RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 CEP57L1Q8IYX8 460 aa18.29■□□□□ 0.52
RFX1-201ENST00000254325 ALS2Q96Q42 1657 aa18.28■□□□□ 0.52
RFX1-201ENST00000254325 WTAPQ15007 396 aa18.28■□□□□ 0.52
RFX1-201ENST00000254325 DNAJC25Q9H1X3 360 aa18.28■□□□□ 0.52
RFX1-201ENST00000254325 MTMR7Q9Y216 660 aa18.28■□□□□ 0.52
RFX1-201ENST00000254325 A0A0G2JLW4 131 aa18.28■□□□□ 0.52
RFX1-201ENST00000254325 SLC3A2P08195 630 aaKnown RBP18.28■□□□□ 0.52
RFX1-201ENST00000254325 CTDSPL2Q05D32 466 aa18.28■□□□□ 0.52
RFX1-201ENST00000254325 ZKSCAN3Q9BRR0 538 aa18.28■□□□□ 0.52
RFX1-201ENST00000254325 CCDC24Q8N4L8 307 aa18.27■□□□□ 0.52
RFX1-201ENST00000254325 GNPATO15228 680 aa18.27■□□□□ 0.52
RFX1-201ENST00000254325 GNAT2P19087 354 aa18.27■□□□□ 0.52
RFX1-201ENST00000254325 ANKIB1Q9P2G1 1089 aa18.27■□□□□ 0.52
RFX1-201ENST00000254325 THRAP3Q9Y2W1 955 aaKnown RBP18.27■□□□□ 0.52
RFX1-201ENST00000254325 CCDC196A0A1B0GTZ2 297 aa18.27■□□□□ 0.51
RFX1-201ENST00000254325 LUZP1Q86V48 1076 aa18.27■□□□□ 0.51
RFX1-201ENST00000254325 MRPS27Q92552 414 aaKnown RBP18.27■□□□□ 0.51
RFX1-201ENST00000254325 MYL10Q9BUA6 226 aa18.27■□□□□ 0.51
RFX1-201ENST00000254325 ANO10Q9NW15 660 aa18.27■□□□□ 0.51
RFX1-201ENST00000254325 PODXL2Q9NZ53 605 aa18.27■□□□□ 0.51
RFX1-201ENST00000254325 MAGEB6P1A0A0J9YX57 407 aa18.26■□□□□ 0.51
RFX1-201ENST00000254325 CHRNDQ07001 517 aa18.26■□□□□ 0.51
RFX1-201ENST00000254325 COL9A3Q14050 684 aaPredicted RBP18.26■□□□□ 0.51
RFX1-201ENST00000254325 CLSTN2Q9H4D0 955 aa18.26■□□□□ 0.51
RFX1-201ENST00000254325 ELP1O95163 1332 aa18.26■□□□□ 0.51
RFX1-201ENST00000254325 ST3GAL1Q11201 340 aa18.26■□□□□ 0.51
RFX1-201ENST00000254325 USP28Q96RU2 1077 aa18.26■□□□□ 0.51
RFX1-201ENST00000254325 NOL7Q9UMY1 257 aaKnown RBP18.26■□□□□ 0.51
RFX1-201ENST00000254325 HOOK1Q9UJC3 728 aaKnown RBP18.26■□□□□ 0.51
RFX1-201ENST00000254325 KCNG4Q8TDN1 519 aa18.25■□□□□ 0.51
RFX1-201ENST00000254325 TMEM87BQ96K49 555 aa18.25■□□□□ 0.51
RFX1-201ENST00000254325 TTC12Q9H892 705 aaPredicted RBP18.25■□□□□ 0.51
RFX1-201ENST00000254325 SCN11AQ9UI33 1791 aa18.25■□□□□ 0.51
RFX1-201ENST00000254325 NR1I2O75469 434 aa18.25■□□□□ 0.51
RFX1-201ENST00000254325 RFC4P35249 363 aa18.25■□□□□ 0.51
RFX1-201ENST00000254325 RESTQ13127 1097 aa18.25■□□□□ 0.51
RFX1-201ENST00000254325 AK7Q96M32 723 aa18.25■□□□□ 0.51
RFX1-201ENST00000254325 PATL2C9JE40 543 aaKnown RBP18.25■□□□□ 0.51
RFX1-201ENST00000254325 STX1AQ16623 288 aa18.25■□□□□ 0.51
RFX1-201ENST00000254325 ATL3Q6DD88 541 aa18.25■□□□□ 0.51
RFX1-201ENST00000254325 BRMS1Q9HCU9 246 aa18.25■□□□□ 0.51
RFX1-201ENST00000254325 SPTLC2O15270 562 aa18.25■□□□□ 0.51
RFX1-201ENST00000254325 MARCKSP29966 332 aaPredicted RBP18.25■□□□□ 0.51
RFX1-201ENST00000254325 DZIP1Q86YF9 867 aaKnown RBP18.25■□□□□ 0.51
RFX1-201ENST00000254325 IFNL3Q8IZI9 196 aa18.25■□□□□ 0.51
RFX1-201ENST00000254325 RTCBQ9Y3I0 505 aaKnown RBP18.25■□□□□ 0.51
RFX1-201ENST00000254325 G3V3G9 751 aa18.24■□□□□ 0.51
RFX1-201ENST00000254325 KCNQ2O43526 872 aa18.24■□□□□ 0.51
RFX1-201ENST00000254325 GYG1P46976 350 aa18.24■□□□□ 0.51
RFX1-201ENST00000254325 EIF5P55010 431 aaKnown RBP18.24■□□□□ 0.51
RFX1-201ENST00000254325 RASGRF1Q13972 1273 aa18.24■□□□□ 0.51
RFX1-201ENST00000254325 RTN1Q16799 776 aa18.24■□□□□ 0.51
RFX1-201ENST00000254325 DCAF8Q5TAQ9 597 aa18.24■□□□□ 0.51
RFX1-201ENST00000254325 TPTE2Q6XPS3 522 aa18.24■□□□□ 0.51
RFX1-201ENST00000254325 IQCA1Q86XH1 822 aa18.24■□□□□ 0.51
RFX1-201ENST00000254325 PHKBQ93100 1093 aa18.24■□□□□ 0.51
RFX1-201ENST00000254325 NYXQ9GZU5 481 aa18.24■□□□□ 0.51
RFX1-201ENST00000254325 ADD1P35611 737 aaKnown RBP18.24■□□□□ 0.51
RFX1-201ENST00000254325 ZNF34Q8IZ26 560 aa18.24■□□□□ 0.51
RFX1-201ENST00000254325 FTOQ9C0B1 505 aaKnown RBP eCLIP18.24■□□□□ 0.51
RFX1-201ENST00000254325 BRAPQ7Z569 592 aa18.24■□□□□ 0.51
RFX1-201ENST00000254325 RASSF8Q8NHQ8 419 aa18.24■□□□□ 0.51
RFX1-201ENST00000254325 PIBF1Q8WXW3 757 aa18.24■□□□□ 0.51
RFX1-201ENST00000254325 MRC1P22897 1456 aa18.24■□□□□ 0.51
RFX1-201ENST00000254325 BIN1O00499 593 aa18.23■□□□□ 0.51
RFX1-201ENST00000254325 MARCH10Q8NA82 808 aaPredicted RBP18.23■□□□□ 0.51
RFX1-201ENST00000254325 SLC4A9Q96Q91 983 aa18.23■□□□□ 0.51
RFX1-201ENST00000254325 TMX4Q9H1E5 349 aaPredicted RBP18.23■□□□□ 0.51
RFX1-201ENST00000254325 SMC2O95347 1197 aa18.23■□□□□ 0.51
RFX1-201ENST00000254325 EXOSC10Q01780 885 aaKnown RBP18.23■□□□□ 0.51
RFX1-201ENST00000254325 ESR2Q92731 530 aa18.23■□□□□ 0.51
RFX1-201ENST00000254325 CCNL1Q9UK58 526 aaPredicted RBP18.23■□□□□ 0.51
RFX1-201ENST00000254325 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.23■□□□□ 0.51
RFX1-201ENST00000254325 A0A1B0GVL5 298 aa18.23■□□□□ 0.51
RFX1-201ENST00000254325 JAG2Q9Y219 1238 aa18.23■□□□□ 0.51
RFX1-201ENST00000254325 ABCC6O95255 1503 aa18.23■□□□□ 0.51
RFX1-201ENST00000254325 CARMIL3Q8ND23 1372 aa18.22■□□□□ 0.51
RFX1-201ENST00000254325 SPATA31A1Q5TZJ5 1347 aa18.22■□□□□ 0.51
RFX1-201ENST00000254325 SLC4A8Q2Y0W8 1093 aa18.22■□□□□ 0.51
RFX1-201ENST00000254325 OLFM4Q6UX06 510 aa18.22■□□□□ 0.51
RFX1-201ENST00000254325 UBN2Q6ZU65 1347 aa18.22■□□□□ 0.51
RFX1-201ENST00000254325 BCL9O00512 1426 aa18.22■□□□□ 0.51
RFX1-201ENST00000254325 TPM2P07951 284 aa18.22■□□□□ 0.51
RFX1-201ENST00000254325 FAM160A1Q05DH4 1040 aa18.22■□□□□ 0.51
RFX1-201ENST00000254325 ERFEQ4G0M1 354 aa18.22■□□□□ 0.51
RFX1-201ENST00000254325 AKNAD1Q5T1N1 836 aa18.22■□□□□ 0.51
RFX1-201ENST00000254325 FILIP1Q7Z7B0 1213 aa18.22■□□□□ 0.51
RFX1-201ENST00000254325 ARID3AQ99856 593 aa18.22■□□□□ 0.51
RFX1-201ENST00000254325 AFDNP55196 1824 aaKnown RBP18.21■□□□□ 0.51
RFX1-201ENST00000254325 TMTC2Q8N394 836 aa18.21■□□□□ 0.51
RFX1-201ENST00000254325 CAVIN2O95810 425 aa18.21■□□□□ 0.51
RFX1-201ENST00000254325 CATIPQ7Z7H3 387 aa18.21■□□□□ 0.51
RFX1-201ENST00000254325 SMARCC2Q8TAQ2 1214 aa18.2■□□□□ 0.5
RFX1-201ENST00000254325 FAM13BQ9NYF5 915 aa18.2■□□□□ 0.5
RFX1-201ENST00000254325 DENND2AQ9ULE3 1009 aa18.2■□□□□ 0.5
RFX1-201ENST00000254325 ABCC12Q96J65 1359 aa18.2■□□□□ 0.5
RFX1-201ENST00000254325 USP5P45974 858 aa18.2■□□□□ 0.5
RFX1-201ENST00000254325 FAM182BQ5T319 152 aa18.2■□□□□ 0.5
RFX1-201ENST00000254325 C5P01031 1676 aa18.2■□□□□ 0.5
RFX1-201ENST00000254325 PRKAB2O43741 272 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms