00000284384 HDLBPQ00341 1268 aaKnown RBP9.39□□□□□ -0.91
PRKCA-201ENST00000284384 CABLES1Q8TDN4 633 aa9.39□□□□□ -0.91
PRKCA-201ENST00000284384 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.39□□□□□ -0.91
PRKCA-201ENST00000284384 PPP1R12CQ9BZL4 782 aa9.39□□□□□ -0.91
PRKCA-201ENST00000284384 PCDH12Q9NPG4 1184 aa9.39□□□□□ -0.91
PRKCA-201ENST00000284384 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.39□□□□□ -0.91
PRKCA-201ENST00000284384 USP16Q9Y5T5 823 aa9.39□□□□□ -0.91
PRKCA-201ENST00000284384 SNX14Q9Y5W7 946 aa9.39□□□□□ -0.91
PRKCA-201ENST00000284384 LAMA4Q16363 1823 aa9.38□□□□□ -0.91
PRKCA-201ENST00000284384 COPB2P35606 906 aa9.38□□□□□ -0.91
PRKCA-201ENST00000284384 HMGN5P82970 282 aaKnown RBP9.38□□□□□ -0.91
PRKCA-201ENST00000284384 TRIM28Q13263 835 aaKnown RBP9.38□□□□□ -0.91
PRKCA-201ENST00000284384 SPC25Q9HBM1 224 aa9.38□□□□□ -0.91
PRKCA-201ENST00000284384 LMBRD1Q9NUN5 540 aa9.38□□□□□ -0.91
PRKCA-201ENST00000284384 WDR33Q9C0J8 1336 aaKnown RBP9.38□□□□□ -0.91
PRKCA-201ENST00000284384 NUP98P52948 1817 aa9.38□□□□□ -0.91
PRKCA-201ENST00000284384 PRPF40AO75400 957 aaKnown RBP9.38□□□□□ -0.91
PRKCA-201ENST00000284384 MYL6BP14649 208 aa9.38□□□□□ -0.91
PRKCA-201ENST00000284384 PSMA5P28066 241 aa9.38□□□□□ -0.91
PRKCA-201ENST00000284384 AIMP1Q12904 312 aaKnown RBP9.38□□□□□ -0.91
PRKCA-201ENST00000284384 RNF20Q5VTR2 975 aa9.38□□□□□ -0.91
PRKCA-201ENST00000284384 EAF2Q96CJ1 260 aaPredicted RBP9.38□□□□□ -0.91
PRKCA-201ENST00000284384 CWC25Q9NXE8 425 aaPredicted RBP9.38□□□□□ -0.91
PRKCA-201ENST00000284384 TBC1D2BQ9UPU7 963 aa9.38□□□□□ -0.91
PRKCA-201ENST00000284384 NUB1Q9Y5A7 615 aa9.38□□□□□ -0.91
PRKCA-201ENST00000284384 ZKSCAN1P17029 563 aaPredicted RBP9.37□□□□□ -0.91
PRKCA-201ENST00000284384 PTPN12Q05209 780 aaKnown RBP9.37□□□□□ -0.91
PRKCA-201ENST00000284384 ANKRD1Q15327 319 aa9.37□□□□□ -0.91
PRKCA-201ENST00000284384 TMEM87AQ8NBN3 555 aa9.37□□□□□ -0.91
PRKCA-201ENST00000284384 MAP4K1Q92918 833 aa9.37□□□□□ -0.91
PRKCA-201ENST00000284384 PRIMPOLQ96LW4 560 aa9.37□□□□□ -0.91
PRKCA-201ENST00000284384 PLA2G12BQ9BX93 195 aa9.37□□□□□ -0.91
PRKCA-201ENST00000284384 MFRPQ9BY79 579 aa9.37□□□□□ -0.91
PRKCA-201ENST00000284384 TRIM34Q9BYJ4 488 aa9.37□□□□□ -0.91
PRKCA-201ENST00000284384 QTRT2Q9H974 415 aaKnown RBP9.37□□□□□ -0.91
PRKCA-201ENST00000284384 ZSWIM6Q9HCJ5 1215 aa9.37□□□□□ -0.91
PRKCA-201ENST00000284384 BSDC1Q9NW68 430 aaPredicted RBP9.37□□□□□ -0.91
PRKCA-201ENST00000284384 LIMCH1Q9UPQ0 1083 aa9.37□□□□□ -0.91
PRKCA-201ENST00000284384 MYH15Q9Y2K3 1946 aa9.37□□□□□ -0.91
PRKCA-201ENST00000284384 S100BP04271 92 aaPredicted RBP9.37□□□□□ -0.91
PRKCA-201ENST00000284384 LMOD1P29536 600 aaPredicted RBP9.37□□□□□ -0.91
PRKCA-201ENST00000284384 NECTIN1Q15223 517 aa9.37□□□□□ -0.91
PRKCA-201ENST00000284384 TNNI3KQ59H18 835 aa9.37□□□□□ -0.91
PRKCA-201ENST00000284384 LRSAM1Q6UWE0 723 aa9.37□□□□□ -0.91
PRKCA-201ENST00000284384 FPGT-TNNI3KV9GXZ4 949 aa9.37□□□□□ -0.91
PRKCA-201ENST00000284384 SH3TC1Q8TE82 1336 aa9.36□□□□□ -0.91
PRKCA-201ENST00000284384 BCORQ6W2J9 1755 aa9.36□□□□□ -0.91
PRKCA-201ENST00000284384 SYCE3A1L190 88 aa9.36□□□□□ -0.91
PRKCA-201ENST00000284384 NRDCO43847 1150 aa9.36□□□□□ -0.91
PRKCA-201ENST00000284384 ZRANB2O95218 330 aaKnown RBP eCLIP9.36□□□□□ -0.912e-9■■■■■ 60.6
PRKCA-201ENST00000284384 RAD51AP2Q09MP3 1159 aa9.36□□□□□ -0.91
PRKCA-201ENST00000284384 KRT32Q14532 448 aa9.36□□□□□ -0.91
PRKCA-201ENST00000284384 ZGPATQ8N5A5 531 aaKnown RBP9.36□□□□□ -0.91
PRKCA-201ENST00000284384 RNF214Q8ND24 703 aa9.36□□□□□ -0.91
PRKCA-201ENST00000284384 C1orf131Q8NDD1 294 aaKnown RBP9.36□□□□□ -0.91
PRKCA-201ENST00000284384 TMC2Q8TDI7 906 aa9.36□□□□□ -0.91
PRKCA-201ENST00000284384 IL25Q9H293 177 aa9.36□□□□□ -0.91
PRKCA-201ENST00000284384 KLF15Q9UIH9 416 aa9.36□□□□□ -0.91
PRKCA-201ENST00000284384 PA2G4Q9UQ80 394 aaKnown RBP9.36□□□□□ -0.91
PRKCA-201ENST00000284384 CTDP1Q9Y5B0 961 aaPredicted RBP9.36□□□□□ -0.91
PRKCA-201ENST00000284384 BCL9LQ86UU0 1499 aa9.36□□□□□ -0.91
PRKCA-201ENST00000284384 AXDND1Q5T1B0 1012 aaPredicted RBP9.36□□□□□ -0.91
PRKCA-201ENST00000284384 USPL1Q5W0Q7 1092 aa9.36□□□□□ -0.91
PRKCA-201ENST00000284384 CWC27Q6UX04 472 aaKnown RBP9.36□□□□□ -0.91
PRKCA-201ENST00000284384 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.36□□□□□ -0.91
PRKCA-201ENST00000284384 ZDHHC9Q9Y397 364 aa9.36□□□□□ -0.91
PRKCA-201ENST00000284384 ATP6V1DQ9Y5K8 247 aa9.36□□□□□ -0.91
PRKCA-201ENST00000284384 BCL9O00512 1426 aa9.36□□□□□ -0.91
PRKCA-201ENST00000284384 A0A087WZG4 1122 aa9.35□□□□□ -0.91
PRKCA-201ENST00000284384 NBPF26B4DH59 902 aa9.35□□□□□ -0.91
PRKCA-201ENST00000284384 GOLIM4O00461 696 aa9.35□□□□□ -0.91
PRKCA-201ENST00000284384 SCP2P22307 547 aa9.35□□□□□ -0.91
PRKCA-201ENST00000284384 IL15P40933 162 aaPredicted RBP9.35□□□□□ -0.91
PRKCA-201ENST00000284384 NBPF14Q5TI25 921 aa9.35□□□□□ -0.91
PRKCA-201ENST00000284384 NBPF10Q6P3W6 841 aaKnown RBP9.35□□□□□ -0.91
PRKCA-201ENST00000284384 DDX46Q7L014 1031 aaKnown RBP9.35□□□□□ -0.91
PRKCA-201ENST00000284384 FILIP1Q7Z7B0 1213 aa9.35□□□□□ -0.91
PRKCA-201ENST00000284384 NBPF15Q8N660 670 aa9.35□□□□□ -0.91
PRKCA-201ENST00000284384 TSC1Q92574 1164 aa9.35□□□□□ -0.91
PRKCA-201ENST00000284384 HAUS7Q99871 368 aa9.35□□□□□ -0.91
PRKCA-201ENST00000284384 MRPL42Q9Y6G3 142 aaKnown RBP9.35□□□□□ -0.91
PRKCA-201ENST00000284384 CDHR2Q9BYE9 1310 aa9.35□□□□□ -0.91
PRKCA-201ENST00000284384 COL5A3P25940 1745 aaPredicted RBP9.35□□□□□ -0.91
PRKCA-201ENST00000284384 FOXO4P98177 505 aa9.35□□□□□ -0.91
PRKCA-201ENST00000284384 UBE3BQ7Z3V4 1068 aa9.35□□□□□ -0.91
PRKCA-201ENST00000284384 JDP2Q8WYK2 163 aa9.35□□□□□ -0.91
PRKCA-201ENST00000284384 ISCA1Q9BUE6 129 aa9.35□□□□□ -0.91
PRKCA-201ENST00000284384 INO80BQ9C086 356 aaPredicted RBP9.35□□□□□ -0.91
PRKCA-201ENST00000284384 KIF3AQ9Y496 699 aa9.35□□□□□ -0.91
PRKCA-201ENST00000284384 CYP46A1Q9Y6A2 500 aa9.35□□□□□ -0.91
PRKCA-201ENST00000284384 LRRFIP1Q32MZ4 808 aaKnown RBP9.34□□□□□ -0.91
PRKCA-201ENST00000284384 EPHA10Q5JZY3 1008 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms