RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 SLC52A2Q9HAB3 445 aa13.16□□□□□ -0.3
VPS33A-201ENST00000267199 SLC4A4Q9Y6R1 1079 aa13.16□□□□□ -0.3
VPS33A-201ENST00000267199 NEURL1BA8MQ27 555 aa13.16□□□□□ -0.3
VPS33A-201ENST00000267199 MYO1BO43795 1136 aa13.16□□□□□ -0.3
VPS33A-201ENST00000267199 ZEB2O60315 1214 aa13.16□□□□□ -0.3
VPS33A-201ENST00000267199 WDHD1O75717 1129 aaPredicted RBP13.16□□□□□ -0.3
VPS33A-201ENST00000267199 PROSER3Q2NL68 480 aa13.16□□□□□ -0.3
VPS33A-201ENST00000267199 SEC62Q99442 399 aaKnown RBP13.16□□□□□ -0.3
VPS33A-201ENST00000267199 EBAG9O00559 213 aa13.16□□□□□ -0.3
VPS33A-201ENST00000267199 ABCA6Q8N139 1617 aa13.15□□□□□ -0.3
VPS33A-201ENST00000267199 AKR1B10O60218 316 aa13.15□□□□□ -0.3
VPS33A-201ENST00000267199 ADAMTS2O95450 1211 aa13.15□□□□□ -0.3
VPS33A-201ENST00000267199 SLC4A8Q2Y0W8 1093 aa13.15□□□□□ -0.3
VPS33A-201ENST00000267199 MICALCLQ6ZW33 695 aa13.15□□□□□ -0.3
VPS33A-201ENST00000267199 BRAPQ7Z569 592 aa13.15□□□□□ -0.3
VPS33A-201ENST00000267199 NBPF11Q86T75 865 aa13.15□□□□□ -0.3
VPS33A-201ENST00000267199 DYDC1Q8WWB3 177 aa13.15□□□□□ -0.3
VPS33A-201ENST00000267199 KRT23Q9C075 422 aa13.15□□□□□ -0.3
VPS33A-201ENST00000267199 ATP5JP18859 108 aa13.15□□□□□ -0.3
VPS33A-201ENST00000267199 CYP7A1P22680 504 aa13.15□□□□□ -0.3
VPS33A-201ENST00000267199 KANK3Q6NY19 840 aa13.15□□□□□ -0.3
VPS33A-201ENST00000267199 LLPHQ9BRT6 129 aaKnown RBP13.15□□□□□ -0.3
VPS33A-201ENST00000267199 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.15□□□□□ -0.3
VPS33A-201ENST00000267199 FBXO3Q9UK99 471 aa13.15□□□□□ -0.3
VPS33A-201ENST00000267199 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.15□□□□□ -0.3
VPS33A-201ENST00000267199 CACTINQ8WUQ7 758 aaKnown RBP13.15□□□□□ -0.31
VPS33A-201ENST00000267199 TRIM47Q96LD4 638 aa13.15□□□□□ -0.31
VPS33A-201ENST00000267199 CDC5LQ99459 802 aaKnown RBP13.15□□□□□ -0.31
VPS33A-201ENST00000267199 GOPCQ9HD26 462 aa13.15□□□□□ -0.31
VPS33A-201ENST00000267199 BMP2KQ9NSY1 1161 aaPredicted RBP13.15□□□□□ -0.31
VPS33A-201ENST00000267199 USP6P35125 1406 aa13.14□□□□□ -0.31
VPS33A-201ENST00000267199 TSPY2A6NKD2 308 aa13.14□□□□□ -0.31
VPS33A-201ENST00000267199 PPARDQ03181 441 aa13.14□□□□□ -0.31
VPS33A-201ENST00000267199 ATL3Q6DD88 541 aa13.14□□□□□ -0.31
VPS33A-201ENST00000267199 CTDP1Q9Y5B0 961 aaPredicted RBP13.14□□□□□ -0.31
VPS33A-201ENST00000267199 IDEP14735 1019 aa13.14□□□□□ -0.31
VPS33A-201ENST00000267199 SYCP1Q15431 976 aa13.14□□□□□ -0.31
VPS33A-201ENST00000267199 ZSCAN26Q16670 478 aa13.14□□□□□ -0.31
VPS33A-201ENST00000267199 UTP14CQ5TAP6 766 aaKnown RBP13.14□□□□□ -0.31
VPS33A-201ENST00000267199 HDXQ7Z353 690 aa13.14□□□□□ -0.31
VPS33A-201ENST00000267199 CNNM2Q9H8M5 875 aa13.14□□□□□ -0.31
VPS33A-201ENST00000267199 CCDC96Q2M329 555 aa13.14□□□□□ -0.31
VPS33A-201ENST00000267199 LRRC8AQ8IWT6 810 aa13.14□□□□□ -0.31
VPS33A-201ENST00000267199 ZNF444Q8N0Y2 327 aaPredicted RBP13.14□□□□□ -0.31
VPS33A-201ENST00000267199 KIF2CQ99661 725 aa13.14□□□□□ -0.31
VPS33A-201ENST00000267199 IRS4O14654 1257 aaPredicted RBP13.13□□□□□ -0.31
VPS33A-201ENST00000267199 IL2RBP14784 551 aa13.13□□□□□ -0.31
VPS33A-201ENST00000267199 UBA7P41226 1012 aa13.13□□□□□ -0.31
VPS33A-201ENST00000267199 ESR2Q92731 530 aa13.13□□□□□ -0.31
VPS33A-201ENST00000267199 HECW2Q9P2P5 1572 aa13.13□□□□□ -0.31
VPS33A-201ENST00000267199 CHMP4BP1P59074 171 aa13.13□□□□□ -0.31
VPS33A-201ENST00000267199 SMC1AQ14683 1233 aaKnown RBP13.13□□□□□ -0.31
VPS33A-201ENST00000267199 NAA30Q147X3 362 aaPredicted RBP13.13□□□□□ -0.31
VPS33A-201ENST00000267199 MEX3CQ5U5Q3 659 aaKnown RBP13.13□□□□□ -0.31
VPS33A-201ENST00000267199 GLI2P10070 1586 aa13.13□□□□□ -0.31
VPS33A-201ENST00000267199 B4E1Z4 1266 aa13.13□□□□□ -0.31
VPS33A-201ENST00000267199 HSF2BPO75031 334 aa13.13□□□□□ -0.31
VPS33A-201ENST00000267199 CEP57Q86XR8 500 aa13.13□□□□□ -0.31
VPS33A-201ENST00000267199 TMTC2Q8N394 836 aa13.13□□□□□ -0.31
VPS33A-201ENST00000267199 GDAP1L1Q96MZ0 367 aa13.13□□□□□ -0.31
VPS33A-201ENST00000267199 MRVI1Q9Y6F6 885 aa13.13□□□□□ -0.31
VPS33A-201ENST00000267199 LAMC1P11047 1609 aa13.13□□□□□ -0.31
VPS33A-201ENST00000267199 TMCO5BA8MYB1 307 aa13.13□□□□□ -0.31
VPS33A-201ENST00000267199 PIP4K2BP78356 416 aa13.13□□□□□ -0.31
VPS33A-201ENST00000267199 LONRF3Q496Y0 759 aa13.13□□□□□ -0.31
VPS33A-201ENST00000267199 MIGA1Q8NAN2 632 aa13.13□□□□□ -0.31
VPS33A-201ENST00000267199 ALS2CR12Q96Q35 445 aa13.13□□□□□ -0.31
VPS33A-201ENST00000267199 CCT6AP40227 531 aaKnown RBP13.12□□□□□ -0.31
VPS33A-201ENST00000267199 MAP2K1Q02750 393 aaPredicted RBP13.12□□□□□ -0.31
VPS33A-201ENST00000267199 XAGE2Q96GT9 111 aa13.12□□□□□ -0.31
VPS33A-201ENST00000267199 KDRP35968 1356 aa13.12□□□□□ -0.31
VPS33A-201ENST00000267199 PNPLA6Q8IY17 1366 aa13.12□□□□□ -0.31
VPS33A-201ENST00000267199 GPAA1O43292 621 aa13.12□□□□□ -0.31
VPS33A-201ENST00000267199 MAGEB6Q8N7X4 407 aa13.12□□□□□ -0.31
VPS33A-201ENST00000267199 MAP4K1Q92918 833 aa13.12□□□□□ -0.31
VPS33A-201ENST00000267199 ZKSCAN3Q9BRR0 538 aa13.12□□□□□ -0.31
VPS33A-201ENST00000267199 TLR7Q9NYK1 1049 aaKnown RBP13.12□□□□□ -0.31
VPS33A-201ENST00000267199 ANKIB1Q9P2G1 1089 aa13.12□□□□□ -0.31
VPS33A-201ENST00000267199 CFAP74Q9C0B2 1584 aa13.12□□□□□ -0.31
VPS33A-201ENST00000267199 APPBP2Q92624 585 aa13.12□□□□□ -0.31
VPS33A-201ENST00000267199 SEC63Q9UGP8 760 aaKnown RBP13.12□□□□□ -0.31
VPS33A-201ENST00000267199 TRIM75PA6NK02 468 aa13.12□□□□□ -0.31
VPS33A-201ENST00000267199 ZNF202O95125 648 aa13.12□□□□□ -0.31
VPS33A-201ENST00000267199 MTX1Q13505 466 aa13.12□□□□□ -0.31
VPS33A-201ENST00000267199 CCDC152Q4G0S7 254 aa13.12□□□□□ -0.31
VPS33A-201ENST00000267199 ANO1Q5XXA6 986 aa13.12□□□□□ -0.31
VPS33A-201ENST00000267199 CPSF1Q10570 1443 aaKnown RBP13.11□□□□□ -0.31
VPS33A-201ENST00000267199 PRAMEF22A3QJZ6 481 aa13.11□□□□□ -0.31
VPS33A-201ENST00000267199 CKAP4Q07065 602 aaKnown RBP13.11□□□□□ -0.31
VPS33A-201ENST00000267199 NAA16Q6N069 864 aaPredicted RBP13.11□□□□□ -0.31
VPS33A-201ENST00000267199 OTUD6BQ8N6M0 293 aa13.11□□□□□ -0.31
VPS33A-201ENST00000267199 PDLIM2Q96JY6 352 aa13.11□□□□□ -0.31
VPS33A-201ENST00000267199 ARAP3Q8WWN8 1544 aa13.11□□□□□ -0.31
VPS33A-201ENST00000267199 NOP2P46087 812 aaKnown RBP13.11□□□□□ -0.31
VPS33A-201ENST00000267199 IFIT1BQ5T764 474 aaKnown RBP13.11□□□□□ -0.31
VPS33A-201ENST00000267199 USP28Q96RU2 1077 aa13.11□□□□□ -0.31
VPS33A-201ENST00000267199 E7EWF7 191 aa13.11□□□□□ -0.31
VPS33A-201ENST00000267199 CTAGE1Q96RT6 745 aa13.11□□□□□ -0.31
VPS33A-201ENST00000267199 AKR1B15C9JRZ8 316 aaPredicted RBP13.1□□□□□ -0.31
VPS33A-201ENST00000267199 ZPR1O75312 459 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms