RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 DCAF5Q96JK2 942 aa13.42□□□□□ -0.26
SHPRH-201ENST00000275233 B4DLN1 442 aa13.42□□□□□ -0.26
SHPRH-201ENST00000275233 RRP9O43818 475 aaKnown RBP13.42□□□□□ -0.26
SHPRH-201ENST00000275233 CCNT1O60563 726 aaKnown RBP13.42□□□□□ -0.26
SHPRH-201ENST00000275233 CCT6AP40227 531 aaKnown RBP13.42□□□□□ -0.26
SHPRH-201ENST00000275233 MRPL12P52815 198 aaKnown RBP13.42□□□□□ -0.26
SHPRH-201ENST00000275233 CCDC114Q96M63 670 aa13.42□□□□□ -0.26
SHPRH-201ENST00000275233 CTNND2Q9UQB3 1225 aa13.42□□□□□ -0.26
SHPRH-201ENST00000275233 URB2Q14146 1524 aaKnown RBP13.42□□□□□ -0.26
SHPRH-201ENST00000275233 CCDC169A6NNP5 214 aa13.42□□□□□ -0.26
SHPRH-201ENST00000275233 GPIHBP1Q8IV16 184 aa13.42□□□□□ -0.26
SHPRH-201ENST00000275233 AATFQ9NY61 560 aaKnown RBP eCLIP13.42□□□□□ -0.26
SHPRH-201ENST00000275233 SYCP2Q9BX26 1530 aa13.41□□□□□ -0.26
SHPRH-201ENST00000275233 CTAGE15A4D2H0 777 aa13.41□□□□□ -0.26
SHPRH-201ENST00000275233 NDC80O14777 642 aa13.41□□□□□ -0.26
SHPRH-201ENST00000275233 TACC1O75410 805 aa13.41□□□□□ -0.26
SHPRH-201ENST00000275233 CTAGE8P0CG41 777 aa13.41□□□□□ -0.26
SHPRH-201ENST00000275233 UVSSAQ2YD98 709 aa13.41□□□□□ -0.26
SHPRH-201ENST00000275233 G2E3Q7L622 706 aa13.41□□□□□ -0.26
SHPRH-201ENST00000275233 HS2ST1Q7LGA3 356 aa13.41□□□□□ -0.26
SHPRH-201ENST00000275233 CTAGE6Q86UF2 777 aa13.41□□□□□ -0.26
SHPRH-201ENST00000275233 CTAGE4Q8IX94 777 aa13.41□□□□□ -0.26
SHPRH-201ENST00000275233 PPP1R9BQ96SB3 815 aa13.41□□□□□ -0.26
SHPRH-201ENST00000275233 FLT4P35916 1363 aa13.41□□□□□ -0.26
SHPRH-201ENST00000275233 ASXL2Q76L83 1435 aa13.41□□□□□ -0.26
SHPRH-201ENST00000275233 NDUFB9Q9Y6M9 179 aa13.41□□□□□ -0.26
SHPRH-201ENST00000275233 GNA11P29992 359 aa13.41□□□□□ -0.26
SHPRH-201ENST00000275233 RLBP1P12271 317 aa13.41□□□□□ -0.26
SHPRH-201ENST00000275233 IFT81Q8WYA0 676 aa13.41□□□□□ -0.26
SHPRH-201ENST00000275233 MAPK8IP1Q9UQF2 711 aa13.41□□□□□ -0.26
SHPRH-201ENST00000275233 USH1GQ495M9 461 aa13.4□□□□□ -0.26
SHPRH-201ENST00000275233 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.4□□□□□ -0.26
SHPRH-201ENST00000275233 SREK1Q8WXA9 508 aaKnown RBP13.4□□□□□ -0.26
SHPRH-201ENST00000275233 C19orf44Q9H6X5 657 aa13.4□□□□□ -0.26
SHPRH-201ENST00000275233 TMOD4Q9NZQ9 345 aa13.4□□□□□ -0.26
SHPRH-201ENST00000275233 NPATQ14207 1427 aa13.4□□□□□ -0.26
SHPRH-201ENST00000275233 A0A1B0GUL7 405 aa13.4□□□□□ -0.26
SHPRH-201ENST00000275233 ERCC3P19447 782 aa13.4□□□□□ -0.26
SHPRH-201ENST00000275233 BIRC3Q13489 604 aa13.4□□□□□ -0.26
SHPRH-201ENST00000275233 A0A1B0GVL5 298 aa13.4□□□□□ -0.26
SHPRH-201ENST00000275233 CTAGE9A4FU28 777 aa13.4□□□□□ -0.26
SHPRH-201ENST00000275233 KIF4AO95239 1232 aa13.4□□□□□ -0.26
SHPRH-201ENST00000275233 KCNA6P17658 529 aa13.4□□□□□ -0.26
SHPRH-201ENST00000275233 CCDC42Q96M95 316 aa13.4□□□□□ -0.26
SHPRH-201ENST00000275233 IFNKQ9P0W0 207 aa13.4□□□□□ -0.26
SHPRH-201ENST00000275233 PRDM1O75626 825 aa13.4□□□□□ -0.26
SHPRH-201ENST00000275233 RAB3IL1Q8TBN0 382 aa13.4□□□□□ -0.26
SHPRH-201ENST00000275233 DENND2AQ9ULE3 1009 aa13.4□□□□□ -0.26
SHPRH-201ENST00000275233 A2MP01023 1474 aa13.4□□□□□ -0.26
SHPRH-201ENST00000275233 HIBADHP31937 336 aaKnown RBP13.4□□□□□ -0.26
SHPRH-201ENST00000275233 PSMC4P43686 418 aa13.4□□□□□ -0.26
SHPRH-201ENST00000275233 TYRO3Q06418 890 aa13.4□□□□□ -0.26
SHPRH-201ENST00000275233 FBF1Q8TES7 1133 aa13.4□□□□□ -0.26
SHPRH-201ENST00000275233 NOD1Q9Y239 953 aa13.4□□□□□ -0.26
SHPRH-201ENST00000275233 CEP83Q9Y592 693 aa13.4□□□□□ -0.26
SHPRH-201ENST00000275233 VAMP4O75379 141 aa13.39□□□□□ -0.27
SHPRH-201ENST00000275233 KIF5AQ12840 1032 aa13.39□□□□□ -0.27
SHPRH-201ENST00000275233 DHX32Q7L7V1 743 aaKnown RBP13.39□□□□□ -0.27
SHPRH-201ENST00000275233 MAK16Q9BXY0 300 aaKnown RBP13.39□□□□□ -0.27
SHPRH-201ENST00000275233 TTC41PQ6P2S7 1318 aa13.39□□□□□ -0.27
SHPRH-201ENST00000275233 DNAJC21Q5F1R6 531 aaKnown RBP13.39□□□□□ -0.27
SHPRH-201ENST00000275233 PIK3AP1Q6ZUJ8 805 aa13.39□□□□□ -0.27
SHPRH-201ENST00000275233 STK32BQ9NY57 414 aa13.39□□□□□ -0.27
SHPRH-201ENST00000275233 BICDL2A1A5D9 508 aa13.39□□□□□ -0.27
SHPRH-201ENST00000275233 CTDSPL2Q05D32 466 aa13.39□□□□□ -0.27
SHPRH-201ENST00000275233 ZNF569Q5MCW4 686 aa13.39□□□□□ -0.27
SHPRH-201ENST00000275233 C6orf163Q5TEZ5 329 aa13.39□□□□□ -0.27
SHPRH-201ENST00000275233 PKNOX2Q96KN3 472 aa13.39□□□□□ -0.27
SHPRH-201ENST00000275233 DDX23Q9BUQ8 820 aaKnown RBP13.39□□□□□ -0.27
SHPRH-201ENST00000275233 RASA3Q14644 834 aa13.39□□□□□ -0.27
SHPRH-201ENST00000275233 ATP6V0A2Q9Y487 856 aa13.39□□□□□ -0.27
SHPRH-201ENST00000275233 PAXBP1Q9Y5B6 917 aa13.39□□□□□ -0.27
SHPRH-201ENST00000275233 MAP3K1Q13233 1512 aa13.39□□□□□ -0.27
SHPRH-201ENST00000275233 A1BGP04217 495 aa13.39□□□□□ -0.27
SHPRH-201ENST00000275233 RAPGEF6Q8TEU7 1601 aa13.38□□□□□ -0.27
SHPRH-201ENST00000275233 PPP1R7Q15435 360 aa13.38□□□□□ -0.27
SHPRH-201ENST00000275233 IPO4Q8TEX9 1081 aaKnown RBP13.38□□□□□ -0.27
SHPRH-201ENST00000275233 RBM28Q9NW13 759 aaKnown RBP13.38□□□□□ -0.27
SHPRH-201ENST00000275233 GGA1Q9UJY5 639 aa13.38□□□□□ -0.27
SHPRH-201ENST00000275233 GPATCH8Q9UKJ3 1502 aaKnown RBP13.38□□□□□ -0.27
SHPRH-201ENST00000275233 RHOXF2BP0C7M4 288 aa13.38□□□□□ -0.27
SHPRH-201ENST00000275233 SPAG1Q07617 926 aa13.38□□□□□ -0.27
SHPRH-201ENST00000275233 TTC6Q86TZ1 520 aa13.38□□□□□ -0.27
SHPRH-201ENST00000275233 FAM200AQ8TCP9 573 aa13.38□□□□□ -0.27
SHPRH-201ENST00000275233 MRRFQ96E11 262 aaKnown RBP13.38□□□□□ -0.27
SHPRH-201ENST00000275233 FNBP1Q96RU3 617 aa13.38□□□□□ -0.27
SHPRH-201ENST00000275233 RHOXF2Q9BQY4 288 aa13.38□□□□□ -0.27
SHPRH-201ENST00000275233 FRMD4BQ9Y2L6 1034 aa13.38□□□□□ -0.27
SHPRH-201ENST00000275233 SORBS3O60504 671 aa13.38□□□□□ -0.27
SHPRH-201ENST00000275233 PRIM1P49642 420 aaKnown RBP13.38□□□□□ -0.27
SHPRH-201ENST00000275233 MSL1Q68DK7 614 aa13.38□□□□□ -0.27
SHPRH-201ENST00000275233 SV2BQ7L1I2 683 aa13.38□□□□□ -0.27
SHPRH-201ENST00000275233 CPXCR1Q8N123 301 aa13.38□□□□□ -0.27
SHPRH-201ENST00000275233 RNF34Q969K3 372 aa13.38□□□□□ -0.27
SHPRH-201ENST00000275233 RNASE9P60153 205 aaKnown RBP13.38□□□□□ -0.27
SHPRH-201ENST00000275233 UAP1Q16222 522 aaPredicted RBP13.38□□□□□ -0.27
SHPRH-201ENST00000275233 TRAF5O00463 557 aa13.37□□□□□ -0.27
SHPRH-201ENST00000275233 ATRIPQ8WXE1 791 aa13.37□□□□□ -0.27
SHPRH-201ENST00000275233 XAGE2Q96GT9 111 aa13.37□□□□□ -0.27
SHPRH-201ENST00000275233 MYL10Q9BUA6 226 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms