RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 SYT10Q6XYQ8 523 aa10.6□□□□□ -0.71
MSH4-201ENST00000263187 ZCRB1Q8TBF4 217 aaKnown RBP10.6□□□□□ -0.71
MSH4-201ENST00000263187 CHMP4CQ96CF2 233 aa10.6□□□□□ -0.71
MSH4-201ENST00000263187 ST7Q9NRC1 585 aa10.6□□□□□ -0.71
MSH4-201ENST00000263187 KIAA1468Q9P260 1216 aa10.6□□□□□ -0.71
MSH4-201ENST00000263187 PFKFB1P16118 471 aa10.6□□□□□ -0.71
MSH4-201ENST00000263187 LDHAL6AQ6ZMR3 332 aa10.6□□□□□ -0.71
MSH4-201ENST00000263187 HOMER1Q86YM7 354 aa10.6□□□□□ -0.71
MSH4-201ENST00000263187 ZNF274Q96GC6 653 aaPredicted RBP10.6□□□□□ -0.71
MSH4-201ENST00000263187 MROH7-TTC4A0A0A0MT08 1334 aa10.6□□□□□ -0.71
MSH4-201ENST00000263187 CTAGE5O15320 804 aa10.6□□□□□ -0.71
MSH4-201ENST00000263187 ADALQ6DHV7 355 aa10.6□□□□□ -0.71
MSH4-201ENST00000263187 FBXO18Q8NFZ0 1043 aa10.6□□□□□ -0.71
MSH4-201ENST00000263187 MRFAP1L1Q96HT8 127 aa10.6□□□□□ -0.71
MSH4-201ENST00000263187 NAT10Q9H0A0 1025 aaKnown RBP10.6□□□□□ -0.71
MSH4-201ENST00000263187 CNNM1Q9NRU3 951 aa10.6□□□□□ -0.71
MSH4-201ENST00000263187 SLAIN2Q9P270 581 aa10.6□□□□□ -0.71
MSH4-201ENST00000263187 ASAP1Q9ULH1 1129 aa10.6□□□□□ -0.71
MSH4-201ENST00000263187 SALL1Q9NSC2 1324 aa10.59□□□□□ -0.71
MSH4-201ENST00000263187 FOXN1O15353 648 aa10.59□□□□□ -0.71
MSH4-201ENST00000263187 ARMCX5Q6P1M9 558 aa10.59□□□□□ -0.71
MSH4-201ENST00000263187 CYB5R4Q7L1T6 521 aa10.59□□□□□ -0.71
MSH4-201ENST00000263187 DNAJC10Q8IXB1 793 aa10.59□□□□□ -0.71
MSH4-201ENST00000263187 CCAR2Q8N163 923 aaKnown RBP10.59□□□□□ -0.71
MSH4-201ENST00000263187 DPF2Q92785 391 aa10.59□□□□□ -0.71
MSH4-201ENST00000263187 ALG1Q9BT22 464 aa10.59□□□□□ -0.71
MSH4-201ENST00000263187 GREM2Q9H772 168 aa10.59□□□□□ -0.71
MSH4-201ENST00000263187 MCAMP43121 646 aa10.59□□□□□ -0.71
MSH4-201ENST00000263187 IFIT5Q13325 482 aaKnown RBP10.59□□□□□ -0.71
MSH4-201ENST00000263187 HLFQ16534 295 aa10.59□□□□□ -0.71
MSH4-201ENST00000263187 BRINP3Q76B58 766 aa10.59□□□□□ -0.71
MSH4-201ENST00000263187 TBC1D10CQ8IV04 446 aa10.59□□□□□ -0.71
MSH4-201ENST00000263187 NCOA7Q8NI08 942 aa10.59□□□□□ -0.71
MSH4-201ENST00000263187 RTEL1Q9NZ71 1219 aa10.59□□□□□ -0.71
MSH4-201ENST00000263187 IQSEC3Q9UPP2 1182 aaPredicted RBP10.59□□□□□ -0.71
MSH4-201ENST00000263187 CDC27P30260 824 aa10.59□□□□□ -0.71
MSH4-201ENST00000263187 CTDSPL2Q05D32 466 aa10.59□□□□□ -0.71
MSH4-201ENST00000263187 DMTNQ08495 405 aa10.59□□□□□ -0.71
MSH4-201ENST00000263187 TRDNQ13061 729 aa10.59□□□□□ -0.71
MSH4-201ENST00000263187 ZNF827Q17R98 1081 aa10.59□□□□□ -0.71
MSH4-201ENST00000263187 ANO1Q5XXA6 986 aa10.59□□□□□ -0.71
MSH4-201ENST00000263187 ZNF771Q7L3S4 317 aaPredicted RBP10.59□□□□□ -0.71
MSH4-201ENST00000263187 PDILTQ8N807 584 aa10.59□□□□□ -0.71
MSH4-201ENST00000263187 GOLGB1Q14789 3259 aaKnown RBP10.59□□□□□ -0.71
MSH4-201ENST00000263187 SERPINC1P01008 464 aa10.58□□□□□ -0.72
MSH4-201ENST00000263187 ERCC6LQ2NKX8 1250 aa10.58□□□□□ -0.72
MSH4-201ENST00000263187 KMT5BQ4FZB7 885 aa10.58□□□□□ -0.72
MSH4-201ENST00000263187 CCDC191Q8NCU4 936 aa10.58□□□□□ -0.72
MSH4-201ENST00000263187 PAXBP1Q9Y5B6 917 aa10.58□□□□□ -0.72
MSH4-201ENST00000263187 PHRF1Q9P1Y6 1649 aaKnown RBP10.58□□□□□ -0.72
MSH4-201ENST00000263187 TMEM232C9JQI7 657 aa10.58□□□□□ -0.72
MSH4-201ENST00000263187 SFPQP23246 707 aaKnown RBP eCLIP10.58□□□□□ -0.72
MSH4-201ENST00000263187 METAP2P50579 478 aaKnown RBP eCLIP10.58□□□□□ -0.72
MSH4-201ENST00000263187 KIF23Q02241 960 aaPredicted RBP10.58□□□□□ -0.72
MSH4-201ENST00000263187 CFAP100Q494V2 611 aa10.58□□□□□ -0.72
MSH4-201ENST00000263187 E4F1Q66K89 784 aaPredicted RBP10.58□□□□□ -0.72
MSH4-201ENST00000263187 SARM1Q6SZW1 724 aa10.58□□□□□ -0.72
MSH4-201ENST00000263187 MB21D2Q8IYB1 491 aaPredicted RBP10.58□□□□□ -0.72
MSH4-201ENST00000263187 GRAMD1CQ8IYS0 662 aa10.58□□□□□ -0.72
MSH4-201ENST00000263187 AGXT2Q9BYV1 514 aa10.58□□□□□ -0.72
MSH4-201ENST00000263187 EPC1Q9H2F5 836 aa10.58□□□□□ -0.72
MSH4-201ENST00000263187 CTNNA3Q9UI47 895 aa10.58□□□□□ -0.72
MSH4-201ENST00000263187 hCG_1642624A0A1W2PR95 340 aa10.57□□□□□ -0.72
MSH4-201ENST00000263187 ITGA6P23229 1130 aa10.57□□□□□ -0.72
MSH4-201ENST00000263187 SYKP43405 635 aa10.57□□□□□ -0.72
MSH4-201ENST00000263187 VPS37DQ86XT2 251 aa10.57□□□□□ -0.72
MSH4-201ENST00000263187 NBPF3Q9H094 633 aa10.57□□□□□ -0.72
MSH4-201ENST00000263187 PIH1D3Q9NQM4 214 aaKnown RBP10.57□□□□□ -0.72
MSH4-201ENST00000263187 WWC3Q9ULE0 1092 aa10.57□□□□□ -0.72
MSH4-201ENST00000263187 KCNJ14Q9UNX9 436 aa10.57□□□□□ -0.72
MSH4-201ENST00000263187 TBC1D2BQ9UPU7 963 aa10.57□□□□□ -0.72
MSH4-201ENST00000263187 PHKA1P46020 1223 aa10.57□□□□□ -0.72
MSH4-201ENST00000263187 EVA1CP58658 441 aa10.57□□□□□ -0.72
MSH4-201ENST00000263187 FBXO38Q6PIJ6 1188 aa10.57□□□□□ -0.72
MSH4-201ENST00000263187 KIF18AQ8NI77 898 aa10.57□□□□□ -0.72
MSH4-201ENST00000263187 SLC26A6Q9BXS9 759 aa10.57□□□□□ -0.72
MSH4-201ENST00000263187 COBLO75128 1261 aa10.57□□□□□ -0.72
MSH4-201ENST00000263187 GRIN1Q05586 938 aa10.57□□□□□ -0.72
MSH4-201ENST00000263187 KRT40Q6A162 431 aa10.57□□□□□ -0.72
MSH4-201ENST00000263187 KCNG4Q8TDN1 519 aa10.57□□□□□ -0.72
MSH4-201ENST00000263187 FBXO41Q8TF61 875 aa10.57□□□□□ -0.72
MSH4-201ENST00000263187 APPBP2Q92624 585 aa10.57□□□□□ -0.72
MSH4-201ENST00000263187 DNAI1Q9UI46 699 aa10.57□□□□□ -0.72
MSH4-201ENST00000263187 CDC25BP30305 580 aa10.56□□□□□ -0.72
MSH4-201ENST00000263187 GUCY1A2P33402 732 aa10.56□□□□□ -0.72
MSH4-201ENST00000263187 FANCCQ00597 558 aa10.56□□□□□ -0.72
MSH4-201ENST00000263187 AXDND1Q5T1B0 1012 aaPredicted RBP10.56□□□□□ -0.72
MSH4-201ENST00000263187 TRMT44Q8IYL2 757 aaKnown RBP10.56□□□□□ -0.72
MSH4-201ENST00000263187 PPP1R13BQ96KQ4 1090 aa10.56□□□□□ -0.72
MSH4-201ENST00000263187 UTP14AQ9BVJ6 771 aaKnown RBP10.56□□□□□ -0.72
MSH4-201ENST00000263187 AFDNP55196 1824 aaKnown RBP10.56□□□□□ -0.72
MSH4-201ENST00000263187 ZNF532Q9HCE3 1301 aa10.56□□□□□ -0.72
MSH4-201ENST00000263187 SMIM22K7EJ46 135 aa10.56□□□□□ -0.72
MSH4-201ENST00000263187 PRKAB2O43741 272 aa10.56□□□□□ -0.72
MSH4-201ENST00000263187 DHX16O60231 1041 aaKnown RBP10.56□□□□□ -0.72
MSH4-201ENST00000263187 TOM1O60784 492 aa10.56□□□□□ -0.72
MSH4-201ENST00000263187 CAVIN2O95810 425 aa10.56□□□□□ -0.72
MSH4-201ENST00000263187 RBM6P78332 1123 aaKnown RBP10.56□□□□□ -0.72
MSH4-201ENST00000263187 LONRF3Q496Y0 759 aa10.56□□□□□ -0.72
MSH4-201ENST00000263187 SHC4Q6S5L8 630 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms