RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 CCDC144CPQ8IYA2 1237 aa16.78■□□□□ 0.28
HIF3A-202ENST00000244303 TTLL11Q8NHH1 800 aa16.78■□□□□ 0.28
HIF3A-202ENST00000244303 MRPS27Q92552 414 aaKnown RBP16.78■□□□□ 0.28
HIF3A-202ENST00000244303 ORC3Q9UBD5 711 aaPredicted RBP16.78■□□□□ 0.28
HIF3A-202ENST00000244303 CLIC4Q9Y696 253 aa16.78■□□□□ 0.28
HIF3A-202ENST00000244303 SPATA31A1Q5TZJ5 1347 aa16.78■□□□□ 0.28
HIF3A-202ENST00000244303 A0A1B0GVL5 298 aa16.77■□□□□ 0.28
HIF3A-202ENST00000244303 IL6STP40189 918 aaPredicted RBP16.77■□□□□ 0.28
HIF3A-202ENST00000244303 CHAF1AQ13111 956 aaPredicted RBP16.77■□□□□ 0.28
HIF3A-202ENST00000244303 ADALQ6DHV7 355 aa16.77■□□□□ 0.28
HIF3A-202ENST00000244303 DZIP3Q86Y13 1208 aaKnown RBP16.77■□□□□ 0.28
HIF3A-202ENST00000244303 FMR1NBQ8N0W7 255 aaPredicted RBP16.77■□□□□ 0.28
HIF3A-202ENST00000244303 LINC00301Q8NCQ3 95 aa16.77■□□□□ 0.28
HIF3A-202ENST00000244303 FBXO18Q8NFZ0 1043 aa16.77■□□□□ 0.28
HIF3A-202ENST00000244303 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.77■□□□□ 0.28
HIF3A-202ENST00000244303 GJB4Q9NTQ9 266 aa16.77■□□□□ 0.28
HIF3A-202ENST00000244303 TBC1D2BQ9UPU7 963 aa16.77■□□□□ 0.28
HIF3A-202ENST00000244303 WNK3Q9BYP7 1800 aa16.77■□□□□ 0.28
HIF3A-202ENST00000244303 FAM177BA6PVY3 158 aa16.77■□□□□ 0.27
HIF3A-202ENST00000244303 ERVV-1B6SEH8 477 aa16.77■□□□□ 0.27
HIF3A-202ENST00000244303 CPLX1O14810 134 aa16.77■□□□□ 0.27
HIF3A-202ENST00000244303 DHX40Q8IX18 779 aaKnown RBP16.77■□□□□ 0.27
HIF3A-202ENST00000244303 CACTINQ8WUQ7 758 aaKnown RBP16.77■□□□□ 0.27
HIF3A-202ENST00000244303 NBPF3Q9H094 633 aa16.77■□□□□ 0.27
HIF3A-202ENST00000244303 CNNM1Q9NRU3 951 aa16.77■□□□□ 0.27
HIF3A-202ENST00000244303 ANO10Q9NW15 660 aa16.77■□□□□ 0.27
HIF3A-202ENST00000244303 BECN2A8MW95 431 aa16.76■□□□□ 0.27
HIF3A-202ENST00000244303 IRS4O14654 1257 aaPredicted RBP16.76■□□□□ 0.27
HIF3A-202ENST00000244303 ADD2P35612 726 aa16.76■□□□□ 0.27
HIF3A-202ENST00000244303 CTSWP56202 376 aa16.76■□□□□ 0.27
HIF3A-202ENST00000244303 STK38Q15208 465 aa16.76■□□□□ 0.27
HIF3A-202ENST00000244303 DDB1Q16531 1140 aa16.76■□□□□ 0.27
HIF3A-202ENST00000244303 ZNF710Q8N1W2 664 aa16.76■□□□□ 0.27
HIF3A-202ENST00000244303 TRMT112Q9UI30 125 aaKnown RBP16.76■□□□□ 0.27
HIF3A-202ENST00000244303 DENND2AQ9ULE3 1009 aa16.76■□□□□ 0.27
HIF3A-202ENST00000244303 ECM29Q5VYK3 1845 aa16.76■□□□□ 0.27
HIF3A-202ENST00000244303 ANKRD18BA2A2Z9 1011 aa16.76■□□□□ 0.27
HIF3A-202ENST00000244303 RIOK3O14730 519 aaKnown RBP16.76■□□□□ 0.27
HIF3A-202ENST00000244303 NDUFA8P51970 172 aa16.76■□□□□ 0.27
HIF3A-202ENST00000244303 SF3A1Q15459 793 aaKnown RBP16.76■□□□□ 0.27
HIF3A-202ENST00000244303 SLC9C2Q5TAH2 1124 aa16.76■□□□□ 0.27
HIF3A-202ENST00000244303 THRAP3Q9Y2W1 955 aaKnown RBP16.76■□□□□ 0.27
HIF3A-202ENST00000244303 A0A1W2PQ27 194 aa16.75■□□□□ 0.27
HIF3A-202ENST00000244303 A0A1W2PQ64 194 aa16.75■□□□□ 0.27
HIF3A-202ENST00000244303 A0A1W2PQD8 194 aa16.75■□□□□ 0.27
HIF3A-202ENST00000244303 MYSM1Q5VVJ2 828 aa16.75■□□□□ 0.27
HIF3A-202ENST00000244303 VGLL2Q8N8G2 317 aa16.75■□□□□ 0.27
HIF3A-202ENST00000244303 FBXW7Q969H0 707 aa16.75■□□□□ 0.27
HIF3A-202ENST00000244303 MRFAP1L1Q96HT8 127 aa16.75■□□□□ 0.27
HIF3A-202ENST00000244303 POLR3EQ9NVU0 708 aa16.75■□□□□ 0.27
HIF3A-202ENST00000244303 WDR19Q8NEZ3 1342 aa16.75■□□□□ 0.27
HIF3A-202ENST00000244303 CHD4Q14839 1912 aa16.75■□□□□ 0.27
HIF3A-202ENST00000244303 ATRNO75882 1429 aa16.75■□□□□ 0.27
HIF3A-202ENST00000244303 KIF28PB7ZC32 967 aa16.75■□□□□ 0.27
HIF3A-202ENST00000244303 TBC1D10CQ8IV04 446 aa16.75■□□□□ 0.27
HIF3A-202ENST00000244303 NKX2-3Q8TAU0 364 aa16.75■□□□□ 0.27
HIF3A-202ENST00000244303 KCNG4Q8TDN1 519 aa16.75■□□□□ 0.27
HIF3A-202ENST00000244303 SDF4Q9BRK5 362 aa16.75■□□□□ 0.27
HIF3A-202ENST00000244303 PIH1D3Q9NQM4 214 aaKnown RBP16.75■□□□□ 0.27
HIF3A-202ENST00000244303 DOT1LQ8TEK3 1739 aa16.74■□□□□ 0.27
HIF3A-202ENST00000244303 A0A0G2JS52 829 aa16.74■□□□□ 0.27
HIF3A-202ENST00000244303 YEATS4O95619 227 aa16.74■□□□□ 0.27
HIF3A-202ENST00000244303 BRAPQ7Z569 592 aa16.74■□□□□ 0.27
HIF3A-202ENST00000244303 CEP57L1Q8IYX8 460 aa16.74■□□□□ 0.27
HIF3A-202ENST00000244303 ZNF34Q8IZ26 560 aa16.74■□□□□ 0.27
HIF3A-202ENST00000244303 ACSBG1Q96GR2 724 aa16.74■□□□□ 0.27
HIF3A-202ENST00000244303 ZNF512BQ96KM6 892 aaPredicted RBP16.74■□□□□ 0.27
HIF3A-202ENST00000244303 SPTLC2O15270 562 aa16.73■□□□□ 0.27
HIF3A-202ENST00000244303 PDE8AO60658 829 aa16.73■□□□□ 0.27
HIF3A-202ENST00000244303 IDH1O75874 414 aaKnown RBP16.73■□□□□ 0.27
HIF3A-202ENST00000244303 TRDNQ13061 729 aa16.73■□□□□ 0.27
HIF3A-202ENST00000244303 TTF1Q15361 905 aaPredicted RBP16.73■□□□□ 0.27
HIF3A-202ENST00000244303 AOPEPQ8N6M6 819 aa16.73■□□□□ 0.27
HIF3A-202ENST00000244303 C16orf45Q96MC5 204 aaPredicted RBP16.73■□□□□ 0.27
HIF3A-202ENST00000244303 BCL2L12Q9HB09 334 aa16.73■□□□□ 0.27
HIF3A-202ENST00000244303 LTBP4Q8N2S1 1624 aa16.73■□□□□ 0.27
HIF3A-202ENST00000244303 PDE8BO95263 885 aa16.73■□□□□ 0.27
HIF3A-202ENST00000244303 EIF5P55010 431 aaKnown RBP16.73■□□□□ 0.27
HIF3A-202ENST00000244303 KIF23Q02241 960 aaPredicted RBP16.73■□□□□ 0.27
HIF3A-202ENST00000244303 INTS5Q6P9B9 1019 aaKnown RBP16.73■□□□□ 0.27
HIF3A-202ENST00000244303 CYB5R4Q7L1T6 521 aa16.73■□□□□ 0.27
HIF3A-202ENST00000244303 LRRC8AQ8IWT6 810 aa16.73■□□□□ 0.27
HIF3A-202ENST00000244303 MARCH10Q8NA82 808 aaPredicted RBP16.73■□□□□ 0.27
HIF3A-202ENST00000244303 CCDC94Q9BW85 323 aaPredicted RBP16.73■□□□□ 0.27
HIF3A-202ENST00000244303 ANGEL1Q9UNK9 670 aaKnown RBP16.73■□□□□ 0.27
HIF3A-202ENST00000244303 UBN2Q6ZU65 1347 aa16.73■□□□□ 0.27
HIF3A-202ENST00000244303 NUTM2BA6NNL0 878 aaPredicted RBP16.72■□□□□ 0.27
HIF3A-202ENST00000244303 NUTM2EB1AL46 878 aaPredicted RBP16.72■□□□□ 0.27
HIF3A-202ENST00000244303 APPP05067 770 aa16.72■□□□□ 0.27
HIF3A-202ENST00000244303 PHKA1P46020 1223 aa16.72■□□□□ 0.27
HIF3A-202ENST00000244303 ARID5BQ14865 1188 aa16.72■□□□□ 0.27
HIF3A-202ENST00000244303 NUTM2AQ8IVF1 878 aaPredicted RBP16.72■□□□□ 0.27
HIF3A-202ENST00000244303 ZNF532Q9HCE3 1301 aa16.72■□□□□ 0.27
HIF3A-202ENST00000244303 ARAP2Q8WZ64 1704 aa16.72■□□□□ 0.27
HIF3A-202ENST00000244303 ZMYM6O95789 1325 aa16.72■□□□□ 0.27
HIF3A-202ENST00000244303 NEDD4P46934 1319 aa16.72■□□□□ 0.27
HIF3A-202ENST00000244303 UBE3CQ15386 1083 aa16.72■□□□□ 0.27
HIF3A-202ENST00000244303 CCDC102BQ68D86 513 aa16.72■□□□□ 0.27
HIF3A-202ENST00000244303 SYNE3Q6ZMZ3 975 aa16.72■□□□□ 0.27
HIF3A-202ENST00000244303 SMAP1Q8IYB5 467 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms