RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 M0R2C6 588 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 LRRC24Q50LG9 513 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 JAKMIP3Q5VZ66 844 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 JAKMIP1Q96N16 626 aaKnown RBP4.83□□□□□ -1.64
UBE4A-201ENST00000252108 LLPHQ9BRT6 129 aaKnown RBP4.83□□□□□ -1.64
UBE4A-201ENST00000252108 RCOR1Q9UKL0 485 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 INTS5Q6P9B9 1019 aaKnown RBP4.83□□□□□ -1.64
UBE4A-201ENST00000252108 AACSQ86V21 672 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 OSBP2Q969R2 916 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 U3KPZ7 1027 aaPredicted RBP4.83□□□□□ -1.64
UBE4A-201ENST00000252108 SNED1Q8TER0 1413 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 ZSCAN12O43309 604 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 TUBBP07437 444 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 EIF2S2P20042 333 aaKnown RBP4.83□□□□□ -1.64
UBE4A-201ENST00000252108 GJB2P29033 226 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 TCIRG1Q13488 830 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 C1orf141Q5JVX7 400 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 PRPF40BQ6NWY9 871 aaKnown RBP4.83□□□□□ -1.64
UBE4A-201ENST00000252108 TRIM34Q9BYJ4 488 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 GBP3Q9H0R5 595 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 FAM53CQ9NYF3 392 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 EYA2O00167 538 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 HSPD1P10809 573 aaKnown RBP4.83□□□□□ -1.64
UBE4A-201ENST00000252108 TATP17735 454 aaPredicted RBP4.83□□□□□ -1.64
UBE4A-201ENST00000252108 CASTP20810 708 aaKnown RBP4.83□□□□□ -1.64
UBE4A-201ENST00000252108 GNL2Q13823 731 aaKnown RBP4.83□□□□□ -1.64
UBE4A-201ENST00000252108 SARM1Q6SZW1 724 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 ERO1AQ96HE7 468 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 IMPACTQ9P2X3 320 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 ADAMTSL1Q8N6G6 1762 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 GRM1Q13255 1194 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 NAA16Q6N069 864 aaPredicted RBP4.83□□□□□ -1.64
UBE4A-201ENST00000252108 OLFM4Q6UX06 510 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 TDRD7Q8NHU6 1098 aaKnown RBP4.83□□□□□ -1.64
UBE4A-201ENST00000252108 FBXW7Q969H0 707 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 MYD88Q99836 296 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 PUS3Q9BZE2 481 aaKnown RBP4.83□□□□□ -1.64
UBE4A-201ENST00000252108 CLIP2Q9UDT6 1046 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 HPSEQ9Y251 543 aa4.83□□□□□ -1.64
UBE4A-201ENST00000252108 EIF3JO75822 258 aaKnown RBP4.82□□□□□ -1.64
UBE4A-201ENST00000252108 RFX1P22670 979 aa4.82□□□□□ -1.64
UBE4A-201ENST00000252108 PIP4K2AP48426 406 aaPredicted RBP4.82□□□□□ -1.64
UBE4A-201ENST00000252108 ZC3H6P61129 1189 aaKnown RBP4.82□□□□□ -1.64
UBE4A-201ENST00000252108 ALX1Q15699 326 aa4.82□□□□□ -1.64
UBE4A-201ENST00000252108 AXDND1Q5T1B0 1012 aaPredicted RBP4.82□□□□□ -1.64
UBE4A-201ENST00000252108 GIGYF2Q6Y7W6 1299 aaKnown RBP4.82□□□□□ -1.64
UBE4A-201ENST00000252108 HOMER1Q86YM7 354 aa4.82□□□□□ -1.64
UBE4A-201ENST00000252108 SLAIN2Q9P270 581 aa4.82□□□□□ -1.64
UBE4A-201ENST00000252108 V9GYY5 206 aaPredicted RBP4.82□□□□□ -1.64
UBE4A-201ENST00000252108 ERLIN1O75477 346 aa4.82□□□□□ -1.64
UBE4A-201ENST00000252108 EIF5P55010 431 aaKnown RBP4.82□□□□□ -1.64
UBE4A-201ENST00000252108 CEP135Q66GS9 1140 aa4.82□□□□□ -1.64
UBE4A-201ENST00000252108 CCDC70Q6NSX1 233 aa4.82□□□□□ -1.64
UBE4A-201ENST00000252108 SYNE3Q6ZMZ3 975 aa4.82□□□□□ -1.64
UBE4A-201ENST00000252108 TTLL11Q8NHH1 800 aa4.82□□□□□ -1.64
UBE4A-201ENST00000252108 FSD1Q9BTV5 496 aa4.82□□□□□ -1.64
UBE4A-201ENST00000252108 CCDC8Q9H0W5 538 aaPredicted RBP4.82□□□□□ -1.64
UBE4A-201ENST00000252108 GOLPH3LQ9H4A5 285 aa4.82□□□□□ -1.64
UBE4A-201ENST00000252108 LOC285556D6RIA3 1793 aa4.82□□□□□ -1.64
UBE4A-201ENST00000252108 LIG1P18858 919 aa4.82□□□□□ -1.64
UBE4A-201ENST00000252108 ZNF592Q92610 1267 aa4.82□□□□□ -1.64
UBE4A-201ENST00000252108 ZNF274Q96GC6 653 aaPredicted RBP4.82□□□□□ -1.64
UBE4A-201ENST00000252108 ERVV-1B6SEH8 477 aa4.82□□□□□ -1.64
UBE4A-201ENST00000252108 CTIFO43310 598 aaKnown RBP4.82□□□□□ -1.64
UBE4A-201ENST00000252108 ZNF165P49910 485 aa4.82□□□□□ -1.64
UBE4A-201ENST00000252108 DNM1Q05193 864 aaKnown RBP4.82□□□□□ -1.64
UBE4A-201ENST00000252108 TYRO3Q06418 890 aa4.82□□□□□ -1.64
UBE4A-201ENST00000252108 TUBB2AQ13885 445 aa4.82□□□□□ -1.64
UBE4A-201ENST00000252108 CHRNA2Q15822 529 aa4.82□□□□□ -1.64
UBE4A-201ENST00000252108 NLRP10Q86W26 655 aa4.82□□□□□ -1.64
UBE4A-201ENST00000252108 ZBTB38Q8NAP3 1195 aaPredicted RBP4.82□□□□□ -1.64
UBE4A-201ENST00000252108 SDF4Q9BRK5 362 aa4.82□□□□□ -1.64
UBE4A-201ENST00000252108 TUBB2BQ9BVA1 445 aa4.82□□□□□ -1.64
UBE4A-201ENST00000252108 CTNNA3Q9UI47 895 aa4.82□□□□□ -1.64
UBE4A-201ENST00000252108 IL15P40933 162 aaPredicted RBP4.81□□□□□ -1.64
UBE4A-201ENST00000252108 FUT2Q10981 343 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 NPY5RQ15761 445 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 MCMDC2Q4G0Z9 681 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 TMCO3Q6UWJ1 677 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 ELOA2Q8IYF1 753 aaPredicted RBP4.81□□□□□ -1.64
UBE4A-201ENST00000252108 TXLNBQ8N3L3 684 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 ANKRD20A12PQ8NF67 263 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 ZCRB1Q8TBF4 217 aaKnown RBP4.81□□□□□ -1.64
UBE4A-201ENST00000252108 LEO1Q8WVC0 666 aaPredicted RBP4.81□□□□□ -1.64
UBE4A-201ENST00000252108 TIGD1Q96MW7 591 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 MAP3K14Q99558 947 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 PDS5AQ29RF7 1337 aaKnown RBP4.81□□□□□ -1.64
UBE4A-201ENST00000252108 ATP8B1O43520 1251 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 SLU7O95391 586 aaKnown RBP4.81□□□□□ -1.64
UBE4A-201ENST00000252108 A1BGP04217 495 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 IL2RBP14784 551 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 MCM3P25205 808 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 PTPAQ15257 358 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 UBE3BQ7Z3V4 1068 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 NBPF11Q86T75 865 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 SPC24Q8NBT2 197 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 KIAA1524Q8TCG1 905 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 FAM107BQ9H098 131 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 NDUFB9Q9Y6M9 179 aa4.81□□□□□ -1.64
UBE4A-201ENST00000252108 FANCGO15287 622 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms