RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 KIF23Q02241 960 aaPredicted RBP19.6■□□□□ 0.73
RTN1-201ENST00000267484 RALYLQ86SE5 291 aaKnown RBP19.6■□□□□ 0.73
RTN1-201ENST00000267484 PHKBQ93100 1093 aa19.6■□□□□ 0.73
RTN1-201ENST00000267484 ERO1AQ96HE7 468 aa19.6■□□□□ 0.73
RTN1-201ENST00000267484 GPR108Q9NPR9 543 aa19.6■□□□□ 0.73
RTN1-201ENST00000267484 CCDC158Q5M9N0 1113 aa19.6■□□□□ 0.73
RTN1-201ENST00000267484 CLIC6Q96NY7 704 aa19.6■□□□□ 0.73
RTN1-201ENST00000267484 ABCC6O95255 1503 aa19.59■□□□□ 0.73
RTN1-201ENST00000267484 NLRP12P59046 1061 aa19.59■□□□□ 0.73
RTN1-201ENST00000267484 MORC2Q9Y6X9 1032 aaPredicted RBP19.59■□□□□ 0.73
RTN1-201ENST00000267484 FANCCQ00597 558 aa19.59■□□□□ 0.73
RTN1-201ENST00000267484 FAM89AQ96GI7 184 aa19.59■□□□□ 0.73
RTN1-201ENST00000267484 INCENPQ9NQS7 918 aa19.59■□□□□ 0.73
RTN1-201ENST00000267484 YEATS4O95619 227 aa19.58■□□□□ 0.73
RTN1-201ENST00000267484 PNOCQ13519 176 aa19.58■□□□□ 0.73
RTN1-201ENST00000267484 CCDC57Q2TAC2 916 aa19.58■□□□□ 0.73
RTN1-201ENST00000267484 GPAA1O43292 621 aa19.58■□□□□ 0.73
RTN1-201ENST00000267484 EVCP57679 992 aa19.58■□□□□ 0.73
RTN1-201ENST00000267484 HOMER1Q86YM7 354 aa19.58■□□□□ 0.73
RTN1-201ENST00000267484 STK11IPQ8N1F8 1099 aa19.58■□□□□ 0.73
RTN1-201ENST00000267484 MYL10Q9BUA6 226 aa19.58■□□□□ 0.73
RTN1-201ENST00000267484 HSD3B7Q9H2F3 369 aa19.58■□□□□ 0.73
RTN1-201ENST00000267484 ZNF446Q9NWS9 450 aa19.58■□□□□ 0.73
RTN1-201ENST00000267484 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.58■□□□□ 0.73
RTN1-201ENST00000267484 ZNF213O14771 459 aa19.58■□□□□ 0.72
RTN1-201ENST00000267484 NCOA7Q8NI08 942 aa19.58■□□□□ 0.72
RTN1-201ENST00000267484 SPECC1Q5M775 1068 aa19.57■□□□□ 0.72
RTN1-201ENST00000267484 KIF20AO95235 890 aa19.57■□□□□ 0.72
RTN1-201ENST00000267484 IMPACTQ9P2X3 320 aa19.57■□□□□ 0.72
RTN1-201ENST00000267484 NBPF3Q9H094 633 aa19.57■□□□□ 0.72
RTN1-201ENST00000267484 NWD2Q9ULI1 1742 aa19.57■□□□□ 0.72
RTN1-201ENST00000267484 C1orf167Q5SNV9 1468 aa19.56■□□□□ 0.72
RTN1-201ENST00000267484 TMEM232C9JQI7 657 aa19.56■□□□□ 0.72
RTN1-201ENST00000267484 SLFN14P0C7P3 912 aa19.56■□□□□ 0.72
RTN1-201ENST00000267484 SYKP43405 635 aa19.56■□□□□ 0.72
RTN1-201ENST00000267484 CYB5R4Q7L1T6 521 aa19.56■□□□□ 0.72
RTN1-201ENST00000267484 MICU3Q86XE3 530 aa19.56■□□□□ 0.72
RTN1-201ENST00000267484 FAM177A1Q8N128 213 aaPredicted RBP19.56■□□□□ 0.72
RTN1-201ENST00000267484 ALG1Q9BT22 464 aa19.56■□□□□ 0.72
RTN1-201ENST00000267484 TRPM3Q9HCF6 1732 aaPredicted RBP19.56■□□□□ 0.72
RTN1-201ENST00000267484 DHX16O60231 1041 aaKnown RBP19.56■□□□□ 0.72
RTN1-201ENST00000267484 APPP05067 770 aa19.56■□□□□ 0.72
RTN1-201ENST00000267484 TAF7LQ5H9L4 462 aa19.56■□□□□ 0.72
RTN1-201ENST00000267484 TMX1Q9H3N1 280 aa19.56■□□□□ 0.72
RTN1-201ENST00000267484 DNAI1Q9UI46 699 aa19.56■□□□□ 0.72
RTN1-201ENST00000267484 SHC4Q6S5L8 630 aa19.56■□□□□ 0.72
RTN1-201ENST00000267484 BRAPQ7Z569 592 aa19.56■□□□□ 0.72
RTN1-201ENST00000267484 VPS37DQ86XT2 251 aa19.56■□□□□ 0.72
RTN1-201ENST00000267484 TBC1D10CQ8IV04 446 aa19.56■□□□□ 0.72
RTN1-201ENST00000267484 KRT222Q8N1A0 295 aa19.56■□□□□ 0.72
RTN1-201ENST00000267484 CCDC191Q8NCU4 936 aa19.56■□□□□ 0.72
RTN1-201ENST00000267484 CCDC150Q8NCX0 1101 aa19.56■□□□□ 0.72
RTN1-201ENST00000267484 CMA1P23946 247 aa19.55■□□□□ 0.72
RTN1-201ENST00000267484 CDC27P30260 824 aa19.55■□□□□ 0.72
RTN1-201ENST00000267484 FOXN1O15353 648 aa19.55■□□□□ 0.72
RTN1-201ENST00000267484 SERPINC1P01008 464 aa19.55■□□□□ 0.72
RTN1-201ENST00000267484 GNL2Q13823 731 aaKnown RBP19.55■□□□□ 0.72
RTN1-201ENST00000267484 APPBP2Q92624 585 aa19.55■□□□□ 0.72
RTN1-201ENST00000267484 A0A0U1RQG5 324 aaPredicted RBP19.54■□□□□ 0.72
RTN1-201ENST00000267484 FANCGO15287 622 aa19.54■□□□□ 0.72
RTN1-201ENST00000267484 CFAP100Q494V2 611 aa19.54■□□□□ 0.72
RTN1-201ENST00000267484 KRT40Q6A162 431 aa19.54■□□□□ 0.72
RTN1-201ENST00000267484 BPIFA3Q9BQP9 254 aa19.54■□□□□ 0.72
RTN1-201ENST00000267484 B4E1Z4 1266 aa19.54■□□□□ 0.72
RTN1-201ENST00000267484 UBASH3AP57075 661 aa19.54■□□□□ 0.72
RTN1-201ENST00000267484 TPM4P67936 248 aa19.54■□□□□ 0.72
RTN1-201ENST00000267484 SLC39A14Q15043 492 aa19.54■□□□□ 0.72
RTN1-201ENST00000267484 CIAO1O76071 339 aa19.53■□□□□ 0.72
RTN1-201ENST00000267484 MCAMP43121 646 aa19.53■□□□□ 0.72
RTN1-201ENST00000267484 UTP14AQ9BVJ6 771 aaKnown RBP19.53■□□□□ 0.72
RTN1-201ENST00000267484 METAP2P50579 478 aaKnown RBP eCLIP19.53■□□□□ 0.72
RTN1-201ENST00000267484 FBXL16Q8N461 479 aa19.53■□□□□ 0.72
RTN1-201ENST00000267484 EPC1Q9H2F5 836 aa19.53■□□□□ 0.72
RTN1-201ENST00000267484 IDH1O75874 414 aaKnown RBP19.52■□□□□ 0.72
RTN1-201ENST00000267484 SLC9C2Q5TAH2 1124 aa19.52■□□□□ 0.72
RTN1-201ENST00000267484 FOXP4Q8IVH2 680 aaPredicted RBP19.52■□□□□ 0.72
RTN1-201ENST00000267484 L2HGDHQ9H9P8 463 aa19.52■□□□□ 0.72
RTN1-201ENST00000267484 FANCLQ9NW38 375 aa19.52■□□□□ 0.72
RTN1-201ENST00000267484 LONRF3Q496Y0 759 aa19.52■□□□□ 0.72
RTN1-201ENST00000267484 ARHGAP29Q52LW3 1261 aa19.52■□□□□ 0.72
RTN1-201ENST00000267484 KCND1Q9NSA2 647 aa19.52■□□□□ 0.72
RTN1-201ENST00000267484 LMTK3Q96Q04 1460 aa19.52■□□□□ 0.71
RTN1-201ENST00000267484 TERF2Q15554 542 aa19.51■□□□□ 0.71
RTN1-201ENST00000267484 C19orf44Q9H6X5 657 aa19.51■□□□□ 0.71
RTN1-201ENST00000267484 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.51■□□□□ 0.71
RTN1-201ENST00000267484 GPTP24298 496 aa19.51■□□□□ 0.71
RTN1-201ENST00000267484 PDE4BQ07343 736 aa19.51■□□□□ 0.71
RTN1-201ENST00000267484 GLI3P10071 1580 aa19.51■□□□□ 0.71
RTN1-201ENST00000267484 PSDA5PKW4 1024 aaPredicted RBP19.51■□□□□ 0.71
RTN1-201ENST00000267484 ERICH4A6NGS2 130 aa19.51■□□□□ 0.71
RTN1-201ENST00000267484 GABPB1Q06547 395 aaPredicted RBP19.51■□□□□ 0.71
RTN1-201ENST00000267484 TRDNQ13061 729 aa19.51■□□□□ 0.71
RTN1-201ENST00000267484 CCDC93Q567U6 631 aa19.51■□□□□ 0.71
RTN1-201ENST00000267484 CCDC82Q8N4S0 544 aa19.51■□□□□ 0.71
RTN1-201ENST00000267484 ANGEL1Q9UNK9 670 aaKnown RBP19.51■□□□□ 0.71
RTN1-201ENST00000267484 KIF2AO00139 706 aaPredicted RBP19.5■□□□□ 0.71
RTN1-201ENST00000267484 CLCN6P51797 869 aa19.5■□□□□ 0.71
RTN1-201ENST00000267484 METTL16Q86W50 562 aaKnown RBP19.5■□□□□ 0.71
RTN1-201ENST00000267484 ZFYP08048 801 aaPredicted RBP19.5■□□□□ 0.71
RTN1-201ENST00000267484 TRHP20396 242 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms