RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 BLMP54132 1417 aaPredicted RBP8.93□□□□□ -0.98
USP3-201ENST00000268049 ERLIN2O94905 339 aa8.93□□□□□ -0.98
USP3-201ENST00000268049 KCNA4P22459 653 aa8.93□□□□□ -0.98
USP3-201ENST00000268049 RABEP1Q15276 862 aa8.93□□□□□ -0.98
USP3-201ENST00000268049 CCDC91Q7Z6B0 441 aa8.93□□□□□ -0.98
USP3-201ENST00000268049 ABI1Q8IZP0 508 aa8.93□□□□□ -0.98
USP3-201ENST00000268049 ZNHIT6Q9NWK9 470 aaKnown RBP8.93□□□□□ -0.98
USP3-201ENST00000268049 EXOC6BQ9Y2D4 811 aa8.93□□□□□ -0.98
USP3-201ENST00000268049 VGLL3A8MV65 326 aa8.93□□□□□ -0.98
USP3-201ENST00000268049 ZNF213O14771 459 aa8.93□□□□□ -0.98
USP3-201ENST00000268049 PDE8AO60658 829 aa8.93□□□□□ -0.98
USP3-201ENST00000268049 FOSBP53539 338 aa8.93□□□□□ -0.98
USP3-201ENST00000268049 IGSF1Q8N6C5 1336 aa8.93□□□□□ -0.98
USP3-201ENST00000268049 GRM8O00222 908 aa8.93□□□□□ -0.98
USP3-201ENST00000268049 KDM4AO75164 1064 aa8.93□□□□□ -0.98
USP3-201ENST00000268049 GBP2P32456 591 aaPredicted RBP8.93□□□□□ -0.98
USP3-201ENST00000268049 IL15P40933 162 aaPredicted RBP8.93□□□□□ -0.98
USP3-201ENST00000268049 SARNPP82979 210 aaKnown RBP8.93□□□□□ -0.98
USP3-201ENST00000268049 PTPN14Q15678 1187 aa8.93□□□□□ -0.98
USP3-201ENST00000268049 CDAN1Q8IWY9 1227 aa8.93□□□□□ -0.98
USP3-201ENST00000268049 RGS22Q8NE09 1264 aa8.93□□□□□ -0.98
USP3-201ENST00000268049 CRACR2AQ9BSW2 395 aa8.93□□□□□ -0.98
USP3-201ENST00000268049 MAGEB6P1A0A0J9YX57 407 aa8.92□□□□□ -0.98
USP3-201ENST00000268049 KINO60870 393 aaKnown RBP8.92□□□□□ -0.98
USP3-201ENST00000268049 SMC1AQ14683 1233 aaKnown RBP8.92□□□□□ -0.98
USP3-201ENST00000268049 KRT24Q2M2I5 525 aa8.92□□□□□ -0.98
USP3-201ENST00000268049 HS1BP3Q53T59 392 aa8.92□□□□□ -0.98
USP3-201ENST00000268049 PLBD2Q8NHP8 589 aa8.92□□□□□ -0.98
USP3-201ENST00000268049 TRIM6Q9C030 488 aaPredicted RBP8.92□□□□□ -0.98
USP3-201ENST00000268049 GLT8D2Q9H1C3 349 aa8.92□□□□□ -0.98
USP3-201ENST00000268049 SLC12A7Q9Y666 1083 aa8.92□□□□□ -0.98
USP3-201ENST00000268049 CYP46A1Q9Y6A2 500 aa8.92□□□□□ -0.98
USP3-201ENST00000268049 DIP2AQ14689 1571 aa8.92□□□□□ -0.98
USP3-201ENST00000268049 FGFR1OPO95684 399 aaKnown RBP8.92□□□□□ -0.98
USP3-201ENST00000268049 SERPINB2P05120 415 aa8.92□□□□□ -0.98
USP3-201ENST00000268049 LMAN1P49257 510 aa8.92□□□□□ -0.98
USP3-201ENST00000268049 STK38Q15208 465 aa8.92□□□□□ -0.98
USP3-201ENST00000268049 KIF18AQ8NI77 898 aa8.92□□□□□ -0.98
USP3-201ENST00000268049 MASTLQ96GX5 879 aa8.92□□□□□ -0.98
USP3-201ENST00000268049 SOS2Q07890 1332 aaPredicted RBP8.92□□□□□ -0.98
USP3-201ENST00000268049 RAB3GAP1Q15042 981 aa8.92□□□□□ -0.98
USP3-201ENST00000268049 MFSD6Q6ZSS7 791 aa8.92□□□□□ -0.98
USP3-201ENST00000268049 KIAA1328Q86T90 577 aa8.92□□□□□ -0.98
USP3-201ENST00000268049 APOBEC3FQ8IUX4 373 aaKnown RBP8.92□□□□□ -0.98
USP3-201ENST00000268049 KRT23Q9C075 422 aa8.92□□□□□ -0.98
USP3-201ENST00000268049 HAUS2Q9NVX0 235 aa8.92□□□□□ -0.98
USP3-201ENST00000268049 ASAP1Q9ULH1 1129 aa8.92□□□□□ -0.98
USP3-201ENST00000268049 MYO3BQ8WXR4 1341 aa8.92□□□□□ -0.98
USP3-201ENST00000268049 DCCP43146 1447 aa8.92□□□□□ -0.98
USP3-201ENST00000268049 PTPRUQ92729 1446 aa8.92□□□□□ -0.98
USP3-201ENST00000268049 HMGB1P09429 215 aaKnown RBP8.92□□□□□ -0.98
USP3-201ENST00000268049 RNF187Q5TA31 235 aaPredicted RBP8.92□□□□□ -0.98
USP3-201ENST00000268049 FAM177A1Q8N128 213 aaPredicted RBP8.92□□□□□ -0.98
USP3-201ENST00000268049 IMPG2Q9BZV3 1241 aa8.92□□□□□ -0.98
USP3-201ENST00000268049 AXIN2Q9Y2T1 843 aa8.92□□□□□ -0.98
USP3-201ENST00000268049 BCORL1Q5H9F3 1711 aa8.92□□□□□ -0.98
USP3-201ENST00000268049 TRIM27P14373 513 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 SLC8A3P57103 927 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 ENOX2Q16206 610 aaKnown RBP8.91□□□□□ -0.98
USP3-201ENST00000268049 CCDC181Q5TID7 509 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 LMBR1LQ6UX01 489 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 STX8Q9UNK0 236 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 FIBPO43427 364 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 ANAPC15P60006 121 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 TTC31Q49AM3 519 aaPredicted RBP8.91□□□□□ -0.98
USP3-201ENST00000268049 IQCEQ6IPM2 695 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 IL17REQ8NFR9 667 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 ARHGAP45Q92619 1136 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 CNNM2Q9H8M5 875 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 SETBP1Q9Y6X0 1596 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 DLC1Q96QB1 1528 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 CHL1O00533 1208 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 TBCAO75347 108 aaKnown RBP8.91□□□□□ -0.98
USP3-201ENST00000268049 IVLP07476 585 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 MCM2P49736 904 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 ARID5AQ03989 594 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 CPSF2Q9P2I0 782 aaKnown RBP8.91□□□□□ -0.98
USP3-201ENST00000268049 BBOX1O75936 387 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 MRPS9P82933 396 aaKnown RBP8.91□□□□□ -0.98
USP3-201ENST00000268049 ZNF354CQ86Y25 554 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 TMTC2Q8N394 836 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 CALML4Q96GE6 196 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 RASSF4Q9H2L5 321 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 ZFYVE28Q9HCC9 887 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 COMMD10Q9Y6G5 202 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 OVOS2A0A0G2JMS6 1433 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 OVOS2A0A0J9YW53 1432 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 OVOS2Q6IE36 1432 aa8.91□□□□□ -0.98
USP3-201ENST00000268049 ESR2Q92731 530 aa8.9□□□□□ -0.98
USP3-201ENST00000268049 CRB1P82279 1406 aa8.9□□□□□ -0.98
USP3-201ENST00000268049 CEP57L1Q8IYX8 460 aa8.9□□□□□ -0.98
USP3-201ENST00000268049 SYCP3Q8IZU3 236 aa8.9□□□□□ -0.98
USP3-201ENST00000268049 TSPYL6Q8N831 410 aa8.9□□□□□ -0.98
USP3-201ENST00000268049 KCNG1Q9UIX4 513 aa8.9□□□□□ -0.98
USP3-201ENST00000268049 IFIT3O14879 490 aaKnown RBP8.9□□□□□ -0.98
USP3-201ENST00000268049 VAMP4O75379 141 aa8.9□□□□□ -0.98
USP3-201ENST00000268049 EIF4A1P60842 406 aaKnown RBP8.9□□□□□ -0.98
USP3-201ENST00000268049 GNPTABQ3T906 1256 aa8.9□□□□□ -0.98
USP3-201ENST00000268049 TAX1BP1Q86VP1 789 aa8.9□□□□□ -0.98
USP3-201ENST00000268049 SMC1BQ8NDV3 1235 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms