RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 SGSM2O43147 1006 aa11.75□□□□□ -0.53
SNRNP40-201ENST00000263694 PDE6AP16499 860 aa11.75□□□□□ -0.53
SNRNP40-201ENST00000263694 YBX3P16989 372 aaKnown RBP eCLIP11.75□□□□□ -0.531e-10■■□□□ 12.7
SNRNP40-201ENST00000263694 ADD2P35612 726 aa11.75□□□□□ -0.53
SNRNP40-201ENST00000263694 ARHGAP27Q6ZUM4 889 aa11.75□□□□□ -0.53
SNRNP40-201ENST00000263694 ZNF589Q86UQ0 364 aaPredicted RBP11.75□□□□□ -0.53
SNRNP40-201ENST00000263694 ZNF384Q8TF68 577 aa11.75□□□□□ -0.53
SNRNP40-201ENST00000263694 OSBP2Q969R2 916 aa11.75□□□□□ -0.53
SNRNP40-201ENST00000263694 TAOK3Q9H2K8 898 aa11.75□□□□□ -0.53
SNRNP40-201ENST00000263694 PDS5AQ29RF7 1337 aaKnown RBP11.75□□□□□ -0.53
SNRNP40-201ENST00000263694 TCRBV5S4A2TA0A5A2 114 aa11.75□□□□□ -0.53
SNRNP40-201ENST00000263694 IARSP41252 1262 aaKnown RBP11.75□□□□□ -0.53
SNRNP40-201ENST00000263694 MECOMQ03112 1051 aa11.75□□□□□ -0.53
SNRNP40-201ENST00000263694 MAP3K12Q12852 859 aa11.75□□□□□ -0.53
SNRNP40-201ENST00000263694 MFSD14BQ5SR56 506 aa11.75□□□□□ -0.53
SNRNP40-201ENST00000263694 ZMYM1Q5SVZ6 1142 aa11.75□□□□□ -0.53
SNRNP40-201ENST00000263694 TTLL5Q6EMB2 1281 aa11.75□□□□□ -0.53
SNRNP40-201ENST00000263694 ADGRA1Q86SQ6 560 aa11.75□□□□□ -0.53
SNRNP40-201ENST00000263694 CERS5Q8N5B7 392 aa11.75□□□□□ -0.53
SNRNP40-201ENST00000263694 WDR66Q8TBY9 1149 aa11.75□□□□□ -0.53
SNRNP40-201ENST00000263694 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.75□□□□□ -0.53
SNRNP40-201ENST00000263694 PUS7LQ9H0K6 701 aaKnown RBP11.75□□□□□ -0.53
SNRNP40-201ENST00000263694 FAM205AQ6ZU69 1335 aa11.74□□□□□ -0.53
SNRNP40-201ENST00000263694 F8W031 263 aaPredicted RBP11.74□□□□□ -0.53
SNRNP40-201ENST00000263694 HIP1O00291 1037 aa11.74□□□□□ -0.53
SNRNP40-201ENST00000263694 MKRN4PQ13434 485 aaPredicted RBP11.74□□□□□ -0.53
SNRNP40-201ENST00000263694 ERICH6Q7L0X2 663 aa11.74□□□□□ -0.53
SNRNP40-201ENST00000263694 PODNQ7Z5L7 613 aa11.74□□□□□ -0.53
SNRNP40-201ENST00000263694 ZNF646O15015 1829 aaPredicted RBP11.74□□□□□ -0.53
SNRNP40-201ENST00000263694 MAST3O60307 1309 aa11.73□□□□□ -0.53
SNRNP40-201ENST00000263694 RAD17O75943 681 aa11.73□□□□□ -0.53
SNRNP40-201ENST00000263694 LDHBP07195 334 aaKnown RBP11.73□□□□□ -0.53
SNRNP40-201ENST00000263694 CYP7A1P22680 504 aa11.73□□□□□ -0.53
SNRNP40-201ENST00000263694 PTH1RQ03431 593 aa11.73□□□□□ -0.53
SNRNP40-201ENST00000263694 MCMDC2Q4G0Z9 681 aa11.73□□□□□ -0.53
SNRNP40-201ENST00000263694 MIGA1Q8NAN2 632 aa11.73□□□□□ -0.53
SNRNP40-201ENST00000263694 RUFY2Q8WXA3 655 aa11.73□□□□□ -0.53
SNRNP40-201ENST00000263694 NSUN4Q96CB9 384 aaKnown RBP11.73□□□□□ -0.53
SNRNP40-201ENST00000263694 ANO2Q9NQ90 1003 aa11.73□□□□□ -0.53
SNRNP40-201ENST00000263694 RFX7Q2KHR2 1363 aa11.73□□□□□ -0.53
SNRNP40-201ENST00000263694 SALL1Q9NSC2 1324 aa11.72□□□□□ -0.53
SNRNP40-201ENST00000263694 ZFYP08048 801 aaPredicted RBP11.72□□□□□ -0.53
SNRNP40-201ENST00000263694 UBE3CQ15386 1083 aa11.72□□□□□ -0.53
SNRNP40-201ENST00000263694 DIXDC1Q155Q3 683 aa11.72□□□□□ -0.53
SNRNP40-201ENST00000263694 ZSCAN25Q6NSZ9 544 aa11.72□□□□□ -0.53
SNRNP40-201ENST00000263694 NIM1KQ8IY84 436 aa11.72□□□□□ -0.53
SNRNP40-201ENST00000263694 APPBP2Q92624 585 aa11.72□□□□□ -0.53
SNRNP40-201ENST00000263694 USP26Q9BXU7 913 aa11.72□□□□□ -0.53
SNRNP40-201ENST00000263694 HELLSQ9NRZ9 838 aa11.72□□□□□ -0.53
SNRNP40-201ENST00000263694 MYH2Q9UKX2 1941 aa11.72□□□□□ -0.53
SNRNP40-201ENST00000263694 UTRNP46939 3433 aa11.72□□□□□ -0.53
SNRNP40-201ENST00000263694 SBF1O95248 1867 aa11.71□□□□□ -0.53
SNRNP40-201ENST00000263694 USP17L3A6NCW0 530 aa11.71□□□□□ -0.53
SNRNP40-201ENST00000263694 USP17L4A6NCW7 530 aa11.71□□□□□ -0.53
SNRNP40-201ENST00000263694 DYNLL1P63167 89 aaKnown RBP11.71□□□□□ -0.53
SNRNP40-201ENST00000263694 LRRFIP1Q32MZ4 808 aaKnown RBP11.71□□□□□ -0.53
SNRNP40-201ENST00000263694 DACT2Q5SW24 774 aa11.71□□□□□ -0.53
SNRNP40-201ENST00000263694 VPS53Q5VIR6 699 aa11.71□□□□□ -0.53
SNRNP40-201ENST00000263694 SPTY2D1Q68D10 685 aaPredicted RBP11.71□□□□□ -0.53
SNRNP40-201ENST00000263694 NAA16Q6N069 864 aaPredicted RBP11.71□□□□□ -0.53
SNRNP40-201ENST00000263694 USP17L1Q7RTZ2 530 aa11.71□□□□□ -0.53
SNRNP40-201ENST00000263694 LSG1Q9H089 658 aaKnown RBP11.71□□□□□ -0.53
SNRNP40-201ENST00000263694 ARMT1Q9H993 441 aa11.71□□□□□ -0.53
SNRNP40-201ENST00000263694 LTBP3Q9NS15 1303 aa11.71□□□□□ -0.54
SNRNP40-201ENST00000263694 PSMD14O00487 310 aa11.71□□□□□ -0.54
SNRNP40-201ENST00000263694 SCNN1DP51172 638 aa11.71□□□□□ -0.54
SNRNP40-201ENST00000263694 STRIP1Q5VSL9 837 aa11.71□□□□□ -0.54
SNRNP40-201ENST00000263694 DZIP1Q86YF9 867 aaKnown RBP11.71□□□□□ -0.54
SNRNP40-201ENST00000263694 ZGPATQ8N5A5 531 aaKnown RBP11.71□□□□□ -0.54
SNRNP40-201ENST00000263694 TBC1D22AQ8WUA7 517 aa11.71□□□□□ -0.54
SNRNP40-201ENST00000263694 VPS33BQ9H267 617 aa11.71□□□□□ -0.54
SNRNP40-201ENST00000263694 ZNRF3Q9ULT6 936 aa11.71□□□□□ -0.54
SNRNP40-201ENST00000263694 ADAMTSL1Q8N6G6 1762 aa11.71□□□□□ -0.54
SNRNP40-201ENST00000263694 PSME4Q14997 1843 aa11.7□□□□□ -0.54
SNRNP40-201ENST00000263694 CCDC171Q6TFL3 1326 aa11.7□□□□□ -0.54
SNRNP40-201ENST00000263694 GPAA1O43292 621 aa11.7□□□□□ -0.54
SNRNP40-201ENST00000263694 PRKAB2O43741 272 aa11.7□□□□□ -0.54
SNRNP40-201ENST00000263694 REC8O95072 547 aa11.7□□□□□ -0.54
SNRNP40-201ENST00000263694 MBD4O95243 580 aa11.7□□□□□ -0.54
SNRNP40-201ENST00000263694 CXCL9Q07325 125 aa11.7□□□□□ -0.54
SNRNP40-201ENST00000263694 GPR162Q16538 588 aa11.7□□□□□ -0.54
SNRNP40-201ENST00000263694 KIAA1211Q6ZU35 1233 aa11.7□□□□□ -0.54
SNRNP40-201ENST00000263694 KIAA0825Q8IV33 1275 aa11.7□□□□□ -0.54
SNRNP40-201ENST00000263694 LCORLQ8N3X6 602 aa11.7□□□□□ -0.54
SNRNP40-201ENST00000263694 JDP2Q8WYK2 163 aa11.7□□□□□ -0.54
SNRNP40-201ENST00000263694 C22orf23Q9BZE7 217 aa11.7□□□□□ -0.54
SNRNP40-201ENST00000263694 PCDHAC2Q9Y5I4 1007 aa11.7□□□□□ -0.54
SNRNP40-201ENST00000263694 RAD50Q92878 1312 aa11.69□□□□□ -0.54
SNRNP40-201ENST00000263694 FOXP2O15409 715 aa11.69□□□□□ -0.54
SNRNP40-201ENST00000263694 TICAM2Q86XR7 235 aa11.69□□□□□ -0.54
SNRNP40-201ENST00000263694 AIDAQ96BJ3 306 aa11.69□□□□□ -0.54
SNRNP40-201ENST00000263694 STRBPQ96SI9 672 aaKnown RBP11.69□□□□□ -0.54
SNRNP40-201ENST00000263694 AATFQ9NY61 560 aaKnown RBP eCLIP11.69□□□□□ -0.54
SNRNP40-201ENST00000263694 TTF2Q9UNY4 1162 aaKnown RBP11.69□□□□□ -0.54
SNRNP40-201ENST00000263694 MAST2Q6P0Q8 1798 aa11.69□□□□□ -0.54
SNRNP40-201ENST00000263694 MAGEB6P1A0A0J9YX57 407 aa11.68□□□□□ -0.54
SNRNP40-201ENST00000263694 HSPD1P10809 573 aaKnown RBP11.68□□□□□ -0.54
SNRNP40-201ENST00000263694 RIOK1Q9BRS2 568 aaKnown RBP11.68□□□□□ -0.54
SNRNP40-201ENST00000263694 RBM19Q9Y4C8 960 aaKnown RBP11.68□□□□□ -0.54
SNRNP40-201ENST00000263694 VIL1P09327 827 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms