RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 DOK7Q18PE1 504 aa16.82■□□□□ 0.28
PDLIM2-201ENST00000265810 XDHP47989 1333 aa16.82■□□□□ 0.28
PDLIM2-201ENST00000265810 OLFM4Q6UX06 510 aa16.82■□□□□ 0.28
PDLIM2-201ENST00000265810 ALG1Q9BT22 464 aa16.82■□□□□ 0.28
PDLIM2-201ENST00000265810 BBOX1O75936 387 aa16.82■□□□□ 0.28
PDLIM2-201ENST00000265810 EPB41L2O43491 1005 aaKnown RBP16.81■□□□□ 0.28
PDLIM2-201ENST00000265810 FEZ1Q99689 392 aa16.81■□□□□ 0.28
PDLIM2-201ENST00000265810 RABL6Q3YEC7 729 aaPredicted RBP16.81■□□□□ 0.28
PDLIM2-201ENST00000265810 INTS4Q96HW7 963 aaKnown RBP16.81■□□□□ 0.28
PDLIM2-201ENST00000265810 NAP1L5Q96NT1 182 aaPredicted RBP16.81■□□□□ 0.28
PDLIM2-201ENST00000265810 NAT10Q9H0A0 1025 aaKnown RBP16.81■□□□□ 0.28
PDLIM2-201ENST00000265810 BSDC1Q9NW68 430 aaPredicted RBP16.81■□□□□ 0.28
PDLIM2-201ENST00000265810 PPIP5K2O43314 1243 aa16.81■□□□□ 0.28
PDLIM2-201ENST00000265810 CAMTA2O94983 1202 aa16.81■□□□□ 0.28
PDLIM2-201ENST00000265810 TBC1D22AQ8WUA7 517 aa16.81■□□□□ 0.28
PDLIM2-201ENST00000265810 CNKSR1Q969H4 720 aa16.81■□□□□ 0.28
PDLIM2-201ENST00000265810 NUP62CLQ9H1M0 184 aa16.81■□□□□ 0.28
PDLIM2-201ENST00000265810 LEMD3Q9Y2U8 911 aa16.81■□□□□ 0.28
PDLIM2-201ENST00000265810 CELF1Q92879 486 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-201ENST00000265810 PATL2C9JE40 543 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-201ENST00000265810 TTC6Q86TZ1 520 aa16.8■□□□□ 0.28
PDLIM2-201ENST00000265810 ZNF589Q86UQ0 364 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-201ENST00000265810 CCAR1Q8IX12 1150 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-201ENST00000265810 LSG1Q9H089 658 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-201ENST00000265810 E7EWF7 191 aa16.8■□□□□ 0.28
PDLIM2-201ENST00000265810 PPEF1O14829 653 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-201ENST00000265810 NFIXQ14938 502 aa16.8■□□□□ 0.28
PDLIM2-201ENST00000265810 CAMK4Q16566 473 aa16.8■□□□□ 0.28
PDLIM2-201ENST00000265810 MAPKAPK5Q8IW41 473 aa16.8■□□□□ 0.28
PDLIM2-201ENST00000265810 ZNF34Q8IZ26 560 aa16.8■□□□□ 0.28
PDLIM2-201ENST00000265810 SDR42E1Q8WUS8 393 aa16.8■□□□□ 0.28
PDLIM2-201ENST00000265810 PTPDC1A2A3K4 754 aa16.79■□□□□ 0.28
PDLIM2-201ENST00000265810 FGAP02671 866 aa16.79■□□□□ 0.28
PDLIM2-201ENST00000265810 CCDC192P0DO97 292 aa16.79■□□□□ 0.28
PDLIM2-201ENST00000265810 EN1Q05925 392 aaPredicted RBP16.79■□□□□ 0.28
PDLIM2-201ENST00000265810 GRAPQ13588 217 aa16.79■□□□□ 0.28
PDLIM2-201ENST00000265810 CCDC178Q5BJE1 867 aa16.79■□□□□ 0.28
PDLIM2-201ENST00000265810 RC3H1Q5TC82 1133 aaKnown RBP16.79■□□□□ 0.28
PDLIM2-201ENST00000265810 GRAPLQ8TC17 118 aaPredicted RBP16.79■□□□□ 0.28
PDLIM2-201ENST00000265810 ZMYM1Q5SVZ6 1142 aa16.79■□□□□ 0.28
PDLIM2-201ENST00000265810 CCDC194A0A1B0GVG4 234 aa16.79■□□□□ 0.28
PDLIM2-201ENST00000265810 UBE3CQ15386 1083 aa16.79■□□□□ 0.28
PDLIM2-201ENST00000265810 RASEFQ8IZ41 740 aa16.79■□□□□ 0.28
PDLIM2-201ENST00000265810 TGFBRAP1Q8WUH2 860 aa16.79■□□□□ 0.28
PDLIM2-201ENST00000265810 CEP131Q9UPN4 1083 aa16.79■□□□□ 0.28
PDLIM2-201ENST00000265810 SYCE3A1L190 88 aa16.79■□□□□ 0.28
PDLIM2-201ENST00000265810 SUPT20HQ8NEM7 779 aa16.79■□□□□ 0.28
PDLIM2-201ENST00000265810 MAP4K1Q92918 833 aa16.79■□□□□ 0.28
PDLIM2-201ENST00000265810 TTF2Q9UNY4 1162 aaKnown RBP16.79■□□□□ 0.28
PDLIM2-201ENST00000265810 GJA3Q9Y6H8 435 aa16.79■□□□□ 0.28
PDLIM2-201ENST00000265810 TTLL12Q14166 644 aaPredicted RBP16.78■□□□□ 0.28
PDLIM2-201ENST00000265810 ANKRD20A12PQ8NF67 263 aa16.78■□□□□ 0.28
PDLIM2-201ENST00000265810 NCOA5Q9HCD5 579 aaKnown RBP16.78■□□□□ 0.28
PDLIM2-201ENST00000265810 IFNL3Q8IZI9 196 aa16.78■□□□□ 0.28
PDLIM2-201ENST00000265810 TM6SF1Q9BZW5 370 aa16.78■□□□□ 0.28
PDLIM2-201ENST00000265810 USP17L12C9JPN9 530 aa16.78■□□□□ 0.28
PDLIM2-201ENST00000265810 USP17L21D6R901 530 aa16.78■□□□□ 0.28
PDLIM2-201ENST00000265810 ANGEL1Q9UNK9 670 aaKnown RBP16.78■□□□□ 0.28
PDLIM2-201ENST00000265810 BCS1LQ9Y276 419 aa16.78■□□□□ 0.28
PDLIM2-201ENST00000265810 CAMTA1Q9Y6Y1 1673 aa16.78■□□□□ 0.28
PDLIM2-201ENST00000265810 MON2Q7Z3U7 1717 aa16.78■□□□□ 0.28
PDLIM2-201ENST00000265810 XRN1Q8IZH2 1706 aaKnown RBP16.78■□□□□ 0.28
PDLIM2-201ENST00000265810 ZNF76P36508 570 aa16.77■□□□□ 0.28
PDLIM2-201ENST00000265810 RASGRF1Q13972 1273 aa16.77■□□□□ 0.28
PDLIM2-201ENST00000265810 ZSCAN16Q9H4T2 348 aaPredicted RBP16.77■□□□□ 0.28
PDLIM2-201ENST00000265810 INTS5Q6P9B9 1019 aaKnown RBP16.77■□□□□ 0.28
PDLIM2-201ENST00000265810 TMEM87BQ96K49 555 aa16.77■□□□□ 0.28
PDLIM2-201ENST00000265810 MINPP1Q9UNW1 487 aa16.77■□□□□ 0.28
PDLIM2-201ENST00000265810 SYT1P21579 422 aa16.77■□□□□ 0.27
PDLIM2-201ENST00000265810 MAST3O60307 1309 aa16.77■□□□□ 0.27
PDLIM2-201ENST00000265810 F13A1P00488 732 aa16.77■□□□□ 0.27
PDLIM2-201ENST00000265810 TPM3P06753 285 aa16.77■□□□□ 0.27
PDLIM2-201ENST00000265810 TPM2P07951 284 aa16.77■□□□□ 0.27
PDLIM2-201ENST00000265810 GPR101Q96P66 508 aaPredicted RBP16.76■□□□□ 0.27
PDLIM2-201ENST00000265810 MCAMP43121 646 aa16.76■□□□□ 0.27
PDLIM2-201ENST00000265810 OSBP2Q969R2 916 aa16.76■□□□□ 0.27
PDLIM2-201ENST00000265810 CNPY2Q9Y2B0 182 aa16.76■□□□□ 0.27
PDLIM2-201ENST00000265810 ATF5Q9Y2D1 282 aaPredicted RBP16.76■□□□□ 0.27
PDLIM2-201ENST00000265810 CARMIL3Q8ND23 1372 aa16.76■□□□□ 0.27
PDLIM2-201ENST00000265810 GNAQP50148 359 aa16.75■□□□□ 0.27
PDLIM2-201ENST00000265810 DNM1Q05193 864 aaKnown RBP16.75■□□□□ 0.27
PDLIM2-201ENST00000265810 ADCK5Q3MIX3 580 aa16.75■□□□□ 0.27
PDLIM2-201ENST00000265810 ATG9AQ7Z3C6 839 aa16.75■□□□□ 0.27
PDLIM2-201ENST00000265810 KIAA0825Q8IV33 1275 aa16.75■□□□□ 0.27
PDLIM2-201ENST00000265810 PIK3C2AO00443 1686 aa16.75■□□□□ 0.27
PDLIM2-201ENST00000265810 TCP10Q12799 353 aa16.75■□□□□ 0.27
PDLIM2-201ENST00000265810 RAB3GAP1Q15042 981 aa16.75■□□□□ 0.27
PDLIM2-201ENST00000265810 AKNAD1Q5T1N1 836 aa16.75■□□□□ 0.27
PDLIM2-201ENST00000265810 CALM1P0DP23 149 aa16.75■□□□□ 0.27
PDLIM2-201ENST00000265810 CALM2P0DP24 149 aa16.75■□□□□ 0.27
PDLIM2-201ENST00000265810 CALM3P0DP25 149 aa16.75■□□□□ 0.27
PDLIM2-201ENST00000265810 SCNN1DP51172 638 aa16.75■□□□□ 0.27
PDLIM2-201ENST00000265810 SLFNL1Q499Z3 407 aa16.75■□□□□ 0.27
PDLIM2-201ENST00000265810 PUS7LQ9H0K6 701 aaKnown RBP16.75■□□□□ 0.27
PDLIM2-201ENST00000265810 ADD2P35612 726 aa16.75■□□□□ 0.27
PDLIM2-201ENST00000265810 PCMTD1Q96MG8 357 aaPredicted RBP16.75■□□□□ 0.27
PDLIM2-201ENST00000265810 MYL10Q9BUA6 226 aa16.75■□□□□ 0.27
PDLIM2-201ENST00000265810 PLA2G12BQ9BX93 195 aa16.75■□□□□ 0.27
PDLIM2-201ENST00000265810 PIH1D3Q9NQM4 214 aaKnown RBP16.75■□□□□ 0.27
PDLIM2-201ENST00000265810 RTL9Q8NET4 1388 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms