RNA–Protein interactions for RNA: ENST00000272371.6

OTOF-201, Transcript of otoferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene OTOF, Length 7,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-201ENST00000272371 MAP3K12Q12852 859 aa11.89□□□□□ -0.51
OTOF-201ENST00000272371 ZNF444Q8N0Y2 327 aaPredicted RBP11.89□□□□□ -0.51
OTOF-201ENST00000272371 NCOA7Q8NI08 942 aa11.89□□□□□ -0.51
OTOF-201ENST00000272371 TXNDC16Q9P2K2 825 aa11.89□□□□□ -0.51
OTOF-201ENST00000272371 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.89□□□□□ -0.51
OTOF-201ENST00000272371 FRMD3A2A2Y4 597 aa11.89□□□□□ -0.51
OTOF-201ENST00000272371 KIAA1524Q8TCG1 905 aa11.89□□□□□ -0.51
OTOF-201ENST00000272371 RUFY4Q6ZNE9 571 aa11.89□□□□□ -0.51
OTOF-201ENST00000272371 HGSO14964 777 aaPredicted RBP11.89□□□□□ -0.51
OTOF-201ENST00000272371 EEF2P13639 858 aaKnown RBP11.89□□□□□ -0.51
OTOF-201ENST00000272371 PRR16Q569H4 304 aa11.89□□□□□ -0.51
OTOF-201ENST00000272371 MTUS1Q9ULD2 1270 aa11.89□□□□□ -0.51
OTOF-201ENST00000272371 NSD3Q9BZ95 1437 aa11.89□□□□□ -0.51
OTOF-201ENST00000272371 PPFIA1Q13136 1202 aa11.89□□□□□ -0.51
OTOF-201ENST00000272371 DDX21Q9NR30 783 aaKnown RBP eCLIP11.89□□□□□ -0.51
OTOF-201ENST00000272371 COG7P83436 770 aa11.88□□□□□ -0.51
OTOF-201ENST00000272371 SDCCAG8Q86SQ7 713 aaPredicted RBP11.88□□□□□ -0.51
OTOF-201ENST00000272371 CCDC85AQ96PX6 553 aaPredicted RBP11.88□□□□□ -0.51
OTOF-201ENST00000272371 ALG1Q9BT22 464 aa11.88□□□□□ -0.51
OTOF-201ENST00000272371 PTPRCP08575 1304 aa11.88□□□□□ -0.51
OTOF-201ENST00000272371 TBCAO75347 108 aaKnown RBP11.88□□□□□ -0.51
OTOF-201ENST00000272371 C17orf53Q8N3J3 647 aaPredicted RBP11.88□□□□□ -0.51
OTOF-201ENST00000272371 RFC4P35249 363 aa11.88□□□□□ -0.51
OTOF-201ENST00000272371 MRPS9P82933 396 aaKnown RBP11.88□□□□□ -0.51
OTOF-201ENST00000272371 KRT28Q7Z3Y7 464 aa11.88□□□□□ -0.51
OTOF-201ENST00000272371 GOLGA5Q8TBA6 731 aa11.88□□□□□ -0.51
OTOF-201ENST00000272371 AMOTL2Q9Y2J4 779 aa11.88□□□□□ -0.51
OTOF-201ENST00000272371 GNAT3A8MTJ3 354 aa11.88□□□□□ -0.51
OTOF-201ENST00000272371 OPHN1O60890 802 aa11.88□□□□□ -0.51
OTOF-201ENST00000272371 SNCBQ16143 134 aa11.88□□□□□ -0.51
OTOF-201ENST00000272371 SEL1L2Q5TEA6 688 aa11.88□□□□□ -0.51
OTOF-201ENST00000272371 GPR161Q8N6U8 529 aaKnown RBP11.88□□□□□ -0.51
OTOF-201ENST00000272371 BICDL2A1A5D9 508 aa11.88□□□□□ -0.51
OTOF-201ENST00000272371 SDSP20132 328 aa11.88□□□□□ -0.51
OTOF-201ENST00000272371 RRS1Q15050 365 aaKnown RBP11.88□□□□□ -0.51
OTOF-201ENST00000272371 ANKRD24Q8TF21 1146 aa11.88□□□□□ -0.51
OTOF-201ENST00000272371 ZMAT2Q96NC0 199 aaKnown RBP11.88□□□□□ -0.51
OTOF-201ENST00000272371 MIS18AQ9NYP9 233 aa11.88□□□□□ -0.51
OTOF-201ENST00000272371 THOC2Q8NI27 1593 aaKnown RBP11.88□□□□□ -0.51
OTOF-201ENST00000272371 HSPA1LP34931 641 aa11.88□□□□□ -0.51
OTOF-201ENST00000272371 UAP1Q16222 522 aaPredicted RBP11.88□□□□□ -0.51
OTOF-201ENST00000272371 DHX58Q96C10 678 aa11.88□□□□□ -0.51
OTOF-201ENST00000272371 PLCB1Q9NQ66 1216 aa11.88□□□□□ -0.51
OTOF-201ENST00000272371 PLCB3Q01970 1234 aa11.87□□□□□ -0.51
OTOF-201ENST00000272371 SMIM24O75264 130 aa11.87□□□□□ -0.51
OTOF-201ENST00000272371 TRPC3Q13507 836 aa11.87□□□□□ -0.51
OTOF-201ENST00000272371 TSHZ3Q63HK5 1081 aa11.87□□□□□ -0.51
OTOF-201ENST00000272371 SPATS2Q86XZ4 545 aaKnown RBP11.87□□□□□ -0.51
OTOF-201ENST00000272371 ECHDC1Q9NTX5 307 aa11.87□□□□□ -0.51
OTOF-201ENST00000272371 TTF2Q9UNY4 1162 aaKnown RBP11.87□□□□□ -0.51
OTOF-201ENST00000272371 SPTLC2O15270 562 aa11.87□□□□□ -0.51
OTOF-201ENST00000272371 ATP6V0A2Q9Y487 856 aa11.87□□□□□ -0.51
OTOF-201ENST00000272371 RASSF2P50749 326 aa11.87□□□□□ -0.51
OTOF-201ENST00000272371 UTP14CQ5TAP6 766 aaKnown RBP11.87□□□□□ -0.51
OTOF-201ENST00000272371 RUFY3Q7L099 469 aa11.87□□□□□ -0.51
OTOF-201ENST00000272371 NUDT16Q96DE0 195 aaKnown RBP11.87□□□□□ -0.51
OTOF-201ENST00000272371 LRRD1A4D1F6 860 aa11.87□□□□□ -0.51
OTOF-201ENST00000272371 HDAC1Q13547 482 aaPredicted RBP11.87□□□□□ -0.51
OTOF-201ENST00000272371 TMOD2Q9NZR1 351 aa11.87□□□□□ -0.51
OTOF-201ENST00000272371 CLUL1Q15846 466 aa11.86□□□□□ -0.51
OTOF-201ENST00000272371 MORC4Q8TE76 937 aa11.86□□□□□ -0.51
OTOF-201ENST00000272371 FAF1Q9UNN5 650 aaPredicted RBP11.86□□□□□ -0.51
OTOF-201ENST00000272371 PPM1FP49593 454 aaPredicted RBP11.86□□□□□ -0.51
OTOF-201ENST00000272371 PSMD6Q15008 389 aa11.86□□□□□ -0.51
OTOF-201ENST00000272371 DBN1Q16643 649 aa11.86□□□□□ -0.51
OTOF-201ENST00000272371 CYP26C1Q6V0L0 522 aa11.86□□□□□ -0.51
OTOF-201ENST00000272371 KLF18A0A0U1RQI7 1052 aa11.86□□□□□ -0.51
OTOF-201ENST00000272371 STX17P56962 302 aa11.86□□□□□ -0.51
OTOF-201ENST00000272371 HAND2P61296 217 aa11.86□□□□□ -0.51
OTOF-201ENST00000272371 SATB1Q01826 763 aa11.86□□□□□ -0.51
OTOF-201ENST00000272371 ESYT1Q9BSJ8 1104 aa11.86□□□□□ -0.51
OTOF-201ENST00000272371 IMPACTQ9P2X3 320 aa11.86□□□□□ -0.51
OTOF-201ENST00000272371 F6X3S4 739 aa11.86□□□□□ -0.51
OTOF-201ENST00000272371 ACTN4O43707 911 aaKnown RBP11.86□□□□□ -0.51
OTOF-201ENST00000272371 LIG3P49916 1009 aa11.86□□□□□ -0.51
OTOF-201ENST00000272371 ASIC1P78348 528 aa11.86□□□□□ -0.51
OTOF-201ENST00000272371 CCDC14Q49A88 953 aa11.86□□□□□ -0.51
OTOF-201ENST00000272371 CAVIN4Q5BKX8 364 aa11.86□□□□□ -0.51
OTOF-201ENST00000272371 Q6ZUG5 572 aa11.86□□□□□ -0.51
OTOF-201ENST00000272371 CROCCP2Q86T23 111 aa11.86□□□□□ -0.51
OTOF-201ENST00000272371 VEZTQ9HBM0 779 aa11.86□□□□□ -0.51
OTOF-201ENST00000272371 BRF1Q92994 677 aa11.85□□□□□ -0.51
OTOF-201ENST00000272371 MYD88Q99836 296 aa11.85□□□□□ -0.51
OTOF-201ENST00000272371 THUMPD2Q9BTF0 503 aaKnown RBP11.85□□□□□ -0.51
OTOF-201ENST00000272371 FAM169AQ9Y6X4 670 aa11.85□□□□□ -0.51
OTOF-201ENST00000272371 IRX4P78413 519 aa11.85□□□□□ -0.51
OTOF-201ENST00000272371 MYL5Q02045 173 aa11.85□□□□□ -0.51
OTOF-201ENST00000272371 PPANQ9NQ55 473 aaKnown RBP11.85□□□□□ -0.51
OTOF-201ENST00000272371 HIP1RO75146 1068 aa11.85□□□□□ -0.51
OTOF-201ENST00000272371 IDI1Q13907 227 aa11.85□□□□□ -0.51
OTOF-201ENST00000272371 TRIM14Q14142 442 aa11.85□□□□□ -0.51
OTOF-201ENST00000272371 MFSD6Q6ZSS7 791 aa11.85□□□□□ -0.51
OTOF-201ENST00000272371 ZNF75DP51815 510 aa11.85□□□□□ -0.51
OTOF-201ENST00000272371 PARP3Q9Y6F1 533 aa11.85□□□□□ -0.51
OTOF-201ENST00000272371 PPFIA4O75335 1185 aa11.85□□□□□ -0.51
OTOF-201ENST00000272371 GNGT1P63211 74 aa11.85□□□□□ -0.51
OTOF-201ENST00000272371 KAT14Q9H8E8 782 aa11.85□□□□□ -0.51
OTOF-201ENST00000272371 NBPF7P0C2Y1 421 aaPredicted RBP11.84□□□□□ -0.51
OTOF-201ENST00000272371 ERCC5P28715 1186 aaPredicted RBP11.84□□□□□ -0.51
OTOF-201ENST00000272371 ZNF652Q9Y2D9 606 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms