RNA–Protein interactions for RNA: ENST00000262053.7

ATF1-201, Transcript of activating transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-201ENST00000262053 LINC01387J3KSC0 135 aa3.5□□□□□ -1.85
ATF1-201ENST00000262053 ZC3H6P61129 1189 aaKnown RBP3.5□□□□□ -1.85
ATF1-201ENST00000262053 SHISA2Q6UWI4 295 aa3.5□□□□□ -1.85
ATF1-201ENST00000262053 DCAF11Q8TEB1 546 aa3.5□□□□□ -1.85
ATF1-201ENST00000262053 SLC7A3Q8WY07 619 aa3.5□□□□□ -1.85
ATF1-201ENST00000262053 ASIC4Q96FT7 647 aa3.5□□□□□ -1.85
ATF1-201ENST00000262053 FRMD6Q96NE9 622 aa3.5□□□□□ -1.85
ATF1-201ENST00000262053 RBSNQ9H1K0 784 aa3.5□□□□□ -1.85
ATF1-201ENST00000262053 DNAJC25Q9H1X3 360 aa3.5□□□□□ -1.85
ATF1-201ENST00000262053 ABCB6Q9NP58 842 aa3.5□□□□□ -1.85
ATF1-201ENST00000262053 METTL5Q9NRN9 209 aaKnown RBP3.5□□□□□ -1.85
ATF1-201ENST00000262053 PARP2Q9UGN5 583 aa3.5□□□□□ -1.85
ATF1-201ENST00000262053 DEAF1O75398 565 aaPredicted RBP3.49□□□□□ -1.85
ATF1-201ENST00000262053 SMNDC1O75940 238 aaKnown RBP eCLIP3.49□□□□□ -1.85
ATF1-201ENST00000262053 FCGRTP55899 365 aa3.49□□□□□ -1.85
ATF1-201ENST00000262053 ATP2B2Q01814 1243 aa3.49□□□□□ -1.85
ATF1-201ENST00000262053 TSNAXIP1Q2TAA8 658 aa3.49□□□□□ -1.85
ATF1-201ENST00000262053 MSL1Q68DK7 614 aa3.49□□□□□ -1.85
ATF1-201ENST00000262053 NLRP2Q9NX02 1062 aa3.49□□□□□ -1.85
ATF1-201ENST00000262053 LOC105371045A0A1W2PR82 267 aa3.49□□□□□ -1.85
ATF1-201ENST00000262053 DDX3YO15523 660 aaKnown RBP3.49□□□□□ -1.85
ATF1-201ENST00000262053 SORBS3O60504 671 aa3.49□□□□□ -1.85
ATF1-201ENST00000262053 NEFLP07196 543 aa3.49□□□□□ -1.85
ATF1-201ENST00000262053 GNA15P30679 374 aa3.49□□□□□ -1.85
ATF1-201ENST00000262053 XPCQ01831 940 aaPredicted RBP3.49□□□□□ -1.85
ATF1-201ENST00000262053 PCSK7Q16549 785 aa3.49□□□□□ -1.85
ATF1-201ENST00000262053 VN1R5Q7Z5H4 357 aa3.49□□□□□ -1.85
ATF1-201ENST00000262053 CCNJLQ8IV13 435 aa3.49□□□□□ -1.85
ATF1-201ENST00000262053 GALNT11Q8NCW6 608 aa3.49□□□□□ -1.85
ATF1-201ENST00000262053 PMEPA1Q969W9 287 aa3.49□□□□□ -1.85
ATF1-201ENST00000262053 FRRS1LQ9P0K9 344 aa3.49□□□□□ -1.85
ATF1-201ENST00000262053 F6X3S4 739 aa3.48□□□□□ -1.85
ATF1-201ENST00000262053 SETDB1Q15047 1291 aa3.48□□□□□ -1.85
ATF1-201ENST00000262053 WFDC8Q8IUA0 241 aa3.48□□□□□ -1.85
ATF1-201ENST00000262053 TMEM102Q8N9M5 508 aaPredicted RBP3.48□□□□□ -1.85
ATF1-201ENST00000262053 WFDC12Q8WWY7 111 aa3.48□□□□□ -1.85
ATF1-201ENST00000262053 A0A096LPE4 126 aa3.48□□□□□ -1.85
ATF1-201ENST00000262053 A0A1W2PPZ6 126 aa3.48□□□□□ -1.85
ATF1-201ENST00000262053 ECEL1O95672 775 aa3.48□□□□□ -1.85
ATF1-201ENST00000262053 C8AP07357 584 aa3.48□□□□□ -1.85
ATF1-201ENST00000262053 HDLBPQ00341 1268 aaKnown RBP3.48□□□□□ -1.85
ATF1-201ENST00000262053 FAAP100Q0VG06 881 aa3.48□□□□□ -1.85
ATF1-201ENST00000262053 MEI1Q5TIA1 1274 aa3.48□□□□□ -1.85
ATF1-201ENST00000262053 METTL16Q86W50 562 aaKnown RBP3.48□□□□□ -1.85
ATF1-201ENST00000262053 FMR1NBQ8N0W7 255 aaPredicted RBP3.48□□□□□ -1.85
ATF1-201ENST00000262053 C3orf58Q8NDZ4 430 aa3.48□□□□□ -1.85
ATF1-201ENST00000262053 SREK1Q8WXA9 508 aaKnown RBP3.48□□□□□ -1.85
ATF1-201ENST00000262053 BHLHE41Q9C0J9 482 aaPredicted RBP3.48□□□□□ -1.85
ATF1-201ENST00000262053 KCNK4Q9NYG8 393 aa3.48□□□□□ -1.85
ATF1-201ENST00000262053 SOX13Q9UN79 622 aa3.48□□□□□ -1.85
ATF1-201ENST00000262053 SHROOM4Q9ULL8 1493 aa3.47□□□□□ -1.85
ATF1-201ENST00000262053 RBAK-RBAKDNI3L0D1 243 aa3.47□□□□□ -1.85
ATF1-201ENST00000262053 SOX1O00570 391 aaPredicted RBP3.47□□□□□ -1.85
ATF1-201ENST00000262053 ADAM11O75078 769 aa3.47□□□□□ -1.85
ATF1-201ENST00000262053 WNT11O96014 354 aa3.47□□□□□ -1.85
ATF1-201ENST00000262053 CTSHP09668 335 aa3.47□□□□□ -1.85
ATF1-201ENST00000262053 NLRP12P59046 1061 aa3.47□□□□□ -1.85
ATF1-201ENST00000262053 FANCCQ00597 558 aa3.47□□□□□ -1.85
ATF1-201ENST00000262053 ZNF423Q2M1K9 1284 aa3.47□□□□□ -1.85
ATF1-201ENST00000262053 KRTAP19-4Q3LI73 84 aa3.47□□□□□ -1.85
ATF1-201ENST00000262053 KIAA0319Q5VV43 1072 aa3.47□□□□□ -1.85
ATF1-201ENST00000262053 BSNDQ8WZ55 320 aa3.47□□□□□ -1.85
ATF1-201ENST00000262053 KLHDC7BQ96G42 594 aa3.47□□□□□ -1.85
ATF1-201ENST00000262053 MRS2Q9HD23 443 aa3.47□□□□□ -1.85
ATF1-201ENST00000262053 AKAP2Q9Y2D5 859 aa3.47□□□□□ -1.85
ATF1-201ENST00000262053 PPME1Q9Y570 386 aa3.47□□□□□ -1.85
ATF1-201ENST00000262053 TM4SF5O14894 197 aa3.46□□□□□ -1.85
ATF1-201ENST00000262053 WISP1O95388 367 aa3.46□□□□□ -1.85
ATF1-201ENST00000262053 USP17L7P0C7H9 530 aa3.46□□□□□ -1.85
ATF1-201ENST00000262053 PTPRAP18433 802 aa3.46□□□□□ -1.85
ATF1-201ENST00000262053 CDC27P30260 824 aa3.46□□□□□ -1.85
ATF1-201ENST00000262053 RAD51AP2Q09MP3 1159 aa3.46□□□□□ -1.85
ATF1-201ENST00000262053 PSMD2Q13200 908 aa3.46□□□□□ -1.85
ATF1-201ENST00000262053 OGFOD2Q6N063 350 aa3.46□□□□□ -1.85
ATF1-201ENST00000262053 TPTE2Q6XPS3 522 aa3.46□□□□□ -1.85
ATF1-201ENST00000262053 DTHD1Q6ZMT9 781 aa3.46□□□□□ -1.85
ATF1-201ENST00000262053 CRELD1Q96HD1 420 aa3.46□□□□□ -1.85
ATF1-201ENST00000262053 TRIM56Q9BRZ2 755 aaKnown RBP3.46□□□□□ -1.85
ATF1-201ENST00000262053 CUX2O14529 1486 aa3.46□□□□□ -1.86
ATF1-201ENST00000262053 TMEM238LA0A1B0GVL6 79 aa3.46□□□□□ -1.86
ATF1-201ENST00000262053 GIPC1O14908 333 aa3.46□□□□□ -1.86
ATF1-201ENST00000262053 FSCN2O14926 492 aa3.46□□□□□ -1.86
ATF1-201ENST00000262053 PAGE1O75459 146 aa3.46□□□□□ -1.86
ATF1-201ENST00000262053 ALX3O95076 343 aa3.46□□□□□ -1.86
ATF1-201ENST00000262053 ERCC5P28715 1186 aaPredicted RBP3.46□□□□□ -1.86
ATF1-201ENST00000262053 SF3A1Q15459 793 aaKnown RBP3.46□□□□□ -1.86
ATF1-201ENST00000262053 ILDR2Q71H61 639 aa3.46□□□□□ -1.86
ATF1-201ENST00000262053 AGGF1Q8N302 714 aaeCLIP3.46□□□□□ -1.86
ATF1-201ENST00000262053 DRC1Q96MC2 740 aa3.46□□□□□ -1.86
ATF1-201ENST00000262053 ZC3H12CQ9C0D7 883 aaKnown RBP3.46□□□□□ -1.86
ATF1-201ENST00000262053 ZNF576Q9H609 170 aa3.46□□□□□ -1.86
ATF1-201ENST00000262053 USP35Q9P2H5 1018 aa3.46□□□□□ -1.86
ATF1-201ENST00000262053 AK5Q9Y6K8 562 aa3.46□□□□□ -1.86
ATF1-201ENST00000262053 DLGAP3O95886 979 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 IGLV1-40P01703 118 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 CTSBP07858 339 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 ESRRAP11474 423 aaPredicted RBP3.45□□□□□ -1.86
ATF1-201ENST00000262053 JUNBP17275 347 aaPredicted RBP3.45□□□□□ -1.86
ATF1-201ENST00000262053 IKBKEQ14164 716 aa3.45□□□□□ -1.86
ATF1-201ENST00000262053 NAALADL2Q58DX5 795 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms