RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 LTBP1Q14766 1721 aa24.92■■□□□ 1.58
YBX3-202ENST00000279550 LAMA4Q16363 1823 aa24.92■■□□□ 1.58
YBX3-202ENST00000279550 OLFM4Q6UX06 510 aa24.92■■□□□ 1.58
YBX3-202ENST00000279550 C15orf52Q6ZUT6 534 aaKnown RBP24.92■■□□□ 1.58
YBX3-202ENST00000279550 TMX4Q9H1E5 349 aaPredicted RBP24.92■■□□□ 1.58
YBX3-202ENST00000279550 HIBADHP31937 336 aaKnown RBP24.91■■□□□ 1.58
YBX3-202ENST00000279550 TTLL5Q6EMB2 1281 aa24.91■■□□□ 1.58
YBX3-202ENST00000279550 TBC1D16Q8TBP0 767 aa24.91■■□□□ 1.58
YBX3-202ENST00000279550 POLLQ9UGP5 575 aa24.91■■□□□ 1.58
YBX3-202ENST00000279550 CACNA1SQ13698 1873 aa24.9■■□□□ 1.58
YBX3-202ENST00000279550 PTMSP20962 102 aa24.9■■□□□ 1.58
YBX3-202ENST00000279550 ADD2P35612 726 aa24.9■■□□□ 1.58
YBX3-202ENST00000279550 PTGER2P43116 358 aa24.9■■□□□ 1.58
YBX3-202ENST00000279550 TTF1Q15361 905 aaPredicted RBP24.9■■□□□ 1.58
YBX3-202ENST00000279550 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.9■■□□□ 1.58
YBX3-202ENST00000279550 DLEC1Q9Y238 1755 aa24.9■■□□□ 1.58
YBX3-202ENST00000279550 SLX4Q8IY92 1834 aa24.89■■□□□ 1.58
YBX3-202ENST00000279550 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.89■■□□□ 1.58
YBX3-202ENST00000279550 IQSEC3Q9UPP2 1182 aaPredicted RBP24.89■■□□□ 1.58
YBX3-202ENST00000279550 SMC3Q9UQE7 1217 aa24.89■■□□□ 1.58
YBX3-202ENST00000279550 GOLGA6L22H0YM25 854 aa24.89■■□□□ 1.57
YBX3-202ENST00000279550 DPEP1P16444 411 aa24.89■■□□□ 1.57
YBX3-202ENST00000279550 KCNA3P22001 575 aa24.89■■□□□ 1.57
YBX3-202ENST00000279550 TGFB2P61812 414 aa24.89■■□□□ 1.57
YBX3-202ENST00000279550 ANKRD1Q15327 319 aa24.89■■□□□ 1.57
YBX3-202ENST00000279550 MPNDQ8N594 471 aa24.89■■□□□ 1.57
YBX3-202ENST00000279550 GPR101Q96P66 508 aaPredicted RBP24.89■■□□□ 1.57
YBX3-202ENST00000279550 LMBRD1Q9NUN5 540 aa24.89■■□□□ 1.57
YBX3-202ENST00000279550 WWC3Q9ULE0 1092 aa24.89■■□□□ 1.57
YBX3-202ENST00000279550 GOLGB1Q14789 3259 aaKnown RBP24.88■■□□□ 1.57
YBX3-202ENST00000279550 C6orf229H3BNL8 230 aa24.88■■□□□ 1.57
YBX3-202ENST00000279550 SLC9C2Q5TAH2 1124 aa24.88■■□□□ 1.57
YBX3-202ENST00000279550 SEMA3EO15041 775 aa24.87■■□□□ 1.57
YBX3-202ENST00000279550 IDH1O75874 414 aaKnown RBP24.87■■□□□ 1.57
YBX3-202ENST00000279550 DPP8Q6V1X1 898 aaPredicted RBP24.87■■□□□ 1.57
YBX3-202ENST00000279550 TTLL6Q8N841 843 aa24.87■■□□□ 1.57
YBX3-202ENST00000279550 C7orf43Q8WVR3 580 aa24.87■■□□□ 1.57
YBX3-202ENST00000279550 DENND2AQ9ULE3 1009 aa24.87■■□□□ 1.57
YBX3-202ENST00000279550 DOCK2Q92608 1830 aa24.87■■□□□ 1.57
YBX3-202ENST00000279550 DUOX1Q9NRD9 1551 aa24.87■■□□□ 1.57
YBX3-202ENST00000279550 COL1A1P02452 1464 aaPredicted RBP24.87■■□□□ 1.57
YBX3-202ENST00000279550 E7EWF7 191 aa24.86■■□□□ 1.57
YBX3-202ENST00000279550 GPAA1O43292 621 aa24.86■■□□□ 1.57
YBX3-202ENST00000279550 PDE6AP16499 860 aa24.86■■□□□ 1.57
YBX3-202ENST00000279550 SKOR2Q2VWA4 1001 aaPredicted RBP24.86■■□□□ 1.57
YBX3-202ENST00000279550 ZSCAN25Q6NSZ9 544 aa24.86■■□□□ 1.57
YBX3-202ENST00000279550 Q6ZUG5 572 aa24.86■■□□□ 1.57
YBX3-202ENST00000279550 ZNF804AQ7Z570 1209 aa24.86■■□□□ 1.57
YBX3-202ENST00000279550 WDR33Q9C0J8 1336 aaKnown RBP24.86■■□□□ 1.57
YBX3-202ENST00000279550 ZNF532Q9HCE3 1301 aa24.86■■□□□ 1.57
YBX3-202ENST00000279550 TCRBV5S4A2TA0A5A2 114 aa24.86■■□□□ 1.57
YBX3-202ENST00000279550 ZBTB22O15209 634 aa24.86■■□□□ 1.57
YBX3-202ENST00000279550 GJB2P29033 226 aa24.86■■□□□ 1.57
YBX3-202ENST00000279550 LRRC2Q9BYS8 371 aa24.86■■□□□ 1.57
YBX3-202ENST00000279550 SYT1P21579 422 aa24.85■■□□□ 1.57
YBX3-202ENST00000279550 UBE3CQ15386 1083 aa24.84■■□□□ 1.57
YBX3-202ENST00000279550 ZNF219Q9P2Y4 722 aaPredicted RBP24.84■■□□□ 1.57
YBX3-202ENST00000279550 PPP1R1BQ9UD71 204 aaPredicted RBP24.84■■□□□ 1.57
YBX3-202ENST00000279550 PDS5AQ29RF7 1337 aaKnown RBP24.84■■□□□ 1.57
YBX3-202ENST00000279550 KIAA1551Q9HCM1 1747 aa24.84■■□□□ 1.57
YBX3-202ENST00000279550 CD2APQ9Y5K6 639 aa24.83■■□□□ 1.57
YBX3-202ENST00000279550 FGAP02671 866 aa24.83■■□□□ 1.57
YBX3-202ENST00000279550 EXOSC10Q01780 885 aaKnown RBP24.83■■□□□ 1.57
YBX3-202ENST00000279550 STK3Q13188 491 aa24.83■■□□□ 1.57
YBX3-202ENST00000279550 CC2D2BQ6DHV5 1058 aa24.83■■□□□ 1.57
YBX3-202ENST00000279550 DHX32Q7L7V1 743 aaKnown RBP24.83■■□□□ 1.57
YBX3-202ENST00000279550 HAND2P61296 217 aa24.82■■□□□ 1.56
YBX3-202ENST00000279550 TDRD7Q8NHU6 1098 aaKnown RBP24.82■■□□□ 1.56
YBX3-202ENST00000279550 SNED1Q8TER0 1413 aa24.81■■□□□ 1.56
YBX3-202ENST00000279550 STX6O43752 255 aa24.81■■□□□ 1.56
YBX3-202ENST00000279550 C21orf2O43822 256 aa24.81■■□□□ 1.56
YBX3-202ENST00000279550 PRPF40AO75400 957 aaKnown RBP24.81■■□□□ 1.56
YBX3-202ENST00000279550 ZSCAN22P10073 491 aaPredicted RBP24.81■■□□□ 1.56
YBX3-202ENST00000279550 SPON1Q9HCB6 807 aa24.81■■□□□ 1.56
YBX3-202ENST00000279550 CTNNA3Q9UI47 895 aa24.81■■□□□ 1.56
YBX3-202ENST00000279550 HMGB1P09429 215 aaKnown RBP24.81■■□□□ 1.56
YBX3-202ENST00000279550 BRF1Q92994 677 aa24.81■■□□□ 1.56
YBX3-202ENST00000279550 ZC3H12CQ9C0D7 883 aaKnown RBP24.81■■□□□ 1.56
YBX3-202ENST00000279550 CD209Q9NNX6 404 aa24.81■■□□□ 1.56
YBX3-202ENST00000279550 PIM2Q9P1W9 311 aa24.81■■□□□ 1.56
YBX3-202ENST00000279550 IL1R1P14778 569 aa24.8■■□□□ 1.56
YBX3-202ENST00000279550 MAP3K12Q12852 859 aa24.8■■□□□ 1.56
YBX3-202ENST00000279550 KLHL40Q2TBA0 621 aa24.8■■□□□ 1.56
YBX3-202ENST00000279550 FOXD4L6Q3SYB3 417 aaPredicted RBP24.8■■□□□ 1.56
YBX3-202ENST00000279550 FOXD4L3Q6VB84 417 aaPredicted RBP24.8■■□□□ 1.56
YBX3-202ENST00000279550 KLHL34Q8N239 644 aa24.8■■□□□ 1.56
YBX3-202ENST00000279550 RTFDC1Q9BY42 306 aaPredicted RBP24.8■■□□□ 1.56
YBX3-202ENST00000279550 DDX49Q9Y6V7 483 aaKnown RBP24.8■■□□□ 1.56
YBX3-202ENST00000279550 MAGEB6Q8N7X4 407 aa24.79■■□□□ 1.56
YBX3-202ENST00000279550 EYA3Q99504 573 aa24.79■■□□□ 1.56
YBX3-202ENST00000279550 LRP2BPQ9P2M1 347 aa24.79■■□□□ 1.56
YBX3-202ENST00000279550 MTMR6Q9Y217 621 aa24.79■■□□□ 1.56
YBX3-202ENST00000279550 MYH13Q9UKX3 1938 aa24.79■■□□□ 1.56
YBX3-202ENST00000279550 RIMBP2O15034 1052 aa24.78■■□□□ 1.56
YBX3-202ENST00000279550 CHAF1AQ13111 956 aaPredicted RBP24.78■■□□□ 1.56
YBX3-202ENST00000279550 IMMTQ16891 758 aaKnown RBP24.78■■□□□ 1.56
YBX3-202ENST00000279550 GTF3C6Q969F1 213 aa24.78■■□□□ 1.56
YBX3-202ENST00000279550 ABCF2Q9UG63 623 aa24.78■■□□□ 1.56
YBX3-202ENST00000279550 GRIPAP1Q4V328 841 aa24.78■■□□□ 1.56
YBX3-202ENST00000279550 STRBPQ96SI9 672 aaKnown RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms