RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 HPS5Q9UPZ3 1129 aa15.3■□□□□ 0.04
TRAF4-202ENST00000262396 CSADQ9Y600 493 aa15.3■□□□□ 0.04
TRAF4-202ENST00000262396 MAP3K11Q16584 847 aa15.29■□□□□ 0.04
TRAF4-202ENST00000262396 RABL6Q3YEC7 729 aaPredicted RBP15.29■□□□□ 0.04
TRAF4-202ENST00000262396 SPDYE2Q495Y8 402 aa15.29■□□□□ 0.04
TRAF4-202ENST00000262396 IFNL1Q8IU54 200 aa15.29■□□□□ 0.04
TRAF4-202ENST00000262396 ANKRD44Q8N8A2 993 aa15.29■□□□□ 0.04
TRAF4-202ENST00000262396 HOOK2Q96ED9 719 aa15.29■□□□□ 0.04
TRAF4-202ENST00000262396 ELP3Q9H9T3 547 aa15.29■□□□□ 0.04
TRAF4-202ENST00000262396 GNL3LQ9NVN8 582 aaKnown RBP15.29■□□□□ 0.04
TRAF4-202ENST00000262396 USP2O75604 605 aaPredicted RBP15.28■□□□□ 0.04
TRAF4-202ENST00000262396 BCAMP50895 628 aa15.28■□□□□ 0.04
TRAF4-202ENST00000262396 FBXO33Q7Z6M2 555 aa15.28■□□□□ 0.04
TRAF4-202ENST00000262396 API5Q9BZZ5 524 aaKnown RBP15.28■□□□□ 0.04
TRAF4-202ENST00000262396 USP44Q9H0E7 712 aa15.28■□□□□ 0.04
TRAF4-202ENST00000262396 SIL1Q9H173 461 aa15.28■□□□□ 0.04
TRAF4-202ENST00000262396 EYA2O00167 538 aa15.27■□□□□ 0.04
TRAF4-202ENST00000262396 FBXO46Q6PJ61 603 aaPredicted RBP15.27■□□□□ 0.04
TRAF4-202ENST00000262396 OPTNQ96CV9 577 aa15.27■□□□□ 0.04
TRAF4-202ENST00000262396 CDCA7LQ96GN5 454 aa15.27■□□□□ 0.04
TRAF4-202ENST00000262396 TMEM39BQ9GZU3 492 aa15.27■□□□□ 0.04
TRAF4-202ENST00000262396 CEP126Q9P2H0 1117 aa15.27■□□□□ 0.04
TRAF4-202ENST00000262396 TRIM17Q9Y577 477 aa15.27■□□□□ 0.04
TRAF4-202ENST00000262396 MAP3K9P80192 1104 aa15.26■□□□□ 0.03
TRAF4-202ENST00000262396 HDLBPQ00341 1268 aaKnown RBP15.26■□□□□ 0.03
TRAF4-202ENST00000262396 NOM1Q5C9Z4 860 aaKnown RBP15.26■□□□□ 0.03
TRAF4-202ENST00000262396 WDR66Q8TBY9 1149 aa15.26■□□□□ 0.03
TRAF4-202ENST00000262396 LPIN2Q92539 896 aa15.26■□□□□ 0.03
TRAF4-202ENST00000262396 ERO1AQ96HE7 468 aa15.26■□□□□ 0.03
TRAF4-202ENST00000262396 NOB1Q9ULX3 412 aaKnown RBP15.26■□□□□ 0.03
TRAF4-202ENST00000262396 AOX1Q06278 1338 aa15.25■□□□□ 0.03
TRAF4-202ENST00000262396 CT47B1P0C2W7 299 aaPredicted RBP15.25■□□□□ 0.03
TRAF4-202ENST00000262396 CACNB3P54284 484 aa15.25■□□□□ 0.03
TRAF4-202ENST00000262396 ARHGEF6Q15052 776 aa15.25■□□□□ 0.03
TRAF4-202ENST00000262396 SUGT1Q9Y2Z0 365 aa15.25■□□□□ 0.03
TRAF4-202ENST00000262396 ATP2B3Q16720 1220 aa15.24■□□□□ 0.03
TRAF4-202ENST00000262396 DCAF15Q66K64 600 aa15.24■□□□□ 0.03
TRAF4-202ENST00000262396 OTUD5Q96G74 571 aa15.24■□□□□ 0.03
TRAF4-202ENST00000262396 CFHR5Q9BXR6 569 aa15.24■□□□□ 0.03
TRAF4-202ENST00000262396 IGF2BP3O00425 579 aaKnown RBP eCLIP15.23■□□□□ 0.03
TRAF4-202ENST00000262396 GTF2A2P52657 109 aa15.23■□□□□ 0.03
TRAF4-202ENST00000262396 VGLL2Q8N8G2 317 aa15.23■□□□□ 0.03
TRAF4-202ENST00000262396 ZDHHC15Q96MV8 337 aa15.23■□□□□ 0.03
TRAF4-202ENST00000262396 WRNIP1Q96S55 665 aa15.23■□□□□ 0.03
TRAF4-202ENST00000262396 R3HDMLQ9H3Y0 253 aa15.23■□□□□ 0.03
TRAF4-202ENST00000262396 ZFYVE28Q9HCC9 887 aa15.23■□□□□ 0.03
TRAF4-202ENST00000262396 SSC5DA1L4H1 1573 aa15.23■□□□□ 0.03
TRAF4-202ENST00000262396 ZNF646O15015 1829 aaPredicted RBP15.22■□□□□ 0.03
TRAF4-202ENST00000262396 KIF16BQ96L93 1317 aa15.22■□□□□ 0.03
TRAF4-202ENST00000262396 CCL15-CCL14A0A0B4J2E2 113 aa15.22■□□□□ 0.03
TRAF4-202ENST00000262396 LDHBP07195 334 aaKnown RBP15.22■□□□□ 0.03
TRAF4-202ENST00000262396 CRHR2Q13324 411 aa15.22■□□□□ 0.03
TRAF4-202ENST00000262396 VGLL4Q14135 290 aa15.22■□□□□ 0.03
TRAF4-202ENST00000262396 TAF1CQ15572 869 aaPredicted RBP15.22■□□□□ 0.03
TRAF4-202ENST00000262396 GRIK5Q16478 980 aa15.22■□□□□ 0.03
TRAF4-202ENST00000262396 CCL15Q16663 113 aa15.22■□□□□ 0.03
TRAF4-202ENST00000262396 EFCC1Q9HA90 598 aa15.22■□□□□ 0.03
TRAF4-202ENST00000262396 A0A1B0GUL6 1792 aa15.21■□□□□ 0.03
TRAF4-202ENST00000262396 IL15P40933 162 aaPredicted RBP15.21■□□□□ 0.03
TRAF4-202ENST00000262396 SP3Q02447 781 aa15.21■□□□□ 0.03
TRAF4-202ENST00000262396 CD99L2Q8TCZ2 262 aa15.21■□□□□ 0.03
TRAF4-202ENST00000262396 MRIQ9BWK5 157 aa15.21■□□□□ 0.03
TRAF4-202ENST00000262396 FBXO3Q9UK99 471 aa15.21■□□□□ 0.03
TRAF4-202ENST00000262396 LRRFIP2Q9Y608 721 aaKnown RBP15.21■□□□□ 0.03
TRAF4-202ENST00000262396 IPO8O15397 1037 aaKnown RBP15.2■□□□□ 0.02
TRAF4-202ENST00000262396 CIAO1O76071 339 aa15.2■□□□□ 0.02
TRAF4-202ENST00000262396 GNAI3P08754 354 aa15.2■□□□□ 0.02
TRAF4-202ENST00000262396 FGFR2P21802 821 aa15.2■□□□□ 0.02
TRAF4-202ENST00000262396 GJA5P36382 358 aa15.2■□□□□ 0.02
TRAF4-202ENST00000262396 KIF22Q14807 665 aa15.2■□□□□ 0.02
TRAF4-202ENST00000262396 HHIPL2Q6UWX4 724 aa15.2■□□□□ 0.02
TRAF4-202ENST00000262396 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.2■□□□□ 0.02
TRAF4-202ENST00000262396 FAM83AQ86UY5 434 aa15.2■□□□□ 0.02
TRAF4-202ENST00000262396 CDAN1Q8IWY9 1227 aa15.2■□□□□ 0.02
TRAF4-202ENST00000262396 ZGPATQ8N5A5 531 aaKnown RBP15.2■□□□□ 0.02
TRAF4-202ENST00000262396 TEPSINQ96N21 525 aa15.2■□□□□ 0.02
TRAF4-202ENST00000262396 ZNF341Q9BYN7 854 aa15.2■□□□□ 0.02
TRAF4-202ENST00000262396 DENND2AQ9ULE3 1009 aa15.2■□□□□ 0.02
TRAF4-202ENST00000262396 ECM29Q5VYK3 1845 aa15.2■□□□□ 0.02
TRAF4-202ENST00000262396 CCER2I3L3R5 266 aa15.19■□□□□ 0.02
TRAF4-202ENST00000262396 CETPP11597 493 aa15.19■□□□□ 0.02
TRAF4-202ENST00000262396 RFX5P48382 616 aaPredicted RBP15.19■□□□□ 0.02
TRAF4-202ENST00000262396 TCP10Q12799 353 aa15.19■□□□□ 0.02
TRAF4-202ENST00000262396 SNAPC2Q13487 334 aa15.19■□□□□ 0.02
TRAF4-202ENST00000262396 GORABQ5T7V8 394 aa15.19■□□□□ 0.02
TRAF4-202ENST00000262396 FKBP1CQ5VVH2 108 aa15.19■□□□□ 0.02
TRAF4-202ENST00000262396 OTOP1Q7RTM1 612 aa15.19■□□□□ 0.02
TRAF4-202ENST00000262396 ERO1BQ86YB8 467 aa15.19■□□□□ 0.02
TRAF4-202ENST00000262396 DZIP1Q86YF9 867 aaKnown RBP15.19■□□□□ 0.02
TRAF4-202ENST00000262396 SLF2Q8IX21 1173 aa15.19■□□□□ 0.02
TRAF4-202ENST00000262396 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.19■□□□□ 0.022e-6■■□□□ 12.6
TRAF4-202ENST00000262396 CNKSR2Q8WXI2 1034 aa15.19■□□□□ 0.02
TRAF4-202ENST00000262396 FRAT1Q92837 279 aaPredicted RBP15.19■□□□□ 0.02
TRAF4-202ENST00000262396 INTS3Q68E01 1043 aaKnown RBP15.18■□□□□ 0.02
TRAF4-202ENST00000262396 APOBEC3HQ6NTF7 200 aaKnown RBP15.18■□□□□ 0.02
TRAF4-202ENST00000262396 MIGA2Q7L4E1 593 aa15.18■□□□□ 0.02
TRAF4-202ENST00000262396 ZSCAN29Q8IWY8 852 aaPredicted RBP15.18■□□□□ 0.02
TRAF4-202ENST00000262396 ZKSCAN4Q969J2 545 aaPredicted RBP15.18■□□□□ 0.02
TRAF4-202ENST00000262396 USP40Q9NVE5 1235 aa15.18■□□□□ 0.02
TRAF4-202ENST00000262396 ABCF2Q9UG63 623 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms