RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 MYOZ2Q9NPC6 264 aa22.38■■□□□ 1.17
SDF4-201ENST00000263741 SALL1Q9NSC2 1324 aa22.38■■□□□ 1.17
SDF4-201ENST00000263741 KIF4BQ2VIQ3 1234 aa22.38■■□□□ 1.17
SDF4-201ENST00000263741 OGFOD1Q8N543 542 aa22.38■■□□□ 1.17
SDF4-201ENST00000263741 PIH1D3Q9NQM4 214 aaKnown RBP22.38■■□□□ 1.17
SDF4-201ENST00000263741 ECHDC1Q9NTX5 307 aa22.38■■□□□ 1.17
SDF4-201ENST00000263741 AOX1Q06278 1338 aa22.37■■□□□ 1.17
SDF4-201ENST00000263741 MX1P20591 662 aa22.37■■□□□ 1.17
SDF4-201ENST00000263741 DIXDC1Q155Q3 683 aa22.37■■□□□ 1.17
SDF4-201ENST00000263741 AK9Q5TCS8 1911 aa22.37■■□□□ 1.17
SDF4-201ENST00000263741 LDHBP07195 334 aaKnown RBP22.37■■□□□ 1.17
SDF4-201ENST00000263741 SKAP1Q86WV1 359 aa22.37■■□□□ 1.17
SDF4-201ENST00000263741 ATP5JP18859 108 aa22.36■■□□□ 1.17
SDF4-201ENST00000263741 HDAC9Q9UKV0 1011 aa22.36■■□□□ 1.17
SDF4-201ENST00000263741 ZBTB22O15209 634 aa22.35■■□□□ 1.17
SDF4-201ENST00000263741 GPATCH3Q96I76 525 aa22.35■■□□□ 1.17
SDF4-201ENST00000263741 GOLIM4O00461 696 aa22.35■■□□□ 1.17
SDF4-201ENST00000263741 MAP4K4O95819 1239 aaPredicted RBP22.35■■□□□ 1.17
SDF4-201ENST00000263741 PDE4AP27815 886 aa22.35■■□□□ 1.17
SDF4-201ENST00000263741 RBM5P52756 815 aaKnown RBP eCLIP22.35■■□□□ 1.178e-6■■■■□ 20.7
SDF4-201ENST00000263741 NBPF9Q3BBW0 867 aa22.35■■□□□ 1.17
SDF4-201ENST00000263741 CFAP100Q494V2 611 aa22.35■■□□□ 1.17
SDF4-201ENST00000263741 ZNF384Q8TF68 577 aa22.35■■□□□ 1.17
SDF4-201ENST00000263741 CLEC11AQ9Y240 323 aa22.35■■□□□ 1.17
SDF4-201ENST00000263741 PI4K2BQ8TCG2 481 aa22.34■■□□□ 1.17
SDF4-201ENST00000263741 RAI14Q9P0K7 980 aa22.34■■□□□ 1.17
SDF4-201ENST00000263741 LRP2BPQ9P2M1 347 aa22.34■■□□□ 1.17
SDF4-201ENST00000263741 SCAF8Q9UPN6 1271 aaKnown RBP22.34■■□□□ 1.17
SDF4-201ENST00000263741 CRKP46108 304 aa22.34■■□□□ 1.17
SDF4-201ENST00000263741 ERICH6Q7L0X2 663 aa22.34■■□□□ 1.17
SDF4-201ENST00000263741 DZIP1Q86YF9 867 aaKnown RBP22.34■■□□□ 1.17
SDF4-201ENST00000263741 ZGPATQ8N5A5 531 aaKnown RBP22.34■■□□□ 1.17
SDF4-201ENST00000263741 USP50Q70EL3 339 aaPredicted RBP22.33■■□□□ 1.17
SDF4-201ENST00000263741 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.33■■□□□ 1.17
SDF4-201ENST00000263741 RBM19Q9Y4C8 960 aaKnown RBP22.33■■□□□ 1.17
SDF4-201ENST00000263741 IDH1O75874 414 aaKnown RBP22.32■■□□□ 1.16
SDF4-201ENST00000263741 PDE1AP54750 535 aa22.32■■□□□ 1.16
SDF4-201ENST00000263741 MECOMQ03112 1051 aa22.32■■□□□ 1.16
SDF4-201ENST00000263741 CENPQQ7L2Z9 268 aaPredicted RBP22.32■■□□□ 1.16
SDF4-201ENST00000263741 PNMA8AQ86V59 439 aaPredicted RBP22.32■■□□□ 1.16
SDF4-201ENST00000263741 HAUS7Q99871 368 aa22.32■■□□□ 1.16
SDF4-201ENST00000263741 ANP32EQ9BTT0 268 aa22.32■■□□□ 1.16
SDF4-201ENST00000263741 CDK5RAP2Q96SN8 1893 aa22.32■■□□□ 1.16
SDF4-201ENST00000263741 TTC41PQ6P2S7 1318 aa22.32■■□□□ 1.16
SDF4-201ENST00000263741 WNT10BO00744 389 aa22.32■■□□□ 1.16
SDF4-201ENST00000263741 DLGAP5Q15398 846 aa22.32■■□□□ 1.16
SDF4-201ENST00000263741 PAG1Q9NWQ8 432 aa22.32■■□□□ 1.16
SDF4-201ENST00000263741 PPP4R2Q9NY27 417 aa22.32■■□□□ 1.16
SDF4-201ENST00000263741 SUGT1Q9Y2Z0 365 aa22.32■■□□□ 1.16
SDF4-201ENST00000263741 MAP1SQ66K74 1059 aaPredicted RBP22.31■■□□□ 1.16
SDF4-201ENST00000263741 TEKT1Q969V4 418 aa22.31■■□□□ 1.16
SDF4-201ENST00000263741 PRMT6Q96LA8 375 aaPredicted RBP22.31■■□□□ 1.16
SDF4-201ENST00000263741 GGA3Q9NZ52 723 aa22.31■■□□□ 1.16
SDF4-201ENST00000263741 MAST3O60307 1309 aa22.31■■□□□ 1.16
SDF4-201ENST00000263741 PLEKHM2Q8IWE5 1019 aa22.3■■□□□ 1.16
SDF4-201ENST00000263741 SERPINA10Q9UK55 444 aa22.3■■□□□ 1.16
SDF4-201ENST00000263741 CLRN2A0PK11 232 aa22.3■■□□□ 1.16
SDF4-201ENST00000263741 SPDYE2BA6NHP3 402 aa22.3■■□□□ 1.16
SDF4-201ENST00000263741 CHGBP05060 677 aa22.3■■□□□ 1.16
SDF4-201ENST00000263741 SPDYE6P0CI01 402 aa22.3■■□□□ 1.16
SDF4-201ENST00000263741 SPTY2D1Q68D10 685 aaPredicted RBP22.3■■□□□ 1.16
SDF4-201ENST00000263741 LDHDQ86WU2 507 aa22.3■■□□□ 1.16
SDF4-201ENST00000263741 NSUN4Q96CB9 384 aaKnown RBP22.3■■□□□ 1.16
SDF4-201ENST00000263741 ZBED3Q96IU2 234 aaPredicted RBP22.3■■□□□ 1.16
SDF4-201ENST00000263741 DAGLAQ9Y4D2 1042 aa22.3■■□□□ 1.16
SDF4-201ENST00000263741 ANGEL2Q5VTE6 544 aaKnown RBP22.29■■□□□ 1.16
SDF4-201ENST00000263741 SLFNL1Q499Z3 407 aa22.29■■□□□ 1.16
SDF4-201ENST00000263741 DLK2Q6UY11 383 aa22.29■■□□□ 1.16
SDF4-201ENST00000263741 STAP2Q9UGK3 403 aa22.29■■□□□ 1.16
SDF4-201ENST00000263741 ERC2O15083 957 aa22.28■■□□□ 1.16
SDF4-201ENST00000263741 GLRX3O76003 335 aaKnown RBP22.28■■□□□ 1.16
SDF4-201ENST00000263741 ADGRA1Q86SQ6 560 aa22.28■■□□□ 1.16
SDF4-201ENST00000263741 TDRD3Q9H7E2 651 aaKnown RBP22.28■■□□□ 1.16
SDF4-201ENST00000263741 TOMM70O94826 608 aa22.27■■□□□ 1.16
SDF4-201ENST00000263741 CACNB3P54284 484 aa22.27■■□□□ 1.16
SDF4-201ENST00000263741 MAGEB6Q8N7X4 407 aa22.27■■□□□ 1.16
SDF4-201ENST00000263741 MTMR14Q8NCE2 650 aa22.27■■□□□ 1.16
SDF4-201ENST00000263741 ZDHHC15Q96MV8 337 aa22.27■■□□□ 1.16
SDF4-201ENST00000263741 MROH7-TTC4A0A0A0MT08 1334 aa22.27■■□□□ 1.16
SDF4-201ENST00000263741 HDLBPQ00341 1268 aaKnown RBP22.26■■□□□ 1.15
SDF4-201ENST00000263741 NAA16Q6N069 864 aaPredicted RBP22.26■■□□□ 1.15
SDF4-201ENST00000263741 APOBEC3HQ6NTF7 200 aaKnown RBP22.26■■□□□ 1.15
SDF4-201ENST00000263741 CHADLQ6NUI6 762 aa22.26■■□□□ 1.15
SDF4-201ENST00000263741 ADM5C9JUS6 153 aa22.26■■□□□ 1.15
SDF4-201ENST00000263741 FMR1Q06787 632 aaKnown RBP eCLIP22.26■■□□□ 1.15
SDF4-201ENST00000263741 TTF1Q15361 905 aaPredicted RBP22.26■■□□□ 1.15
SDF4-201ENST00000263741 HHIPL2Q6UWX4 724 aa22.26■■□□□ 1.15
SDF4-201ENST00000263741 GLIS2Q9BZE0 524 aaPredicted RBP22.26■■□□□ 1.15
SDF4-201ENST00000263741 VEZTQ9HBM0 779 aa22.26■■□□□ 1.15
SDF4-201ENST00000263741 GAKO14976 1311 aa22.26■■□□□ 1.15
SDF4-201ENST00000263741 FOCADQ5VW36 1801 aa22.25■■□□□ 1.15
SDF4-201ENST00000263741 TRPM7Q96QT4 1865 aa22.25■■□□□ 1.15
SDF4-201ENST00000263741 MAP3K12Q12852 859 aa22.24■■□□□ 1.15
SDF4-201ENST00000263741 RBM46Q8TBY0 533 aaKnown RBP22.24■■□□□ 1.15
SDF4-201ENST00000263741 TRAF5O00463 557 aa22.24■■□□□ 1.15
SDF4-201ENST00000263741 PDE6AP16499 860 aa22.24■■□□□ 1.15
SDF4-201ENST00000263741 CYP7A1P22680 504 aa22.24■■□□□ 1.15
SDF4-201ENST00000263741 BTDP43251 543 aa22.24■■□□□ 1.15
SDF4-201ENST00000263741 MMP14P50281 582 aa22.24■■□□□ 1.15
SDF4-201ENST00000263741 SLC9C2Q5TAH2 1124 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms