RNA–Protein interactions for RNA: ENST00000261318.4

C12orf49-201, Transcript of chromosome 12 open reading frame 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf49, Length 8,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-201ENST00000261318 CTNND2Q9UQB3 1225 aa16.78■□□□□ 0.28
C12orf49-201ENST00000261318 MAGEB6P1A0A0J9YX57 407 aa16.78■□□□□ 0.28
C12orf49-201ENST00000261318 ATP5DP30049 168 aa16.78■□□□□ 0.28
C12orf49-201ENST00000261318 ATP11AP98196 1134 aa16.78■□□□□ 0.28
C12orf49-201ENST00000261318 ATP6V0A2Q9Y487 856 aa16.78■□□□□ 0.28
C12orf49-201ENST00000261318 ZFYVE9O95405 1425 aa16.78■□□□□ 0.28
C12orf49-201ENST00000261318 FANCAO15360 1455 aa16.77■□□□□ 0.28
C12orf49-201ENST00000261318 IFT74Q96LB3 600 aa16.77■□□□□ 0.28
C12orf49-201ENST00000261318 MTUS1Q9ULD2 1270 aa16.77■□□□□ 0.28
C12orf49-201ENST00000261318 WDR78Q5VTH9 848 aa16.77■□□□□ 0.28
C12orf49-201ENST00000261318 GRIN2AQ12879 1464 aa16.77■□□□□ 0.28
C12orf49-201ENST00000261318 ATP2A2P16615 1042 aaKnown RBP16.77■□□□□ 0.28
C12orf49-201ENST00000261318 GOLGA6CA6NDK9 693 aa16.77■□□□□ 0.28
C12orf49-201ENST00000261318 GOLGA6DP0CG33 693 aa16.77■□□□□ 0.28
C12orf49-201ENST00000261318 DDX23Q9BUQ8 820 aaKnown RBP16.77■□□□□ 0.28
C12orf49-201ENST00000261318 GOLGA6AQ9NYA3 693 aa16.77■□□□□ 0.28
C12orf49-201ENST00000261318 MAP3K9P80192 1104 aa16.77■□□□□ 0.27
C12orf49-201ENST00000261318 POTEDQ86YR6 584 aa16.77■□□□□ 0.27
C12orf49-201ENST00000261318 RRP36Q96EU6 259 aaKnown RBP16.77■□□□□ 0.27
C12orf49-201ENST00000261318 SEC62Q99442 399 aaKnown RBP16.77■□□□□ 0.27
C12orf49-201ENST00000261318 PSMD1Q99460 953 aa16.77■□□□□ 0.27
C12orf49-201ENST00000261318 LLPHQ9BRT6 129 aaKnown RBP16.77■□□□□ 0.27
C12orf49-201ENST00000261318 PUS7Q96PZ0 661 aaKnown RBP16.77■□□□□ 0.27
C12orf49-201ENST00000261318 HPDP32754 393 aaPredicted RBP16.76■□□□□ 0.27
C12orf49-201ENST00000261318 GJC1P36383 396 aa16.76■□□□□ 0.27
C12orf49-201ENST00000261318 PLCB3Q01970 1234 aa16.76■□□□□ 0.27
C12orf49-201ENST00000261318 CALCOCO2Q13137 446 aa16.76■□□□□ 0.27
C12orf49-201ENST00000261318 NAP1L3Q99457 506 aaPredicted RBP16.76■□□□□ 0.27
C12orf49-201ENST00000261318 IMPG2Q9BZV3 1241 aa16.76■□□□□ 0.27
C12orf49-201ENST00000261318 GPATCH8Q9UKJ3 1502 aaKnown RBP16.76■□□□□ 0.27
C12orf49-201ENST00000261318 SBNO2Q9Y2G9 1366 aa16.76■□□□□ 0.27
C12orf49-201ENST00000261318 NDUFAB1O14561 156 aa16.76■□□□□ 0.27
C12orf49-201ENST00000261318 EXOC5O00471 708 aa16.76■□□□□ 0.27
C12orf49-201ENST00000261318 APBB1IPQ7Z5R6 666 aaPredicted RBP16.76■□□□□ 0.27
C12orf49-201ENST00000261318 CLSTN2Q9H4D0 955 aa16.76■□□□□ 0.27
C12orf49-201ENST00000261318 RBM28Q9NW13 759 aaKnown RBP16.76■□□□□ 0.27
C12orf49-201ENST00000261318 A0A1B0GUA9 196 aa16.76■□□□□ 0.27
C12orf49-201ENST00000261318 CBX8Q9HC52 389 aa16.76■□□□□ 0.27
C12orf49-201ENST00000261318 ZRANB1Q9UGI0 708 aa16.76■□□□□ 0.27
C12orf49-201ENST00000261318 WDHD1O75717 1129 aaPredicted RBP16.76■□□□□ 0.27
C12orf49-201ENST00000261318 INTS8Q75QN2 995 aaKnown RBP16.76■□□□□ 0.27
C12orf49-201ENST00000261318 LINS1Q8NG48 757 aa16.76■□□□□ 0.27
C12orf49-201ENST00000261318 PABPN1LA6NDY0 278 aaKnown RBP16.76■□□□□ 0.27
C12orf49-201ENST00000261318 FAM13AO94988 1023 aa16.76■□□□□ 0.27
C12orf49-201ENST00000261318 GNA11P29992 359 aa16.76■□□□□ 0.27
C12orf49-201ENST00000261318 TSPYL6Q8N831 410 aa16.76■□□□□ 0.27
C12orf49-201ENST00000261318 C8orf74Q6P047 294 aa16.75■□□□□ 0.27
C12orf49-201ENST00000261318 HS2ST1Q7LGA3 356 aa16.75■□□□□ 0.27
C12orf49-201ENST00000261318 TRIM7Q9C029 511 aa16.75■□□□□ 0.27
C12orf49-201ENST00000261318 VWA3AA6NCI4 1184 aa16.75■□□□□ 0.27
C12orf49-201ENST00000261318 FBXO31Q5XUX0 539 aaPredicted RBP16.75■□□□□ 0.27
C12orf49-201ENST00000261318 MAGEB6Q8N7X4 407 aa16.75■□□□□ 0.27
C12orf49-201ENST00000261318 ABCC1P33527 1531 aa16.75■□□□□ 0.27
C12orf49-201ENST00000261318 PPP1R2P41236 205 aa16.75■□□□□ 0.27
C12orf49-201ENST00000261318 VIMP08670 466 aaKnown RBP16.75■□□□□ 0.27
C12orf49-201ENST00000261318 MAP7D1Q3KQU3 841 aa16.75■□□□□ 0.27
C12orf49-201ENST00000261318 AKAP4Q5JQC9 854 aa16.75■□□□□ 0.27
C12orf49-201ENST00000261318 NKIRAS1Q9NYS0 192 aa16.75■□□□□ 0.27
C12orf49-201ENST00000261318 SPDYE3A6NKU9 549 aa16.75■□□□□ 0.27
C12orf49-201ENST00000261318 RXRAP19793 462 aa16.75■□□□□ 0.27
C12orf49-201ENST00000261318 INPP5BP32019 993 aa16.75■□□□□ 0.27
C12orf49-201ENST00000261318 STMN2Q93045 179 aa16.75■□□□□ 0.27
C12orf49-201ENST00000261318 CARD6Q9BX69 1037 aa16.75■□□□□ 0.27
C12orf49-201ENST00000261318 SYNRGQ9UMZ2 1314 aa16.74■□□□□ 0.27
C12orf49-201ENST00000261318 SEL1L2Q5TEA6 688 aa16.74■□□□□ 0.27
C12orf49-201ENST00000261318 ANAPC4Q9UJX5 808 aa16.74■□□□□ 0.27
C12orf49-201ENST00000261318 SSX2IPQ9Y2D8 614 aa16.74■□□□□ 0.27
C12orf49-201ENST00000261318 FANCCQ00597 558 aa16.74■□□□□ 0.27
C12orf49-201ENST00000261318 EIF4A2Q14240 407 aaKnown RBP16.74■□□□□ 0.27
C12orf49-201ENST00000261318 KRT28Q7Z3Y7 464 aa16.74■□□□□ 0.27
C12orf49-201ENST00000261318 UTP11Q9Y3A2 253 aaKnown RBP16.74■□□□□ 0.27
C12orf49-201ENST00000261318 ARHGEF12Q9NZN5 1544 aa16.74■□□□□ 0.27
C12orf49-201ENST00000261318 KDM2BQ8NHM5 1336 aa16.74■□□□□ 0.27
C12orf49-201ENST00000261318 HELLSQ9NRZ9 838 aa16.74■□□□□ 0.27
C12orf49-201ENST00000261318 ZBTB7BO15156 539 aaPredicted RBP16.74■□□□□ 0.27
C12orf49-201ENST00000261318 IFT20Q8IY31 132 aa16.74■□□□□ 0.27
C12orf49-201ENST00000261318 TFCP2Q12800 502 aa16.74■□□□□ 0.27
C12orf49-201ENST00000261318 C17orf53Q8N3J3 647 aaPredicted RBP16.74■□□□□ 0.27
C12orf49-201ENST00000261318 NOC4LQ9BVI4 516 aaKnown RBP16.74■□□□□ 0.27
C12orf49-201ENST00000261318 ALDH3A1P30838 453 aa16.74■□□□□ 0.27
C12orf49-201ENST00000261318 RAB3IL1Q8TBN0 382 aa16.74■□□□□ 0.27
C12orf49-201ENST00000261318 CPA1P15085 419 aa16.73■□□□□ 0.27
C12orf49-201ENST00000261318 BICC1Q9H694 974 aaKnown RBP16.73■□□□□ 0.27
C12orf49-201ENST00000261318 TXNDC16Q9P2K2 825 aa16.73■□□□□ 0.27
C12orf49-201ENST00000261318 IQSEC3Q9UPP2 1182 aaPredicted RBP16.73■□□□□ 0.27
C12orf49-201ENST00000261318 RILPL1Q5EBL4 403 aa16.73■□□□□ 0.27
C12orf49-201ENST00000261318 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.73■□□□□ 0.27
C12orf49-201ENST00000261318 PSMC4P43686 418 aa16.73■□□□□ 0.27
C12orf49-201ENST00000261318 ANO1Q5XXA6 986 aa16.73■□□□□ 0.27
C12orf49-201ENST00000261318 MPHOSPH6Q99547 160 aaKnown RBP16.73■□□□□ 0.27
C12orf49-201ENST00000261318 KCNH3Q9ULD8 1083 aa16.73■□□□□ 0.27
C12orf49-201ENST00000261318 DCAF17Q5H9S7 520 aaPredicted RBP16.73■□□□□ 0.27
C12orf49-201ENST00000261318 PPFIBP2Q8ND30 876 aa16.72■□□□□ 0.27
C12orf49-201ENST00000261318 SMARCC2Q8TAQ2 1214 aa16.72■□□□□ 0.27
C12orf49-201ENST00000261318 KDM5AP29375 1690 aaKnown RBP16.72■□□□□ 0.27
C12orf49-201ENST00000261318 SLC27A2O14975 620 aa16.72■□□□□ 0.27
C12orf49-201ENST00000261318 CEP128Q6ZU80 1094 aa16.72■□□□□ 0.27
C12orf49-201ENST00000261318 GPR161Q8N6U8 529 aaKnown RBP16.72■□□□□ 0.27
C12orf49-201ENST00000261318 VPS16Q9H269 839 aa16.72■□□□□ 0.27
C12orf49-201ENST00000261318 NOL3O60936 208 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms