RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 CCDC129Q6ZRS4 1044 aa33.15■■■□□ 2.9
SMARCD3-201ENST00000262188 ADGRA1Q86SQ6 560 aa33.15■■■□□ 2.9
SMARCD3-201ENST00000262188 BACH2Q9BYV9 841 aa33.15■■■□□ 2.9
SMARCD3-201ENST00000262188 PSMD14O00487 310 aa33.14■■■□□ 2.9
SMARCD3-201ENST00000262188 SBF1O95248 1867 aa33.14■■■□□ 2.9
SMARCD3-201ENST00000262188 LDHBP07195 334 aaKnown RBP33.14■■■□□ 2.9
SMARCD3-201ENST00000262188 STRIP1Q5VSL9 837 aa33.14■■■□□ 2.9
SMARCD3-201ENST00000262188 DDX24Q9GZR7 859 aaKnown RBP eCLIP33.14■■■□□ 2.9
SMARCD3-201ENST00000262188 TCRBV5S4A2TA0A5A2 114 aa33.14■■■□□ 2.9
SMARCD3-201ENST00000262188 LMNB1P20700 586 aa33.14■■■□□ 2.9
SMARCD3-201ENST00000262188 DIXDC1Q155Q3 683 aa33.14■■■□□ 2.9
SMARCD3-201ENST00000262188 OSBP2Q969R2 916 aa33.14■■■□□ 2.9
SMARCD3-201ENST00000262188 CXCL9Q07325 125 aa33.13■■■□□ 2.89
SMARCD3-201ENST00000262188 NSUN4Q96CB9 384 aaKnown RBP33.13■■■□□ 2.89
SMARCD3-201ENST00000262188 ESYT1Q9BSJ8 1104 aa33.13■■■□□ 2.89
SMARCD3-201ENST00000262188 PUS7LQ9H0K6 701 aaKnown RBP33.12■■■□□ 2.89
SMARCD3-201ENST00000262188 ZBTB12Q9Y330 459 aaPredicted RBP33.12■■■□□ 2.89
SMARCD3-201ENST00000262188 M0R2C6 588 aa33.12■■■□□ 2.89
SMARCD3-201ENST00000262188 ZMYM1Q5SVZ6 1142 aa33.12■■■□□ 2.89
SMARCD3-201ENST00000262188 ZNF589Q86UQ0 364 aaPredicted RBP33.12■■■□□ 2.89
SMARCD3-201ENST00000262188 TBC1D22AQ8WUA7 517 aa33.12■■■□□ 2.89
SMARCD3-201ENST00000262188 CYP7A1P22680 504 aa33.11■■■□□ 2.89
SMARCD3-201ENST00000262188 CASC1Q6TDU7 716 aa33.11■■■□□ 2.89
SMARCD3-201ENST00000262188 DZIP1Q86YF9 867 aaKnown RBP33.11■■■□□ 2.89
SMARCD3-201ENST00000262188 ZGPATQ8N5A5 531 aaKnown RBP33.11■■■□□ 2.89
SMARCD3-201ENST00000262188 RFX7Q2KHR2 1363 aa33.11■■■□□ 2.89
SMARCD3-201ENST00000262188 KIAA0825Q8IV33 1275 aa33.1■■■□□ 2.89
SMARCD3-201ENST00000262188 MIGA1Q8NAN2 632 aa33.1■■■□□ 2.89
SMARCD3-201ENST00000262188 RNF181Q9P0P0 153 aa33.1■■■□□ 2.89
SMARCD3-201ENST00000262188 MFAP1P55081 439 aaKnown RBP33.1■■■□□ 2.89
SMARCD3-201ENST00000262188 NAA16Q6N069 864 aaPredicted RBP33.1■■■□□ 2.89
SMARCD3-201ENST00000262188 SCNN1DP51172 638 aa33.09■■■□□ 2.89
SMARCD3-201ENST00000262188 SPTY2D1Q68D10 685 aaPredicted RBP33.09■■■□□ 2.89
SMARCD3-201ENST00000262188 MAST3O60307 1309 aa33.09■■■□□ 2.89
SMARCD3-201ENST00000262188 ZNF541Q9H0D2 1346 aa33.09■■■□□ 2.89
SMARCD3-201ENST00000262188 HIP1O00291 1037 aa33.09■■■□□ 2.89
SMARCD3-201ENST00000262188 PSME4Q14997 1843 aa33.08■■■□□ 2.89
SMARCD3-201ENST00000262188 SGSM2O43147 1006 aa33.08■■■□□ 2.89
SMARCD3-201ENST00000262188 ZSCAN25Q6NSZ9 544 aa33.08■■■□□ 2.89
SMARCD3-201ENST00000262188 APPBP2Q92624 585 aa33.08■■■□□ 2.89
SMARCD3-201ENST00000262188 ZFYP08048 801 aaPredicted RBP33.07■■■□□ 2.88
SMARCD3-201ENST00000262188 UBE3CQ15386 1083 aa33.07■■■□□ 2.88
SMARCD3-201ENST00000262188 C9orf131Q5VYM1 1079 aa33.07■■■□□ 2.88
SMARCD3-201ENST00000262188 TTF2Q9UNY4 1162 aaKnown RBP33.07■■■□□ 2.88
SMARCD3-201ENST00000262188 FZD9O00144 591 aa33.07■■■□□ 2.88
SMARCD3-201ENST00000262188 VIL1P09327 827 aaKnown RBP33.07■■■□□ 2.88
SMARCD3-201ENST00000262188 CIAPIN1Q6FI81 312 aa33.06■■■□□ 2.88
SMARCD3-201ENST00000262188 RSBN1LQ6PCB5 846 aaPredicted RBP33.06■■■□□ 2.88
SMARCD3-201ENST00000262188 ADAMTSL1Q8N6G6 1762 aa33.06■■■□□ 2.88
SMARCD3-201ENST00000262188 PCDHAC2Q9Y5I4 1007 aa33.05■■■□□ 2.88
SMARCD3-201ENST00000262188 LRRFIP1Q32MZ4 808 aaKnown RBP33.05■■■□□ 2.88
SMARCD3-201ENST00000262188 MCMDC2Q4G0Z9 681 aa33.05■■■□□ 2.88
SMARCD3-201ENST00000262188 GJA3Q9Y6H8 435 aa33.05■■■□□ 2.88
SMARCD3-201ENST00000262188 MAST2Q6P0Q8 1798 aa33.04■■■□□ 2.88
SMARCD3-201ENST00000262188 DICER1Q9UPY3 1922 aaKnown RBP33.04■■■□□ 2.88
SMARCD3-201ENST00000262188 DYNLL1P63167 89 aaKnown RBP33.04■■■□□ 2.88
SMARCD3-201ENST00000262188 HELLSQ9NRZ9 838 aa33.03■■■□□ 2.88
SMARCD3-201ENST00000262188 SHTN1A0MZ66 631 aa33.03■■■□□ 2.88
SMARCD3-201ENST00000262188 GRIN3BO60391 1043 aa33.03■■■□□ 2.88
SMARCD3-201ENST00000262188 RUFY2Q8WXA3 655 aa33.03■■■□□ 2.88
SMARCD3-201ENST00000262188 ARMT1Q9H993 441 aa33.03■■■□□ 2.88
SMARCD3-201ENST00000262188 MYH2Q9UKX2 1941 aa33.02■■■□□ 2.88
SMARCD3-201ENST00000262188 MBD4O95243 580 aa33.02■■■□□ 2.88
SMARCD3-201ENST00000262188 EIF6P56537 245 aaKnown RBP33.02■■■□□ 2.88
SMARCD3-201ENST00000262188 VPS53Q5VIR6 699 aa33.02■■■□□ 2.88
SMARCD3-201ENST00000262188 ANO2Q9NQ90 1003 aa33.02■■■□□ 2.88
SMARCD3-201ENST00000262188 LCORLQ8N3X6 602 aa33.01■■■□□ 2.88
SMARCD3-201ENST00000262188 AATFQ9NY61 560 aaKnown RBP eCLIP33.01■■■□□ 2.88
SMARCD3-201ENST00000262188 GPAA1O43292 621 aa33.01■■■□□ 2.87
SMARCD3-201ENST00000262188 FKBP1AP62942 108 aaKnown RBP33.01■■■□□ 2.87
SMARCD3-201ENST00000262188 PTH1RQ03431 593 aa33.01■■■□□ 2.87
SMARCD3-201ENST00000262188 GMLQ99445 158 aa33.01■■■□□ 2.87
SMARCD3-201ENST00000262188 TIAM2Q8IVF5 1701 aa33■■■□□ 2.87
SMARCD3-201ENST00000262188 CCDC171Q6TFL3 1326 aa32.99■■■□□ 2.87
SMARCD3-201ENST00000262188 AIDAQ96BJ3 306 aa32.99■■■□□ 2.87
SMARCD3-201ENST00000262188 SUGT1Q9Y2Z0 365 aa32.99■■■□□ 2.87
SMARCD3-201ENST00000262188 TNIP1Q15025 636 aa32.98■■■□□ 2.87
SMARCD3-201ENST00000262188 DAGLAQ9Y4D2 1042 aa32.98■■■□□ 2.87
SMARCD3-201ENST00000262188 MROH7-TTC4A0A0A0MT08 1334 aa32.98■■■□□ 2.87
SMARCD3-201ENST00000262188 TICAM2Q86XR7 235 aa32.98■■■□□ 2.87
SMARCD3-201ENST00000262188 FAM43AQ8N2R8 423 aa32.98■■■□□ 2.87
SMARCD3-201ENST00000262188 RAD50Q92878 1312 aa32.97■■■□□ 2.87
SMARCD3-201ENST00000262188 MAGEB6P1A0A0J9YX57 407 aa32.97■■■□□ 2.87
SMARCD3-201ENST00000262188 PRKAB2O43741 272 aa32.97■■■□□ 2.87
SMARCD3-201ENST00000262188 RIOK1Q9BRS2 568 aaKnown RBP32.97■■■□□ 2.87
SMARCD3-201ENST00000262188 LSG1Q9H089 658 aaKnown RBP32.97■■■□□ 2.87
SMARCD3-201ENST00000262188 GMPSP49915 693 aaPredicted RBP32.96■■■□□ 2.87
SMARCD3-201ENST00000262188 GSTO1P78417 241 aa32.96■■■□□ 2.87
SMARCD3-201ENST00000262188 FOXP2O15409 715 aa32.96■■■□□ 2.87
SMARCD3-201ENST00000262188 BTDP43251 543 aa32.96■■■□□ 2.87
SMARCD3-201ENST00000262188 CRKP46108 304 aa32.96■■■□□ 2.87
SMARCD3-201ENST00000262188 STRBPQ96SI9 672 aaKnown RBP32.96■■■□□ 2.87
SMARCD3-201ENST00000262188 RBM5P52756 815 aaKnown RBP eCLIP32.94■■■□□ 2.86
SMARCD3-201ENST00000262188 TEKT1Q969V4 418 aa32.94■■■□□ 2.86
SMARCD3-201ENST00000262188 GAKO14976 1311 aa32.94■■■□□ 2.86
SMARCD3-201ENST00000262188 MYO3BQ8WXR4 1341 aa32.94■■■□□ 2.86
SMARCD3-201ENST00000262188 DDNO94850 711 aaPredicted RBP32.93■■■□□ 2.86
SMARCD3-201ENST00000262188 AGBL3Q8NEM8 1001 aa32.93■■■□□ 2.86
SMARCD3-201ENST00000262188 SH3RF3Q8TEJ3 882 aaPredicted RBP32.93■■■□□ 2.86
SMARCD3-201ENST00000262188 LDHCP07864 332 aa32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms