RNA–Protein interactions for RNA: ENST00000260649.10

SLC3A1-201, Transcript of solute carrier family 3 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC3A1, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-201ENST00000260649 SPATA5Q8NB90 893 aa13.26□□□□□ -0.29
SLC3A1-201ENST00000260649 ZKSCAN3Q9BRR0 538 aa13.26□□□□□ -0.29
SLC3A1-201ENST00000260649 TRIM5Q9C035 493 aa13.26□□□□□ -0.29
SLC3A1-201ENST00000260649 SALL1Q9NSC2 1324 aa13.25□□□□□ -0.29
SLC3A1-201ENST00000260649 LOC102724428A0A0B4J2F2 783 aa13.25□□□□□ -0.29
SLC3A1-201ENST00000260649 SIK1P57059 783 aa13.25□□□□□ -0.29
SLC3A1-201ENST00000260649 ZSCAN25Q6NSZ9 544 aa13.25□□□□□ -0.29
SLC3A1-201ENST00000260649 MARCH10Q8NA82 808 aaPredicted RBP13.25□□□□□ -0.29
SLC3A1-201ENST00000260649 LPIN2Q92539 896 aa13.25□□□□□ -0.29
SLC3A1-201ENST00000260649 ZNF396Q96N95 335 aaPredicted RBP13.25□□□□□ -0.29
SLC3A1-201ENST00000260649 UTP14AQ9BVJ6 771 aaKnown RBP13.25□□□□□ -0.29
SLC3A1-201ENST00000260649 MYO5AQ9Y4I1 1855 aaKnown RBP13.25□□□□□ -0.29
SLC3A1-201ENST00000260649 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.25□□□□□ -0.29
SLC3A1-201ENST00000260649 NWD2Q9ULI1 1742 aa13.25□□□□□ -0.29
SLC3A1-201ENST00000260649 EIF5P55010 431 aaKnown RBP13.25□□□□□ -0.29
SLC3A1-201ENST00000260649 STK38Q15208 465 aa13.25□□□□□ -0.29
SLC3A1-201ENST00000260649 CCDC24Q8N4L8 307 aa13.25□□□□□ -0.29
SLC3A1-201ENST00000260649 NRBP1Q9UHY1 535 aa13.25□□□□□ -0.29
SLC3A1-201ENST00000260649 RCOR1Q9UKL0 485 aa13.25□□□□□ -0.29
SLC3A1-201ENST00000260649 NEDD4P46934 1319 aa13.25□□□□□ -0.29
SLC3A1-201ENST00000260649 DISP2A7MBM2 1401 aa13.24□□□□□ -0.29
SLC3A1-201ENST00000260649 KIF28PB7ZC32 967 aa13.24□□□□□ -0.29
SLC3A1-201ENST00000260649 SLC5A1P13866 664 aa13.24□□□□□ -0.29
SLC3A1-201ENST00000260649 PTGS1P23219 599 aa13.24□□□□□ -0.29
SLC3A1-201ENST00000260649 TTF1Q15361 905 aaPredicted RBP13.24□□□□□ -0.29
SLC3A1-201ENST00000260649 C11orf57Q6ZUT1 292 aaPredicted RBP13.24□□□□□ -0.29
SLC3A1-201ENST00000260649 ERVV-1B6SEH8 477 aa13.24□□□□□ -0.29
SLC3A1-201ENST00000260649 ABCF2Q9UG63 623 aa13.24□□□□□ -0.29
SLC3A1-201ENST00000260649 PYCARDQ9ULZ3 195 aa13.24□□□□□ -0.29
SLC3A1-201ENST00000260649 PCDHA7Q9UN72 937 aa13.24□□□□□ -0.29
SLC3A1-201ENST00000260649 KINO60870 393 aaKnown RBP13.23□□□□□ -0.29
SLC3A1-201ENST00000260649 METAP2P50579 478 aaKnown RBP eCLIP13.23□□□□□ -0.29
SLC3A1-201ENST00000260649 ARID3AQ99856 593 aa13.23□□□□□ -0.29
SLC3A1-201ENST00000260649 NAPBQ9H115 298 aa13.23□□□□□ -0.29
SLC3A1-201ENST00000260649 UQCRHLA0A096LP55 91 aa13.23□□□□□ -0.29
SLC3A1-201ENST00000260649 UQCRHP07919 91 aa13.23□□□□□ -0.29
SLC3A1-201ENST00000260649 MARCKSP29966 332 aaPredicted RBP13.23□□□□□ -0.29
SLC3A1-201ENST00000260649 CDC27P30260 824 aa13.23□□□□□ -0.29
SLC3A1-201ENST00000260649 NOLC1Q14978 699 aaKnown RBP eCLIP13.23□□□□□ -0.29
SLC3A1-201ENST00000260649 STRBPQ96SI9 672 aaKnown RBP13.23□□□□□ -0.29
SLC3A1-201ENST00000260649 KCNF1Q9H3M0 494 aa13.23□□□□□ -0.29
SLC3A1-201ENST00000260649 NUP98P52948 1817 aa13.23□□□□□ -0.29
SLC3A1-201ENST00000260649 UQCRFS1P1P0C7P4 283 aa13.23□□□□□ -0.29
SLC3A1-201ENST00000260649 GNL2Q13823 731 aaKnown RBP13.23□□□□□ -0.29
SLC3A1-201ENST00000260649 CMTR1Q8N1G2 835 aaKnown RBP13.23□□□□□ -0.29
SLC3A1-201ENST00000260649 SDF4Q9BRK5 362 aa13.23□□□□□ -0.29
SLC3A1-201ENST00000260649 EPB41L4AQ9HCS5 686 aaPredicted RBP13.23□□□□□ -0.29
SLC3A1-201ENST00000260649 LRP2BPQ9P2M1 347 aa13.23□□□□□ -0.29
SLC3A1-201ENST00000260649 ANGEL1Q9UNK9 670 aaKnown RBP13.23□□□□□ -0.29
SLC3A1-201ENST00000260649 SLIT2O94813 1529 aa13.23□□□□□ -0.29
SLC3A1-201ENST00000260649 NHSL1Q5SYE7 1610 aa13.23□□□□□ -0.29
SLC3A1-201ENST00000260649 LRP6O75581 1613 aa13.22□□□□□ -0.29
SLC3A1-201ENST00000260649 MROH5Q6ZUA9 1318 aa13.22□□□□□ -0.29
SLC3A1-201ENST00000260649 SMIM22K7EJ46 135 aa13.22□□□□□ -0.29
SLC3A1-201ENST00000260649 DHX16O60231 1041 aaKnown RBP13.22□□□□□ -0.29
SLC3A1-201ENST00000260649 ARID4AP29374 1257 aaPredicted RBP13.22□□□□□ -0.29
SLC3A1-201ENST00000260649 IGHMBP2P38935 993 aaKnown RBP13.22□□□□□ -0.29
SLC3A1-201ENST00000260649 MAP3K12Q12852 859 aa13.22□□□□□ -0.29
SLC3A1-201ENST00000260649 ISM2Q6H9L7 571 aa13.22□□□□□ -0.29
SLC3A1-201ENST00000260649 CCDC186Q7Z3E2 898 aa13.22□□□□□ -0.29
SLC3A1-201ENST00000260649 TCRBV5S4A2TA0A5A2 114 aa13.22□□□□□ -0.29
SLC3A1-201ENST00000260649 BIN1O00499 593 aa13.22□□□□□ -0.29
SLC3A1-201ENST00000260649 CAMTA2O94983 1202 aa13.22□□□□□ -0.29
SLC3A1-201ENST00000260649 FGFR2P21802 821 aa13.22□□□□□ -0.29
SLC3A1-201ENST00000260649 TDO2P48775 406 aa13.22□□□□□ -0.29
SLC3A1-201ENST00000260649 LRMPQ12912 555 aa13.22□□□□□ -0.29
SLC3A1-201ENST00000260649 SNW1Q13573 536 aaKnown RBP13.22□□□□□ -0.29
SLC3A1-201ENST00000260649 UBE3CQ15386 1083 aa13.22□□□□□ -0.29
SLC3A1-201ENST00000260649 TMEM67Q5HYA8 995 aa13.22□□□□□ -0.29
SLC3A1-201ENST00000260649 SYNE3Q6ZMZ3 975 aa13.22□□□□□ -0.29
SLC3A1-201ENST00000260649 IFNL3Q8IZI9 196 aa13.22□□□□□ -0.29
SLC3A1-201ENST00000260649 LCORLQ8N3X6 602 aa13.22□□□□□ -0.29
SLC3A1-201ENST00000260649 FBXO18Q8NFZ0 1043 aa13.22□□□□□ -0.29
SLC3A1-201ENST00000260649 ALG1Q9BT22 464 aa13.22□□□□□ -0.29
SLC3A1-201ENST00000260649 TACC3Q9Y6A5 838 aa13.22□□□□□ -0.29
SLC3A1-201ENST00000260649 AKAP11Q9UKA4 1901 aa13.21□□□□□ -0.29
SLC3A1-201ENST00000260649 NDUFA8P51970 172 aa13.21□□□□□ -0.29
SLC3A1-201ENST00000260649 FAM13BQ9NYF5 915 aa13.21□□□□□ -0.29
SLC3A1-201ENST00000260649 SPATA31A1Q5TZJ5 1347 aa13.21□□□□□ -0.29
SLC3A1-201ENST00000260649 IFIT3O14879 490 aaKnown RBP13.21□□□□□ -0.29
SLC3A1-201ENST00000260649 GYG1P46976 350 aa13.21□□□□□ -0.29
SLC3A1-201ENST00000260649 CHRNDQ07001 517 aa13.21□□□□□ -0.29
SLC3A1-201ENST00000260649 CCDC152Q4G0S7 254 aa13.21□□□□□ -0.29
SLC3A1-201ENST00000260649 FAM182BQ5T319 152 aa13.21□□□□□ -0.29
SLC3A1-201ENST00000260649 C3orf67Q6ZVT6 689 aa13.21□□□□□ -0.29
SLC3A1-201ENST00000260649 TSC1Q92574 1164 aa13.21□□□□□ -0.29
SLC3A1-201ENST00000260649 SLC4A4Q9Y6R1 1079 aa13.21□□□□□ -0.29
SLC3A1-201ENST00000260649 GOLGA6L19H0YKK7 550 aa13.2□□□□□ -0.3
SLC3A1-201ENST00000260649 SH2B2O14492 632 aaPredicted RBP13.2□□□□□ -0.3
SLC3A1-201ENST00000260649 TPM2P07951 284 aa13.2□□□□□ -0.3
SLC3A1-201ENST00000260649 GTF2E1P29083 439 aaPredicted RBP13.2□□□□□ -0.3
SLC3A1-201ENST00000260649 APOA5Q6Q788 366 aa13.2□□□□□ -0.3
SLC3A1-201ENST00000260649 PIBF1Q8WXW3 757 aa13.2□□□□□ -0.3
SLC3A1-201ENST00000260649 ZSWIM5Q9P217 1185 aa13.2□□□□□ -0.3
SLC3A1-201ENST00000260649 GOLGA8AA7E2F4 631 aa13.2□□□□□ -0.3
SLC3A1-201ENST00000260649 MINDY4BA8MYZ0 360 aa13.2□□□□□ -0.3
SLC3A1-201ENST00000260649 EVCP57679 992 aa13.2□□□□□ -0.3
SLC3A1-201ENST00000260649 FAM160A1Q05DH4 1040 aa13.2□□□□□ -0.3
SLC3A1-201ENST00000260649 FAM98CQ17RN3 349 aaKnown RBP13.2□□□□□ -0.3
SLC3A1-201ENST00000260649 MYSM1Q5VVJ2 828 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms