RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 HSPA1LP34931 641 aa16.08■□□□□ 0.17
CUX2-201ENST00000261726 MAGI3Q5TCQ9 1506 aa16.08■□□□□ 0.16
CUX2-201ENST00000261726 XAGE3Q8WTP9 111 aa16.08■□□□□ 0.16
CUX2-201ENST00000261726 LEO1Q8WVC0 666 aaPredicted RBP16.08■□□□□ 0.16
CUX2-201ENST00000261726 WASLO00401 505 aaPredicted RBP16.08■□□□□ 0.16
CUX2-201ENST00000261726 CIB2O75838 187 aa16.08■□□□□ 0.16
CUX2-201ENST00000261726 SYCP2Q9BX26 1530 aa16.08■□□□□ 0.16
CUX2-201ENST00000261726 EBAG9O00559 213 aa16.08■□□□□ 0.16
CUX2-201ENST00000261726 CALCOCO2Q13137 446 aa16.08■□□□□ 0.16
CUX2-201ENST00000261726 MCM9Q9NXL9 1143 aa16.08■□□□□ 0.16
CUX2-201ENST00000261726 BIN2Q9UBW5 565 aaPredicted RBP16.08■□□□□ 0.16
CUX2-201ENST00000261726 MAGEB6Q8N7X4 407 aa16.07■□□□□ 0.16
CUX2-201ENST00000261726 INTS8Q75QN2 995 aaKnown RBP16.07■□□□□ 0.16
CUX2-201ENST00000261726 NBPF11Q86T75 865 aa16.07■□□□□ 0.16
CUX2-201ENST00000261726 STMN2Q93045 179 aa16.07■□□□□ 0.16
CUX2-201ENST00000261726 NIP7Q9Y221 180 aaKnown RBP eCLIP16.07■□□□□ 0.16
CUX2-201ENST00000261726 SATB1Q01826 763 aa16.07■□□□□ 0.16
CUX2-201ENST00000261726 C16orf71Q8IYS4 520 aaPredicted RBP16.07■□□□□ 0.16
CUX2-201ENST00000261726 B4DLN1 442 aa16.07■□□□□ 0.16
CUX2-201ENST00000261726 MRPL12P52815 198 aaKnown RBP16.07■□□□□ 0.16
CUX2-201ENST00000261726 NMIQ13287 307 aaPredicted RBP16.07■□□□□ 0.16
CUX2-201ENST00000261726 SYT10Q6XYQ8 523 aa16.07■□□□□ 0.16
CUX2-201ENST00000261726 VPS52Q8N1B4 723 aa16.07■□□□□ 0.16
CUX2-201ENST00000261726 NLRP3Q96P20 1036 aa16.07■□□□□ 0.16
CUX2-201ENST00000261726 MTUS1Q9ULD2 1270 aa16.07■□□□□ 0.16
CUX2-201ENST00000261726 RTL9Q8NET4 1388 aa16.07■□□□□ 0.16
CUX2-201ENST00000261726 CLGNO14967 610 aa16.07■□□□□ 0.16
CUX2-201ENST00000261726 F13A1P00488 732 aa16.07■□□□□ 0.16
CUX2-201ENST00000261726 VIMP08670 466 aaKnown RBP16.07■□□□□ 0.16
CUX2-201ENST00000261726 APOBRQ0VD83 1088 aa16.07■□□□□ 0.16
CUX2-201ENST00000261726 PPP2R5CQ13362 524 aa16.07■□□□□ 0.16
CUX2-201ENST00000261726 TCOF1Q13428 1488 aaKnown RBP16.07■□□□□ 0.16
CUX2-201ENST00000261726 BIRC3Q13489 604 aa16.06■□□□□ 0.16
CUX2-201ENST00000261726 FANCAO15360 1455 aa16.06■□□□□ 0.16
CUX2-201ENST00000261726 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.06■□□□□ 0.16
CUX2-201ENST00000261726 PPP2R5DQ14738 602 aa16.06■□□□□ 0.16
CUX2-201ENST00000261726 CEP85LQ5SZL2 805 aa16.06■□□□□ 0.16
CUX2-201ENST00000261726 PPANQ9NQ55 473 aaKnown RBP16.06■□□□□ 0.16
CUX2-201ENST00000261726 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.06■□□□□ 0.164e-8■■■■■ 78.6
CUX2-201ENST00000261726 IFNKQ9P0W0 207 aa16.06■□□□□ 0.16
CUX2-201ENST00000261726 SLC39A6Q13433 755 aa16.06■□□□□ 0.16
CUX2-201ENST00000261726 TTC31Q49AM3 519 aaPredicted RBP16.06■□□□□ 0.16
CUX2-201ENST00000261726 MEIS3Q99687 375 aa16.06■□□□□ 0.16
CUX2-201ENST00000261726 PAG1Q9NWQ8 432 aa16.06■□□□□ 0.16
CUX2-201ENST00000261726 VAV2P52735 878 aa16.06■□□□□ 0.16
CUX2-201ENST00000261726 PPARDQ03181 441 aa16.05■□□□□ 0.16
CUX2-201ENST00000261726 PSMD6Q15008 389 aa16.05■□□□□ 0.16
CUX2-201ENST00000261726 COPS6Q7L5N1 327 aa16.05■□□□□ 0.16
CUX2-201ENST00000261726 TBC1D32Q96NH3 1257 aa16.05■□□□□ 0.16
CUX2-201ENST00000261726 TTC21BQ7Z4L5 1316 aa16.05■□□□□ 0.16
CUX2-201ENST00000261726 HPDP32754 393 aaPredicted RBP16.05■□□□□ 0.16
CUX2-201ENST00000261726 CCT6AP40227 531 aaKnown RBP16.05■□□□□ 0.16
CUX2-201ENST00000261726 TNNC1P63316 161 aa16.05■□□□□ 0.16
CUX2-201ENST00000261726 LMBR1LQ6UX01 489 aa16.05■□□□□ 0.16
CUX2-201ENST00000261726 DTHD1Q6ZMT9 781 aa16.05■□□□□ 0.16
CUX2-201ENST00000261726 JAKMIP2Q96AA8 810 aa16.05■□□□□ 0.16
CUX2-201ENST00000261726 FAM204AQ9H8W3 233 aa16.05■□□□□ 0.16
CUX2-201ENST00000261726 RNASE9P60153 205 aaKnown RBP16.05■□□□□ 0.16
CUX2-201ENST00000261726 CCDC110Q8TBZ0 833 aa16.05■□□□□ 0.16
CUX2-201ENST00000261726 ESYT1Q9BSJ8 1104 aa16.05■□□□□ 0.16
CUX2-201ENST00000261726 TYRO3Q06418 890 aa16.05■□□□□ 0.16
CUX2-201ENST00000261726 CTNND2Q9UQB3 1225 aa16.05■□□□□ 0.16
CUX2-201ENST00000261726 FRMD4BQ9Y2L6 1034 aa16.05■□□□□ 0.16
CUX2-201ENST00000261726 CALML3P27482 149 aa16.05■□□□□ 0.16
CUX2-201ENST00000261726 GABPAQ06546 454 aa16.05■□□□□ 0.16
CUX2-201ENST00000261726 ZKSCAN3Q9BRR0 538 aa16.05■□□□□ 0.16
CUX2-201ENST00000261726 NKIRAS1Q9NYS0 192 aa16.05■□□□□ 0.16
CUX2-201ENST00000261726 PA2G4Q9UQ80 394 aaKnown RBP16.05■□□□□ 0.16
CUX2-201ENST00000261726 CHMP2AO43633 222 aa16.04■□□□□ 0.16
CUX2-201ENST00000261726 NUCB1Q02818 461 aa16.04■□□□□ 0.16
CUX2-201ENST00000261726 FNBP1Q96RU3 617 aa16.04■□□□□ 0.16
CUX2-201ENST00000261726 HGSO14964 777 aaPredicted RBP16.04■□□□□ 0.16
CUX2-201ENST00000261726 LACTBP83111 547 aaPredicted RBP16.04■□□□□ 0.16
CUX2-201ENST00000261726 WDR44Q5JSH3 913 aa16.04■□□□□ 0.16
CUX2-201ENST00000261726 HELBQ8NG08 1087 aaPredicted RBP16.04■□□□□ 0.16
CUX2-201ENST00000261726 FAM76AQ8TAV0 307 aa16.04■□□□□ 0.16
CUX2-201ENST00000261726 CLUL1Q15846 466 aa16.04■□□□□ 0.16
CUX2-201ENST00000261726 PPFIBP2Q8ND30 876 aa16.04■□□□□ 0.16
CUX2-201ENST00000261726 TSGA10Q9BZW7 698 aa16.04■□□□□ 0.16
CUX2-201ENST00000261726 DAPK3O43293 454 aa16.03■□□□□ 0.16
CUX2-201ENST00000261726 SPOPO43791 374 aa16.03■□□□□ 0.16
CUX2-201ENST00000261726 CLSTN2Q9H4D0 955 aa16.03■□□□□ 0.16
CUX2-201ENST00000261726 SAP30BPQ9UHR5 308 aaKnown RBP16.03■□□□□ 0.16
CUX2-201ENST00000261726 ERCC3P19447 782 aa16.03■□□□□ 0.16
CUX2-201ENST00000261726 FBLN1P23142 703 aa16.03■□□□□ 0.16
CUX2-201ENST00000261726 LUC7L2Q9Y383 392 aaKnown RBP16.03■□□□□ 0.16
CUX2-201ENST00000261726 CCDC122Q5T0U0 273 aa16.03■□□□□ 0.16
CUX2-201ENST00000261726 TACC3Q9Y6A5 838 aa16.03■□□□□ 0.16
CUX2-201ENST00000261726 STX10O60499 249 aa16.02■□□□□ 0.16
CUX2-201ENST00000261726 EPB41P11171 864 aaKnown RBP16.02■□□□□ 0.16
CUX2-201ENST00000261726 CEP120Q8N960 986 aa16.02■□□□□ 0.16
CUX2-201ENST00000261726 DNMT1P26358 1616 aaKnown RBP16.02■□□□□ 0.16
CUX2-201ENST00000261726 CCDC169A6NNP5 214 aa16.02■□□□□ 0.16
CUX2-201ENST00000261726 GKAP1Q5VSY0 366 aaPredicted RBP16.02■□□□□ 0.16
CUX2-201ENST00000261726 VWA3AA6NCI4 1184 aa16.02■□□□□ 0.15
CUX2-201ENST00000261726 IGSF3O75054 1194 aa16.02■□□□□ 0.15
CUX2-201ENST00000261726 PDE1AP54750 535 aa16.02■□□□□ 0.15
CUX2-201ENST00000261726 MIPOL1Q8TD10 442 aa16.02■□□□□ 0.15
CUX2-201ENST00000261726 ASXL2Q76L83 1435 aa16.02■□□□□ 0.15
CUX2-201ENST00000261726 RAB3GAP1Q15042 981 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms