RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 ZBTB12Q9Y330 459 aaPredicted RBP20.83■□□□□ 0.92
SKP2-201ENST00000274254 RPS12P25398 132 aaKnown RBP20.82■□□□□ 0.92
SKP2-201ENST00000274254 ADD2P35612 726 aa20.82■□□□□ 0.92
SKP2-201ENST00000274254 SLC9C2Q5TAH2 1124 aa20.82■□□□□ 0.92
SKP2-201ENST00000274254 TMED8Q6PL24 325 aaPredicted RBP20.82■□□□□ 0.92
SKP2-201ENST00000274254 KIAA0825Q8IV33 1275 aa20.82■□□□□ 0.92
SKP2-201ENST00000274254 TCRBV5S4A2TA0A5A2 114 aa20.81■□□□□ 0.92
SKP2-201ENST00000274254 ZFYP08048 801 aaPredicted RBP20.81■□□□□ 0.92
SKP2-201ENST00000274254 PDE6AP16499 860 aa20.81■□□□□ 0.92
SKP2-201ENST00000274254 LRRFIP1Q32MZ4 808 aaKnown RBP20.81■□□□□ 0.92
SKP2-201ENST00000274254 ZSCAN25Q6NSZ9 544 aa20.81■□□□□ 0.92
SKP2-201ENST00000274254 DZIP1Q86YF9 867 aaKnown RBP20.81■□□□□ 0.92
SKP2-201ENST00000274254 TTF2Q9UNY4 1162 aaKnown RBP20.81■□□□□ 0.92
SKP2-201ENST00000274254 GJA3Q9Y6H8 435 aa20.81■□□□□ 0.92
SKP2-201ENST00000274254 MAST3O60307 1309 aa20.8■□□□□ 0.92
SKP2-201ENST00000274254 RNF113AO15541 343 aaKnown RBP20.8■□□□□ 0.92
SKP2-201ENST00000274254 CHGBP05060 677 aa20.8■□□□□ 0.92
SKP2-201ENST00000274254 UBE3CQ15386 1083 aa20.8■□□□□ 0.92
SKP2-201ENST00000274254 MAGEB6Q8N7X4 407 aa20.8■□□□□ 0.92
SKP2-201ENST00000274254 DPF2Q92785 391 aa20.8■□□□□ 0.92
SKP2-201ENST00000274254 F8W031 263 aaPredicted RBP20.79■□□□□ 0.92
SKP2-201ENST00000274254 NAA16Q6N069 864 aaPredicted RBP20.79■□□□□ 0.92
SKP2-201ENST00000274254 MRIQ9BWK5 157 aa20.79■□□□□ 0.92
SKP2-201ENST00000274254 HIP1O00291 1037 aa20.78■□□□□ 0.92
SKP2-201ENST00000274254 DDNO94850 711 aaPredicted RBP20.78■□□□□ 0.92
SKP2-201ENST00000274254 CHMLP26374 656 aa20.78■□□□□ 0.92
SKP2-201ENST00000274254 GMPSP49915 693 aaPredicted RBP20.78■□□□□ 0.92
SKP2-201ENST00000274254 HDLBPQ00341 1268 aaKnown RBP20.78■□□□□ 0.92
SKP2-201ENST00000274254 SLFNL1Q499Z3 407 aa20.78■□□□□ 0.92
SKP2-201ENST00000274254 FAM163AQ96GL9 167 aaPredicted RBP20.78■□□□□ 0.92
SKP2-201ENST00000274254 MYH2Q9UKX2 1941 aa20.78■□□□□ 0.92
SKP2-201ENST00000274254 ZNF532Q9HCE3 1301 aa20.78■□□□□ 0.92
SKP2-201ENST00000274254 USP17L8P0C7I0 530 aa20.78■□□□□ 0.92
SKP2-201ENST00000274254 MMP14P50281 582 aa20.78■□□□□ 0.92
SKP2-201ENST00000274254 GSTO1P78417 241 aa20.78■□□□□ 0.92
SKP2-201ENST00000274254 DIXDC1Q155Q3 683 aa20.78■□□□□ 0.92
SKP2-201ENST00000274254 DPY19L2Q6NUT2 758 aa20.78■□□□□ 0.92
SKP2-201ENST00000274254 ADGRA1Q86SQ6 560 aa20.78■□□□□ 0.92
SKP2-201ENST00000274254 GAKO14976 1311 aa20.77■□□□□ 0.92
SKP2-201ENST00000274254 GLTPD2A6NH11 291 aa20.77■□□□□ 0.92
SKP2-201ENST00000274254 CDC45O75419 566 aa20.77■□□□□ 0.92
SKP2-201ENST00000274254 CYP7A1P22680 504 aa20.77■□□□□ 0.92
SKP2-201ENST00000274254 SCNN1DP51172 638 aa20.77■□□□□ 0.92
SKP2-201ENST00000274254 ZMYM1Q5SVZ6 1142 aa20.77■□□□□ 0.92
SKP2-201ENST00000274254 HHIPL2Q6UWX4 724 aa20.77■□□□□ 0.92
SKP2-201ENST00000274254 SLF2Q8IX21 1173 aa20.77■□□□□ 0.92
SKP2-201ENST00000274254 APPBP2Q92624 585 aa20.77■□□□□ 0.92
SKP2-201ENST00000274254 SERPINA10Q9UK55 444 aa20.77■□□□□ 0.92
SKP2-201ENST00000274254 ZNF280AP59817 542 aaPredicted RBP20.76■□□□□ 0.91
SKP2-201ENST00000274254 OGFOD1Q8N543 542 aa20.76■□□□□ 0.91
SKP2-201ENST00000274254 L3MBTL3Q96JM7 780 aaPredicted RBP20.76■□□□□ 0.91
SKP2-201ENST00000274254 FAM227BQ96M60 508 aa20.76■□□□□ 0.91
SKP2-201ENST00000274254 DIAPH3Q9NSV4 1193 aa20.76■□□□□ 0.91
SKP2-201ENST00000274254 HDAC9Q9UKV0 1011 aa20.76■□□□□ 0.91
SKP2-201ENST00000274254 MROH7-TTC4A0A0A0MT08 1334 aa20.76■□□□□ 0.91
SKP2-201ENST00000274254 LDHCP07864 332 aa20.75■□□□□ 0.91
SKP2-201ENST00000274254 CRKP46108 304 aa20.75■□□□□ 0.91
SKP2-201ENST00000274254 NMIQ13287 307 aaPredicted RBP20.75■□□□□ 0.91
SKP2-201ENST00000274254 OSBP2Q969R2 916 aa20.75■□□□□ 0.91
SKP2-201ENST00000274254 TEKT1Q969V4 418 aa20.75■□□□□ 0.91
SKP2-201ENST00000274254 GPRC5DQ9NZD1 345 aa20.75■□□□□ 0.91
SKP2-201ENST00000274254 ADAMTSL1Q8N6G6 1762 aa20.74■□□□□ 0.91
SKP2-201ENST00000274254 A0A0D9SFI3 127 aa20.74■□□□□ 0.91
SKP2-201ENST00000274254 SHTN1A0MZ66 631 aa20.74■□□□□ 0.91
SKP2-201ENST00000274254 MICALL2Q8IY33 904 aa20.74■□□□□ 0.91
SKP2-201ENST00000274254 ZDHHC15Q96MV8 337 aa20.74■□□□□ 0.91
SKP2-201ENST00000274254 PUS7LQ9H0K6 701 aaKnown RBP20.74■□□□□ 0.91
SKP2-201ENST00000274254 CNOT7Q9UIV1 285 aaKnown RBP20.74■□□□□ 0.91
SKP2-201ENST00000274254 DAGLAQ9Y4D2 1042 aa20.74■□□□□ 0.91
SKP2-201ENST00000274254 GPR75-ASB3A0A0A6YYF3 556 aa20.73■□□□□ 0.91
SKP2-201ENST00000274254 CWC27Q6UX04 472 aaKnown RBP20.73■□□□□ 0.91
SKP2-201ENST00000274254 SEC62Q99442 399 aaKnown RBP20.73■□□□□ 0.91
SKP2-201ENST00000274254 HELLSQ9NRZ9 838 aa20.73■□□□□ 0.91
SKP2-201ENST00000274254 APOBEC3HQ6NTF7 200 aaKnown RBP20.73■□□□□ 0.91
SKP2-201ENST00000274254 MTMR14Q8NCE2 650 aa20.73■□□□□ 0.91
SKP2-201ENST00000274254 PPP4CP60510 307 aa20.72■□□□□ 0.91
SKP2-201ENST00000274254 CFAP100Q494V2 611 aa20.72■□□□□ 0.91
SKP2-201ENST00000274254 MCMDC2Q4G0Z9 681 aa20.72■□□□□ 0.91
SKP2-201ENST00000274254 CASC1Q6TDU7 716 aa20.72■□□□□ 0.91
SKP2-201ENST00000274254 MIGA1Q8NAN2 632 aa20.72■□□□□ 0.91
SKP2-201ENST00000274254 RIOK1Q9BRS2 568 aaKnown RBP20.72■□□□□ 0.91
SKP2-201ENST00000274254 IL25Q9H293 177 aa20.72■□□□□ 0.91
SKP2-201ENST00000274254 MYOZ2Q9NPC6 264 aa20.72■□□□□ 0.91
SKP2-201ENST00000274254 PCDHAC2Q9Y5I4 1007 aa20.72■□□□□ 0.91
SKP2-201ENST00000274254 M0R2C6 588 aa20.71■□□□□ 0.91
SKP2-201ENST00000274254 RUFY2Q8WXA3 655 aa20.71■□□□□ 0.91
SKP2-201ENST00000274254 ZBED3Q96IU2 234 aaPredicted RBP20.71■□□□□ 0.91
SKP2-201ENST00000274254 RAD50Q92878 1312 aa20.71■□□□□ 0.91
SKP2-201ENST00000274254 WDR90Q96KV7 1748 aa20.71■□□□□ 0.91
SKP2-201ENST00000274254 SPDYE2BA6NHP3 402 aa20.7■□□□□ 0.9
SKP2-201ENST00000274254 H7C1D1 291 aa20.7■□□□□ 0.9
SKP2-201ENST00000274254 SGSM2O43147 1006 aa20.7■□□□□ 0.9
SKP2-201ENST00000274254 SPDYE6P0CI01 402 aa20.7■□□□□ 0.9
SKP2-201ENST00000274254 EPS15P42566 896 aa20.7■□□□□ 0.9
SKP2-201ENST00000274254 BTDP43251 543 aa20.7■□□□□ 0.9
SKP2-201ENST00000274254 C8orf34Q49A92 452 aa20.7■□□□□ 0.9
SKP2-201ENST00000274254 ESYT1Q9BSJ8 1104 aa20.7■□□□□ 0.9
SKP2-201ENST00000274254 AATFQ9NY61 560 aaKnown RBP eCLIP20.7■□□□□ 0.9
SKP2-201ENST00000274254 MAGEB6P1A0A0J9YX57 407 aa20.69■□□□□ 0.9
SKP2-201ENST00000274254 GPAA1O43292 621 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms