RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 ERLIN2O94905 339 aa10.1□□□□□ -0.79
CTDSPL-201ENST00000273179 ZNF24P17028 368 aa10.1□□□□□ -0.79
CTDSPL-201ENST00000273179 GUCY1B3Q02153 619 aa10.1□□□□□ -0.79
CTDSPL-201ENST00000273179 DHX8Q14562 1220 aaKnown RBP10.1□□□□□ -0.79
CTDSPL-201ENST00000273179 CAPRIN2Q6IMN6 1127 aaKnown RBP10.1□□□□□ -0.79
CTDSPL-201ENST00000273179 SLC4A10Q6U841 1118 aa10.1□□□□□ -0.79
CTDSPL-201ENST00000273179 JAKMIP2Q96AA8 810 aa10.1□□□□□ -0.79
CTDSPL-201ENST00000273179 CLMNQ96JQ2 1002 aa10.1□□□□□ -0.79
CTDSPL-201ENST00000273179 TTC12Q9H892 705 aaPredicted RBP10.1□□□□□ -0.79
CTDSPL-201ENST00000273179 TBC1D7Q9P0N9 293 aa10.1□□□□□ -0.79
CTDSPL-201ENST00000273179 MYL1P05976 194 aa10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 PECAM1P16284 738 aaPredicted RBP10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 USP4Q13107 963 aa10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 MUM1Q2TAK8 710 aa10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 FILIP1Q7Z7B0 1213 aa10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 ERP27Q96DN0 273 aa10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 DDX27Q96GQ7 796 aaKnown RBP10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 GSDMAQ96QA5 445 aa10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 HDAC6Q9UBN7 1215 aa10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 PPP1R12BO60237 982 aaPredicted RBP10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 DRAXINQ8NBI3 349 aaPredicted RBP10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 MSANTD4Q8NCY6 345 aa10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 TUBA8Q9NY65 449 aaPredicted RBP10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 KIAA1522Q9P206 1035 aaPredicted RBP10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 VIL1P09327 827 aaKnown RBP10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 AMPD3Q01432 767 aa10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 WHAMMP3Q1A5X7 153 aa10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 CPLX2Q6PUV4 134 aaKnown RBP10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 ATP6V0A1Q93050 837 aa10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 LUC7L2Q9Y383 392 aaKnown RBP10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 TRAPPC8Q9Y2L5 1435 aa10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 ZC3H6P61129 1189 aaKnown RBP10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 CCDC68Q9H2F9 335 aa10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 LUC7LQ9NQ29 371 aaKnown RBP10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 DMRT2Q9Y5R5 561 aa10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 CCDC141Q6ZP82 1450 aa10.09□□□□□ -0.79
CTDSPL-201ENST00000273179 OAS2P29728 719 aaKnown RBP10.08□□□□□ -0.8
CTDSPL-201ENST00000273179 CRYMQ14894 314 aa10.08□□□□□ -0.8
CTDSPL-201ENST00000273179 INAQ16352 499 aa10.08□□□□□ -0.8
CTDSPL-201ENST00000273179 CCDC110Q8TBZ0 833 aa10.08□□□□□ -0.8
CTDSPL-201ENST00000273179 SCYL1Q96KG9 808 aa10.08□□□□□ -0.8
CTDSPL-201ENST00000273179 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.08□□□□□ -0.8
CTDSPL-201ENST00000273179 ADGRL2O95490 1459 aa10.08□□□□□ -0.8
CTDSPL-201ENST00000273179 HPDP32754 393 aaPredicted RBP10.08□□□□□ -0.8
CTDSPL-201ENST00000273179 SF3B3Q15393 1217 aaKnown RBP10.08□□□□□ -0.8
CTDSPL-201ENST00000273179 SKIV2LQ15477 1246 aaKnown RBP10.08□□□□□ -0.8
CTDSPL-201ENST00000273179 CCDC144BQ3MJ40 725 aa10.08□□□□□ -0.8
CTDSPL-201ENST00000273179 SYCP2LQ5T4T6 812 aa10.08□□□□□ -0.8
CTDSPL-201ENST00000273179 SYCP3Q8IZU3 236 aa10.08□□□□□ -0.8
CTDSPL-201ENST00000273179 PDCD7Q8N8D1 485 aaKnown RBP10.08□□□□□ -0.8
CTDSPL-201ENST00000273179 CEP63Q96MT8 703 aa10.08□□□□□ -0.8
CTDSPL-201ENST00000273179 ZMAT5Q9UDW3 170 aaKnown RBP10.08□□□□□ -0.8
CTDSPL-201ENST00000273179 PSMC4P43686 418 aa10.08□□□□□ -0.8
CTDSPL-201ENST00000273179 SIX5Q8N196 739 aa10.08□□□□□ -0.8
CTDSPL-201ENST00000273179 ZNF397Q8NF99 534 aaPredicted RBP10.08□□□□□ -0.8
CTDSPL-201ENST00000273179 TSGA10Q9BZW7 698 aa10.08□□□□□ -0.8
CTDSPL-201ENST00000273179 MTA2O94776 668 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 EIF5P55010 431 aaKnown RBP10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 TUBA1BP68363 451 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 MAMSTRQ6ZN01 415 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 TUBA1AQ71U36 451 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 C3orf20Q8ND61 904 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 SPDL1Q96EA4 605 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 SYNCQ9H7C4 482 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 ABCC2Q92887 1545 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 FSD2A1L4K1 749 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 CUL4BQ13620 913 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 TTC39AQ5SRH9 613 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 TRIM68Q6AZZ1 485 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 GOLGA5Q8TBA6 731 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 CERKQ8TCT0 537 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 SMARCC1Q92922 1105 aaPredicted RBP10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 CDHR1Q96JP9 859 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 NLRP2Q9NX02 1062 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 TBX4P57082 545 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 SNX1Q13596 522 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 DSTYKQ6XUX3 929 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 ZFPM2Q8WW38 1151 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 MTUS1Q9ULD2 1270 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 DAAM1Q9Y4D1 1078 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 MAGED1Q9Y5V3 778 aaPredicted RBP10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 GOLGA6L7A0A1B0GV03 622 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 STMND1H3BQB6 276 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 MTRF1O75570 445 aaKnown RBP10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 ZNF449Q6P9G9 518 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 GFM2Q969S9 779 aaKnown RBP10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 SCINQ9Y6U3 715 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 CROCC2H7BZ55 1655 aa10.07□□□□□ -0.8
CTDSPL-201ENST00000273179 TROVE2P10155 538 aaKnown RBP eCLIP10.06□□□□□ -0.8
CTDSPL-201ENST00000273179 MCM2P49736 904 aa10.06□□□□□ -0.8
CTDSPL-201ENST00000273179 ZBED6P86452 979 aa10.06□□□□□ -0.8
CTDSPL-201ENST00000273179 STK3Q13188 491 aa10.06□□□□□ -0.8
CTDSPL-201ENST00000273179 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.06□□□□□ -0.8
CTDSPL-201ENST00000273179 EZH1Q92800 747 aaPredicted RBP10.06□□□□□ -0.8
CTDSPL-201ENST00000273179 RCAN3Q9UKA8 241 aa10.06□□□□□ -0.8
CTDSPL-201ENST00000273179 ADGBQ8N7X0 1667 aa10.06□□□□□ -0.8
CTDSPL-201ENST00000273179 TNIP1Q15025 636 aa10.06□□□□□ -0.8
CTDSPL-201ENST00000273179 ARHGAP22Q7Z5H3 698 aa10.06□□□□□ -0.8
CTDSPL-201ENST00000273179 RTF1Q92541 710 aaKnown RBP10.06□□□□□ -0.8
CTDSPL-201ENST00000273179 CTNNA3Q9UI47 895 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms