RNA–Protein interactions for RNA: ENST00000265421.8

POLB-201, Transcript of DNA polymerase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLB, Length 1,329 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-201ENST00000265421 GPR108Q9NPR9 543 aa13.68□□□□□ -0.22
POLB-201ENST00000265421 SCAF8Q9UPN6 1271 aaKnown RBP13.68□□□□□ -0.22
POLB-201ENST00000265421 MAST3O60307 1309 aa13.68□□□□□ -0.22
POLB-201ENST00000265421 PDS5AQ29RF7 1337 aaKnown RBP13.68□□□□□ -0.22
POLB-201ENST00000265421 A0A1B0GUL7 405 aa13.67□□□□□ -0.22
POLB-201ENST00000265421 AOC2O75106 756 aa13.67□□□□□ -0.22
POLB-201ENST00000265421 CTCFP49711 727 aaPredicted RBP13.67□□□□□ -0.22
POLB-201ENST00000265421 ZNF157P51786 506 aaPredicted RBP13.67□□□□□ -0.22
POLB-201ENST00000265421 TNFAIP1Q13829 316 aa13.67□□□□□ -0.22
POLB-201ENST00000265421 MAP3K11Q16584 847 aa13.67□□□□□ -0.22
POLB-201ENST00000265421 SUPT20HL1Q3ZLR7 823 aa13.67□□□□□ -0.22
POLB-201ENST00000265421 REM2Q8IYK8 340 aaPredicted RBP13.67□□□□□ -0.22
POLB-201ENST00000265421 PANK1Q8TE04 598 aa13.67□□□□□ -0.22
POLB-201ENST00000265421 TEKT1Q969V4 418 aa13.67□□□□□ -0.22
POLB-201ENST00000265421 XAGE2Q96GT9 111 aa13.67□□□□□ -0.22
POLB-201ENST00000265421 PRDM10Q9NQV6 1147 aa13.67□□□□□ -0.22
POLB-201ENST00000265421 RNF216Q9NWF9 866 aaPredicted RBP13.67□□□□□ -0.22
POLB-201ENST00000265421 ZNF70Q9UC06 446 aaPredicted RBP13.67□□□□□ -0.22
POLB-201ENST00000265421 CLRN2A0PK11 232 aa13.66□□□□□ -0.22
POLB-201ENST00000265421 FOXN1O15353 648 aa13.66□□□□□ -0.22
POLB-201ENST00000265421 CA12O43570 354 aa13.66□□□□□ -0.22
POLB-201ENST00000265421 PHKA1P46020 1223 aa13.66□□□□□ -0.22
POLB-201ENST00000265421 RASA3Q14644 834 aa13.66□□□□□ -0.22
POLB-201ENST00000265421 MVPQ14764 893 aaKnown RBP13.66□□□□□ -0.22
POLB-201ENST00000265421 LDLRAD1Q5T700 205 aa13.66□□□□□ -0.22
POLB-201ENST00000265421 FKBP1CQ5VVH2 108 aa13.66□□□□□ -0.22
POLB-201ENST00000265421 APOBEC3HQ6NTF7 200 aaKnown RBP13.66□□□□□ -0.22
POLB-201ENST00000265421 ARMC9Q7Z3E5 817 aa13.66□□□□□ -0.22
POLB-201ENST00000265421 BEGAINQ9BUH8 593 aa13.66□□□□□ -0.22
POLB-201ENST00000265421 CHMP4BQ9H444 224 aaKnown RBP13.66□□□□□ -0.22
POLB-201ENST00000265421 COL1A1P02452 1464 aaPredicted RBP13.66□□□□□ -0.22
POLB-201ENST00000265421 AOX1Q06278 1338 aa13.66□□□□□ -0.22
POLB-201ENST00000265421 UBE2Q2LH0YL09 131 aa13.65□□□□□ -0.22
POLB-201ENST00000265421 SLC10A3P09131 477 aa13.65□□□□□ -0.22
POLB-201ENST00000265421 ADORA1P30542 326 aa13.65□□□□□ -0.22
POLB-201ENST00000265421 GRM1Q13255 1194 aa13.65□□□□□ -0.22
POLB-201ENST00000265421 PDE3AQ14432 1141 aa13.65□□□□□ -0.22
POLB-201ENST00000265421 COL13A1Q5TAT6 717 aaPredicted RBP13.65□□□□□ -0.22
POLB-201ENST00000265421 ZGPATQ8N5A5 531 aaKnown RBP13.65□□□□□ -0.22
POLB-201ENST00000265421 TDRD3Q9H7E2 651 aaKnown RBP13.65□□□□□ -0.22
POLB-201ENST00000265421 DDX19BQ9UMR2 479 aa13.65□□□□□ -0.22
POLB-201ENST00000265421 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.65□□□□□ -0.22
POLB-201ENST00000265421 PCNTO95613 3336 aa13.65□□□□□ -0.22
POLB-201ENST00000265421 PPP1R12BO60237 982 aaPredicted RBP13.64□□□□□ -0.23
POLB-201ENST00000265421 SURF6O75683 361 aaKnown RBP13.64□□□□□ -0.23
POLB-201ENST00000265421 CEP85Q6P2H3 762 aa13.64□□□□□ -0.23
POLB-201ENST00000265421 RPAP2Q8IXW5 612 aaPredicted RBP13.64□□□□□ -0.23
POLB-201ENST00000265421 NEUROD6Q96NK8 337 aa13.64□□□□□ -0.23
POLB-201ENST00000265421 C1orf115Q9H7X2 142 aa13.64□□□□□ -0.23
POLB-201ENST00000265421 VEZTQ9HBM0 779 aa13.64□□□□□ -0.23
POLB-201ENST00000265421 ZBTB40Q9NUA8 1239 aa13.64□□□□□ -0.23
POLB-201ENST00000265421 LDHBP07195 334 aaKnown RBP13.64□□□□□ -0.23
POLB-201ENST00000265421 TNNI2P48788 182 aa13.64□□□□□ -0.23
POLB-201ENST00000265421 KIF23Q02241 960 aaPredicted RBP13.64□□□□□ -0.23
POLB-201ENST00000265421 RASGRF1Q13972 1273 aa13.64□□□□□ -0.23
POLB-201ENST00000265421 MOB2Q70IA6 237 aa13.64□□□□□ -0.23
POLB-201ENST00000265421 FAM83AQ86UY5 434 aa13.64□□□□□ -0.23
POLB-201ENST00000265421 RASAL3Q86YV0 1011 aa13.64□□□□□ -0.23
POLB-201ENST00000265421 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.64□□□□□ -0.23
POLB-201ENST00000265421 FAM163AQ96GL9 167 aaPredicted RBP13.64□□□□□ -0.23
POLB-201ENST00000265421 TEPSINQ96N21 525 aa13.64□□□□□ -0.23
POLB-201ENST00000265421 ZIC5Q96T25 663 aa13.64□□□□□ -0.23
POLB-201ENST00000265421 RNF39Q9H2S5 420 aa13.64□□□□□ -0.23
POLB-201ENST00000265421 IGSF3O75054 1194 aa13.63□□□□□ -0.23
POLB-201ENST00000265421 UQCRFS1P1P0C7P4 283 aa13.63□□□□□ -0.23
POLB-201ENST00000265421 HSPA8P11142 646 aaKnown RBP13.63□□□□□ -0.23
POLB-201ENST00000265421 PRDX5P30044 214 aa13.63□□□□□ -0.23
POLB-201ENST00000265421 TTLL12Q14166 644 aaPredicted RBP13.63□□□□□ -0.23
POLB-201ENST00000265421 NBPF12Q5TAG4 269 aaPredicted RBP13.63□□□□□ -0.23
POLB-201ENST00000265421 SPTY2D1Q68D10 685 aaPredicted RBP13.63□□□□□ -0.23
POLB-201ENST00000265421 ZNF512BQ96KM6 892 aaPredicted RBP13.63□□□□□ -0.23
POLB-201ENST00000265421 CSRNP1Q96S65 589 aa13.63□□□□□ -0.23
POLB-201ENST00000265421 USP2O75604 605 aaPredicted RBP13.62□□□□□ -0.23
POLB-201ENST00000265421 ARID4AP29374 1257 aaPredicted RBP13.62□□□□□ -0.23
POLB-201ENST00000265421 TNNI3KQ59H18 835 aa13.62□□□□□ -0.23
POLB-201ENST00000265421 GORABQ5T7V8 394 aa13.62□□□□□ -0.23
POLB-201ENST00000265421 IFFO2Q5TF58 517 aa13.62□□□□□ -0.23
POLB-201ENST00000265421 SAGE1Q9NXZ1 904 aa13.62□□□□□ -0.23
POLB-201ENST00000265421 HMG20BQ9P0W2 317 aa13.62□□□□□ -0.23
POLB-201ENST00000265421 ANGEL1Q9UNK9 670 aaKnown RBP13.62□□□□□ -0.23
POLB-201ENST00000265421 COG6Q9Y2V7 657 aa13.62□□□□□ -0.23
POLB-201ENST00000265421 FPGT-TNNI3KV9GXZ4 949 aa13.62□□□□□ -0.23
POLB-201ENST00000265421 TCP10L2B9ZVM9 353 aa13.61□□□□□ -0.23
POLB-201ENST00000265421 TM4SF4P48230 202 aa13.61□□□□□ -0.23
POLB-201ENST00000265421 LBX1P52954 281 aa13.61□□□□□ -0.23
POLB-201ENST00000265421 OS9Q13438 667 aaPredicted RBP13.61□□□□□ -0.23
POLB-201ENST00000265421 HSP90AB4PQ58FF6 505 aa13.61□□□□□ -0.23
POLB-201ENST00000265421 ERC1Q8IUD2 1116 aa13.61□□□□□ -0.23
POLB-201ENST00000265421 SLF2Q8IX21 1173 aa13.61□□□□□ -0.23
POLB-201ENST00000265421 SPATA5Q8NB90 893 aa13.61□□□□□ -0.23
POLB-201ENST00000265421 TMOD2Q9NZR1 351 aa13.61□□□□□ -0.23
POLB-201ENST00000265421 DAGLAQ9Y4D2 1042 aa13.61□□□□□ -0.23
POLB-201ENST00000265421 IREB2P48200 963 aaKnown RBP13.6□□□□□ -0.23
POLB-201ENST00000265421 PRKG1Q13976 671 aa13.6□□□□□ -0.23
POLB-201ENST00000265421 DIXDC1Q155Q3 683 aa13.6□□□□□ -0.23
POLB-201ENST00000265421 CCDC158Q5M9N0 1113 aa13.6□□□□□ -0.23
POLB-201ENST00000265421 CDC42EP5Q6NZY7 148 aa13.6□□□□□ -0.23
POLB-201ENST00000265421 HOOK2Q96ED9 719 aa13.6□□□□□ -0.23
POLB-201ENST00000265421 SLC10A4Q96EP9 437 aa13.6□□□□□ -0.23
POLB-201ENST00000265421 TMEM39BQ9GZU3 492 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms