RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 C21orf2O43822 256 aa13.51□□□□□ -0.25
CLUHP3-201ENST00000254109 UBE4AQ14139 1066 aa13.51□□□□□ -0.25
CLUHP3-201ENST00000254109 ZMYM1Q5SVZ6 1142 aa13.51□□□□□ -0.25
CLUHP3-201ENST00000254109 TMC4Q7Z404 712 aa13.51□□□□□ -0.25
CLUHP3-201ENST00000254109 C7orf43Q8WVR3 580 aa13.51□□□□□ -0.25
CLUHP3-201ENST00000254109 ANP32BQ92688 251 aaKnown RBP13.51□□□□□ -0.25
CLUHP3-201ENST00000254109 DSCC1Q9BVC3 393 aa13.51□□□□□ -0.25
CLUHP3-201ENST00000254109 F13A1P00488 732 aa13.5□□□□□ -0.25
CLUHP3-201ENST00000254109 HMGB1P09429 215 aaKnown RBP13.5□□□□□ -0.25
CLUHP3-201ENST00000254109 PDCP20941 246 aa13.5□□□□□ -0.25
CLUHP3-201ENST00000254109 BCAMP50895 628 aa13.5□□□□□ -0.25
CLUHP3-201ENST00000254109 FKBP4Q02790 459 aaKnown RBP eCLIP13.5□□□□□ -0.25
CLUHP3-201ENST00000254109 CSPP1Q1MSJ5 1256 aa13.5□□□□□ -0.25
CLUHP3-201ENST00000254109 FOXD4L6Q3SYB3 417 aaPredicted RBP13.5□□□□□ -0.25
CLUHP3-201ENST00000254109 FOXD4L3Q6VB84 417 aaPredicted RBP13.5□□□□□ -0.25
CLUHP3-201ENST00000254109 TXNRD3Q86VQ6 643 aa13.5□□□□□ -0.25
CLUHP3-201ENST00000254109 FAM43AQ8N2R8 423 aa13.5□□□□□ -0.25
CLUHP3-201ENST00000254109 NECAB1Q8N987 351 aa13.5□□□□□ -0.25
CLUHP3-201ENST00000254109 FHDC1Q9C0D6 1143 aaPredicted RBP13.5□□□□□ -0.25
CLUHP3-201ENST00000254109 RTN4Q9NQC3 1192 aaKnown RBP13.5□□□□□ -0.25
CLUHP3-201ENST00000254109 PIM2Q9P1W9 311 aa13.5□□□□□ -0.25
CLUHP3-201ENST00000254109 POLLQ9UGP5 575 aa13.5□□□□□ -0.25
CLUHP3-201ENST00000254109 ARAP2Q8WZ64 1704 aa13.5□□□□□ -0.25
CLUHP3-201ENST00000254109 BRCA1P38398 1863 aaKnown RBP13.5□□□□□ -0.25
CLUHP3-201ENST00000254109 LTBP1Q14766 1721 aa13.5□□□□□ -0.25
CLUHP3-201ENST00000254109 UFL1O94874 794 aa13.5□□□□□ -0.25
CLUHP3-201ENST00000254109 PHKA1P46020 1223 aa13.5□□□□□ -0.25
CLUHP3-201ENST00000254109 GYG1P46976 350 aa13.5□□□□□ -0.25
CLUHP3-201ENST00000254109 MPNDQ8N594 471 aa13.5□□□□□ -0.25
CLUHP3-201ENST00000254109 TBC1D16Q8TBP0 767 aa13.5□□□□□ -0.25
CLUHP3-201ENST00000254109 GGA1Q9UJY5 639 aa13.5□□□□□ -0.25
CLUHP3-201ENST00000254109 CHGBP05060 677 aa13.49□□□□□ -0.25
CLUHP3-201ENST00000254109 ZFYP08048 801 aaPredicted RBP13.49□□□□□ -0.25
CLUHP3-201ENST00000254109 ATP2B4P23634 1241 aa13.49□□□□□ -0.25
CLUHP3-201ENST00000254109 NASPP49321 788 aaPredicted RBP13.49□□□□□ -0.25
CLUHP3-201ENST00000254109 TOB2Q14106 344 aaPredicted RBP13.49□□□□□ -0.25
CLUHP3-201ENST00000254109 CCDC102BQ68D86 513 aa13.49□□□□□ -0.25
CLUHP3-201ENST00000254109 USP48Q86UV5 1035 aa13.49□□□□□ -0.25
CLUHP3-201ENST00000254109 TMEM87AQ8NBN3 555 aa13.49□□□□□ -0.25
CLUHP3-201ENST00000254109 PODXL2Q9NZ53 605 aa13.49□□□□□ -0.25
CLUHP3-201ENST00000254109 RBM27Q9P2N5 1060 aaKnown RBP13.49□□□□□ -0.25
CLUHP3-201ENST00000254109 LEMD3Q9Y2U8 911 aa13.49□□□□□ -0.25
CLUHP3-201ENST00000254109 TAF6LQ9Y6J9 622 aa13.49□□□□□ -0.25
CLUHP3-201ENST00000254109 SRCAPQ6ZRS2 3230 aa13.49□□□□□ -0.25
CLUHP3-201ENST00000254109 IRS2Q9Y4H2 1338 aa13.49□□□□□ -0.25
CLUHP3-201ENST00000254109 C6orf229H3BNL8 230 aa13.48□□□□□ -0.25
CLUHP3-201ENST00000254109 CYP21A2P08686 494 aa13.48□□□□□ -0.25
CLUHP3-201ENST00000254109 FGD1P98174 961 aa13.48□□□□□ -0.25
CLUHP3-201ENST00000254109 SCARF1Q14162 830 aa13.48□□□□□ -0.25
CLUHP3-201ENST00000254109 DPP8Q6V1X1 898 aaPredicted RBP13.48□□□□□ -0.25
CLUHP3-201ENST00000254109 TCEANC2Q96MN5 208 aa13.48□□□□□ -0.25
CLUHP3-201ENST00000254109 TMX4Q9H1E5 349 aaPredicted RBP13.48□□□□□ -0.25
CLUHP3-201ENST00000254109 DUOX1Q9NRD9 1551 aa13.48□□□□□ -0.25
CLUHP3-201ENST00000254109 ST3GAL1Q11201 340 aa13.48□□□□□ -0.25
CLUHP3-201ENST00000254109 DALRD3Q5D0E6 543 aaKnown RBP13.48□□□□□ -0.25
CLUHP3-201ENST00000254109 LARP1BQ659C4 914 aaKnown RBP13.48□□□□□ -0.25
CLUHP3-201ENST00000254109 PI16Q6UXB8 463 aa13.48□□□□□ -0.25
CLUHP3-201ENST00000254109 FAM84BQ96KN1 310 aaPredicted RBP13.48□□□□□ -0.25
CLUHP3-201ENST00000254109 TMEM63CQ9P1W3 806 aa13.48□□□□□ -0.25
CLUHP3-201ENST00000254109 IQSEC3Q9UPP2 1182 aaPredicted RBP13.48□□□□□ -0.25
CLUHP3-201ENST00000254109 MTMR6Q9Y217 621 aa13.48□□□□□ -0.25
CLUHP3-201ENST00000254109 VPS37CA5D8V6 355 aaPredicted RBP13.47□□□□□ -0.25
CLUHP3-201ENST00000254109 HSPD1P10809 573 aaKnown RBP13.47□□□□□ -0.25
CLUHP3-201ENST00000254109 LRSAM1Q6UWE0 723 aa13.47□□□□□ -0.25
CLUHP3-201ENST00000254109 Q6ZUG5 572 aa13.47□□□□□ -0.25
CLUHP3-201ENST00000254109 GDPD2Q9HCC8 539 aa13.47□□□□□ -0.25
CLUHP3-201ENST00000254109 BCS1LQ9Y276 419 aa13.47□□□□□ -0.25
CLUHP3-201ENST00000254109 CNPY2Q9Y2B0 182 aa13.47□□□□□ -0.25
CLUHP3-201ENST00000254109 MAST3O60307 1309 aa13.47□□□□□ -0.25
CLUHP3-201ENST00000254109 RIMBP2O15034 1052 aa13.46□□□□□ -0.25
CLUHP3-201ENST00000254109 MCAMP43121 646 aa13.46□□□□□ -0.25
CLUHP3-201ENST00000254109 CAVIN4Q5BKX8 364 aa13.46□□□□□ -0.25
CLUHP3-201ENST00000254109 SYT17Q9BSW7 474 aa13.46□□□□□ -0.25
CLUHP3-201ENST00000254109 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.46□□□□□ -0.25
CLUHP3-201ENST00000254109 CTNNA3Q9UI47 895 aa13.46□□□□□ -0.25
CLUHP3-201ENST00000254109 AKAP11Q9UKA4 1901 aa13.46□□□□□ -0.25
CLUHP3-201ENST00000254109 SNED1Q8TER0 1413 aa13.46□□□□□ -0.26
CLUHP3-201ENST00000254109 SYCE3A1L190 88 aa13.46□□□□□ -0.26
CLUHP3-201ENST00000254109 UBE2HP62256 183 aa13.46□□□□□ -0.26
CLUHP3-201ENST00000254109 CCDC173Q0VFZ6 552 aa13.46□□□□□ -0.26
CLUHP3-201ENST00000254109 STK3Q13188 491 aa13.46□□□□□ -0.26
CLUHP3-201ENST00000254109 WASHC4Q2M389 1173 aa13.46□□□□□ -0.26
CLUHP3-201ENST00000254109 ZSCAN25Q6NSZ9 544 aa13.46□□□□□ -0.26
CLUHP3-201ENST00000254109 DHX32Q7L7V1 743 aaKnown RBP13.46□□□□□ -0.26
CLUHP3-201ENST00000254109 FBXO33Q7Z6M2 555 aa13.46□□□□□ -0.26
CLUHP3-201ENST00000254109 TRIM44Q96DX7 344 aaPredicted RBP13.46□□□□□ -0.26
CLUHP3-201ENST00000254109 M0R2C6 588 aa13.45□□□□□ -0.26
CLUHP3-201ENST00000254109 GADD45BO75293 160 aaPredicted RBP13.45□□□□□ -0.26
CLUHP3-201ENST00000254109 ARID4AP29374 1257 aaPredicted RBP13.45□□□□□ -0.26
CLUHP3-201ENST00000254109 HIBADHP31937 336 aaKnown RBP13.45□□□□□ -0.26
CLUHP3-201ENST00000254109 ZAP70P43403 619 aa13.45□□□□□ -0.26
CLUHP3-201ENST00000254109 RASGRF1Q13972 1273 aa13.45□□□□□ -0.26
CLUHP3-201ENST00000254109 COL9A3Q14050 684 aaPredicted RBP13.45□□□□□ -0.26
CLUHP3-201ENST00000254109 SLFNL1Q499Z3 407 aa13.45□□□□□ -0.26
CLUHP3-201ENST00000254109 CCDC93Q567U6 631 aa13.45□□□□□ -0.26
CLUHP3-201ENST00000254109 VPS37DQ86XT2 251 aa13.45□□□□□ -0.26
CLUHP3-201ENST00000254109 ZNF512BQ96KM6 892 aaPredicted RBP13.45□□□□□ -0.26
CLUHP3-201ENST00000254109 TTF1Q15361 905 aaPredicted RBP13.44□□□□□ -0.26
CLUHP3-201ENST00000254109 APPBP2Q92624 585 aa13.44□□□□□ -0.26
CLUHP3-201ENST00000254109 GTF3C6Q969F1 213 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms