RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 HHIPL2Q6UWX4 724 aa15.25■□□□□ 0.03
CLNS1A-201ENST00000263309 HOOK2Q96ED9 719 aa15.25■□□□□ 0.03
CLNS1A-201ENST00000263309 JAG2Q9Y219 1238 aa15.25■□□□□ 0.03
CLNS1A-201ENST00000263309 WDR90Q96KV7 1748 aa15.25■□□□□ 0.03
CLNS1A-201ENST00000263309 DICER1Q9UPY3 1922 aaKnown RBP15.25■□□□□ 0.03
CLNS1A-201ENST00000263309 ZNF609O15014 1411 aa15.25■□□□□ 0.03
CLNS1A-201ENST00000263309 DUOX1Q9NRD9 1551 aa15.24■□□□□ 0.03
CLNS1A-201ENST00000263309 IRS2Q9Y4H2 1338 aa15.24■□□□□ 0.03
CLNS1A-201ENST00000263309 GLRX3O76003 335 aaKnown RBP15.24■□□□□ 0.03
CLNS1A-201ENST00000263309 MAP4K4O95819 1239 aaPredicted RBP15.24■□□□□ 0.03
CLNS1A-201ENST00000263309 PLCG2P16885 1265 aa15.24■□□□□ 0.03
CLNS1A-201ENST00000263309 ATP5JP18859 108 aa15.24■□□□□ 0.03
CLNS1A-201ENST00000263309 RASGRF1Q13972 1273 aa15.24■□□□□ 0.03
CLNS1A-201ENST00000263309 SCARF1Q14162 830 aa15.24■□□□□ 0.03
CLNS1A-201ENST00000263309 COL13A1Q5TAT6 717 aaPredicted RBP15.24■□□□□ 0.03
CLNS1A-201ENST00000263309 CHD1LQ86WJ1 897 aa15.24■□□□□ 0.03
CLNS1A-201ENST00000263309 APOBEC3FQ8IUX4 373 aaKnown RBP15.24■□□□□ 0.03
CLNS1A-201ENST00000263309 DNAJC2Q99543 621 aaKnown RBP15.24■□□□□ 0.03
CLNS1A-201ENST00000263309 HMG20BQ9P0W2 317 aa15.24■□□□□ 0.03
CLNS1A-201ENST00000263309 DBNLQ9UJU6 430 aaKnown RBP15.24■□□□□ 0.03
CLNS1A-201ENST00000263309 TIAM2Q8IVF5 1701 aa15.23■□□□□ 0.03
CLNS1A-201ENST00000263309 CCDC88AQ3V6T2 1871 aa15.23■□□□□ 0.03
CLNS1A-201ENST00000263309 SMARCA5O60264 1052 aaPredicted RBP15.23■□□□□ 0.03
CLNS1A-201ENST00000263309 CFAP100Q494V2 611 aa15.23■□□□□ 0.03
CLNS1A-201ENST00000263309 CENPQQ7L2Z9 268 aaPredicted RBP15.23■□□□□ 0.03
CLNS1A-201ENST00000263309 SAMD7Q7Z3H4 446 aa15.23■□□□□ 0.03
CLNS1A-201ENST00000263309 MTMR14Q8NCE2 650 aa15.23■□□□□ 0.03
CLNS1A-201ENST00000263309 GMLQ99445 158 aa15.23■□□□□ 0.03
CLNS1A-201ENST00000263309 IDH1O75874 414 aaKnown RBP15.22■□□□□ 0.03
CLNS1A-201ENST00000263309 MX1P20591 662 aa15.22■□□□□ 0.03
CLNS1A-201ENST00000263309 CRKP46108 304 aa15.22■□□□□ 0.03
CLNS1A-201ENST00000263309 NAA16Q6N069 864 aaPredicted RBP15.22■□□□□ 0.03
CLNS1A-201ENST00000263309 SMC5Q8IY18 1101 aa15.22■□□□□ 0.03
CLNS1A-201ENST00000263309 CNTROBQ8N137 903 aa15.22■□□□□ 0.03
CLNS1A-201ENST00000263309 DDRGK1Q96HY6 314 aa15.22■□□□□ 0.03
CLNS1A-201ENST00000263309 SNRKQ9NRH2 765 aa15.22■□□□□ 0.03
CLNS1A-201ENST00000263309 LTBP1Q14766 1721 aa15.21■□□□□ 0.03
CLNS1A-201ENST00000263309 MCAMP43121 646 aa15.21■□□□□ 0.03
CLNS1A-201ENST00000263309 NUCB1Q02818 461 aa15.21■□□□□ 0.03
CLNS1A-201ENST00000263309 SUPT20HL1Q3ZLR7 823 aa15.21■□□□□ 0.03
CLNS1A-201ENST00000263309 MXD3Q9BW11 206 aa15.21■□□□□ 0.03
CLNS1A-201ENST00000263309 BOLA2Q9H3K6 86 aa15.21■□□□□ 0.03
CLNS1A-201ENST00000263309 VEZTQ9HBM0 779 aa15.21■□□□□ 0.03
CLNS1A-201ENST00000263309 PAG1Q9NWQ8 432 aa15.21■□□□□ 0.03
CLNS1A-201ENST00000263309 COL4A1P02462 1669 aa15.21■□□□□ 0.03
CLNS1A-201ENST00000263309 PITPNM2Q9BZ72 1349 aa15.2■□□□□ 0.02
CLNS1A-201ENST00000263309 POTECB2RU33 542 aa15.2■□□□□ 0.02
CLNS1A-201ENST00000263309 IGHDP01880 384 aa15.2■□□□□ 0.02
CLNS1A-201ENST00000263309 ZAP70P43403 619 aa15.2■□□□□ 0.02
CLNS1A-201ENST00000263309 KRT26Q7Z3Y9 468 aa15.2■□□□□ 0.02
CLNS1A-201ENST00000263309 PPP4R2Q9NY27 417 aa15.2■□□□□ 0.02
CLNS1A-201ENST00000263309 PPP2R3BQ9Y5P8 575 aa15.2■□□□□ 0.02
CLNS1A-201ENST00000263309 SCN4AP35499 1836 aa15.2■□□□□ 0.02
CLNS1A-201ENST00000263309 GOLIM4O00461 696 aa15.19■□□□□ 0.02
CLNS1A-201ENST00000263309 WNT10BO00744 389 aa15.19■□□□□ 0.02
CLNS1A-201ENST00000263309 ZFYP08048 801 aaPredicted RBP15.19■□□□□ 0.02
CLNS1A-201ENST00000263309 ANGEL2Q5VTE6 544 aaKnown RBP15.19■□□□□ 0.02
CLNS1A-201ENST00000263309 TICAM2Q86XR7 235 aa15.19■□□□□ 0.02
CLNS1A-201ENST00000263309 AMOTL1Q8IY63 956 aa15.19■□□□□ 0.02
CLNS1A-201ENST00000263309 ZDHHC15Q96MV8 337 aa15.19■□□□□ 0.02
CLNS1A-201ENST00000263309 HAUS7Q99871 368 aa15.19■□□□□ 0.02
CLNS1A-201ENST00000263309 LNPKQ9C0E8 428 aa15.19■□□□□ 0.02
CLNS1A-201ENST00000263309 PGAP2Q9UHJ9 254 aa15.19■□□□□ 0.02
CLNS1A-201ENST00000263309 SPDYE2BA6NHP3 402 aa15.18■□□□□ 0.02
CLNS1A-201ENST00000263309 TRIM6-TRIM34B2RNG4 842 aa15.18■□□□□ 0.02
CLNS1A-201ENST00000263309 SPDYE6P0CI01 402 aa15.18■□□□□ 0.02
CLNS1A-201ENST00000263309 MECOMQ03112 1051 aa15.18■□□□□ 0.02
CLNS1A-201ENST00000263309 MAP1SQ66K74 1059 aaPredicted RBP15.18■□□□□ 0.02
CLNS1A-201ENST00000263309 CERS5Q8N5B7 392 aa15.18■□□□□ 0.02
CLNS1A-201ENST00000263309 C2orf69Q8N8R5 385 aa15.18■□□□□ 0.02
CLNS1A-201ENST00000263309 FAM163AQ96GL9 167 aaPredicted RBP15.18■□□□□ 0.02
CLNS1A-201ENST00000263309 USP40Q9NVE5 1235 aa15.18■□□□□ 0.02
CLNS1A-201ENST00000263309 TLR7Q9NYK1 1049 aaKnown RBP15.18■□□□□ 0.02
CLNS1A-201ENST00000263309 CYP2E1P05181 493 aaPredicted RBP15.17■□□□□ 0.02
CLNS1A-201ENST00000263309 PRDX5P30044 214 aa15.17■□□□□ 0.02
CLNS1A-201ENST00000263309 SLC9C2Q5TAH2 1124 aa15.17■□□□□ 0.02
CLNS1A-201ENST00000263309 TBC1D9Q6ZT07 1266 aa15.17■□□□□ 0.02
CLNS1A-201ENST00000263309 USP48Q86UV5 1035 aa15.17■□□□□ 0.02
CLNS1A-201ENST00000263309 GGA3Q9NZ52 723 aa15.17■□□□□ 0.02
CLNS1A-201ENST00000263309 AOX1Q06278 1338 aa15.17■□□□□ 0.02
CLNS1A-201ENST00000263309 HIP1O00291 1037 aa15.16■□□□□ 0.02
CLNS1A-201ENST00000263309 PPP1R12BO60237 982 aaPredicted RBP15.16■□□□□ 0.02
CLNS1A-201ENST00000263309 CYP7A1P22680 504 aa15.16■□□□□ 0.02
CLNS1A-201ENST00000263309 TTLL12Q14166 644 aaPredicted RBP15.16■□□□□ 0.02
CLNS1A-201ENST00000263309 NBPF9Q3BBW0 867 aa15.16■□□□□ 0.02
CLNS1A-201ENST00000263309 FKBP1CQ5VVH2 108 aa15.16■□□□□ 0.02
CLNS1A-201ENST00000263309 TRPM4Q8TD43 1214 aa15.16■□□□□ 0.02
CLNS1A-201ENST00000263309 EVI5LQ96CN4 794 aa15.16■□□□□ 0.02
CLNS1A-201ENST00000263309 PRMT6Q96LA8 375 aaPredicted RBP15.16■□□□□ 0.02
CLNS1A-201ENST00000263309 TRIM34Q9BYJ4 488 aa15.16■□□□□ 0.02
CLNS1A-201ENST00000263309 COL4A5P29400 1685 aa15.16■□□□□ 0.02
CLNS1A-201ENST00000263309 PDE1AP54750 535 aa15.15■□□□□ 0.02
CLNS1A-201ENST00000263309 ZSCAN29Q8IWY8 852 aaPredicted RBP15.15■□□□□ 0.02
CLNS1A-201ENST00000263309 MAGEB6Q8N7X4 407 aa15.15■□□□□ 0.02
CLNS1A-201ENST00000263309 NSUN4Q96CB9 384 aaKnown RBP15.15■□□□□ 0.02
CLNS1A-201ENST00000263309 FSD1Q9BTV5 496 aa15.15■□□□□ 0.02
CLNS1A-201ENST00000263309 TDRD3Q9H7E2 651 aaKnown RBP15.15■□□□□ 0.02
CLNS1A-201ENST00000263309 ZNF70Q9UC06 446 aaPredicted RBP15.15■□□□□ 0.02
CLNS1A-201ENST00000263309 STAP2Q9UGK3 403 aa15.15■□□□□ 0.02
CLNS1A-201ENST00000263309 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms