RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 CDC37L1Q7L3B6 337 aa11.28□□□□□ -0.6
TGFB3-201ENST00000238682 ATG9AQ7Z3C6 839 aa11.28□□□□□ -0.6
TGFB3-201ENST00000238682 PODNQ7Z5L7 613 aa11.28□□□□□ -0.6
TGFB3-201ENST00000238682 ANP32BQ92688 251 aaKnown RBP11.28□□□□□ -0.6
TGFB3-201ENST00000238682 GREM2Q9H772 168 aa11.28□□□□□ -0.6
TGFB3-201ENST00000238682 GMPSP49915 693 aaPredicted RBP11.27□□□□□ -0.61
TGFB3-201ENST00000238682 FKBP1AP62942 108 aaKnown RBP11.27□□□□□ -0.61
TGFB3-201ENST00000238682 TBC1D16Q8TBP0 767 aa11.27□□□□□ -0.61
TGFB3-201ENST00000238682 MPHOSPH8Q99549 860 aa11.27□□□□□ -0.61
TGFB3-201ENST00000238682 ZC3H12CQ9C0D7 883 aaKnown RBP11.27□□□□□ -0.61
TGFB3-201ENST00000238682 PDS5AQ29RF7 1337 aaKnown RBP11.27□□□□□ -0.61
TGFB3-201ENST00000238682 VIL1P09327 827 aaKnown RBP11.27□□□□□ -0.61
TGFB3-201ENST00000238682 ZNF280AP59817 542 aaPredicted RBP11.27□□□□□ -0.61
TGFB3-201ENST00000238682 LDHAL6AQ6ZMR3 332 aa11.27□□□□□ -0.61
TGFB3-201ENST00000238682 EXOC6BQ9Y2D4 811 aa11.27□□□□□ -0.61
TGFB3-201ENST00000238682 CHMP3Q9Y3E7 222 aa11.27□□□□□ -0.61
TGFB3-201ENST00000238682 GLRX3O76003 335 aaKnown RBP11.26□□□□□ -0.61
TGFB3-201ENST00000238682 SASH1O94885 1247 aa11.26□□□□□ -0.61
TGFB3-201ENST00000238682 IFIT2P09913 472 aaKnown RBP11.26□□□□□ -0.61
TGFB3-201ENST00000238682 HSPA1AP0DMV8 641 aaKnown RBP11.26□□□□□ -0.61
TGFB3-201ENST00000238682 HSPA1BP0DMV9 641 aaKnown RBP11.26□□□□□ -0.61
TGFB3-201ENST00000238682 GPSM2P81274 684 aa11.26□□□□□ -0.61
TGFB3-201ENST00000238682 UBE4AQ14139 1066 aa11.26□□□□□ -0.61
TGFB3-201ENST00000238682 DEFB115Q30KQ5 88 aa11.26□□□□□ -0.61
TGFB3-201ENST00000238682 EPB41L2O43491 1005 aaKnown RBP11.26□□□□□ -0.61
TGFB3-201ENST00000238682 MX1P20591 662 aa11.26□□□□□ -0.61
TGFB3-201ENST00000238682 GSE1Q14687 1217 aa11.26□□□□□ -0.61
TGFB3-201ENST00000238682 PUM3Q15397 648 aaKnown RBP11.26□□□□□ -0.61
TGFB3-201ENST00000238682 TNNI3KQ59H18 835 aa11.26□□□□□ -0.61
TGFB3-201ENST00000238682 PLEKHM2Q8IWE5 1019 aa11.26□□□□□ -0.61
TGFB3-201ENST00000238682 KRI1Q8N9T8 703 aaKnown RBP11.26□□□□□ -0.61
TGFB3-201ENST00000238682 COA1Q9GZY4 146 aa11.26□□□□□ -0.61
TGFB3-201ENST00000238682 FPGT-TNNI3KV9GXZ4 949 aa11.26□□□□□ -0.61
TGFB3-201ENST00000238682 ECE2O60344 883 aa11.25□□□□□ -0.61
TGFB3-201ENST00000238682 PDE8BO95263 885 aa11.25□□□□□ -0.61
TGFB3-201ENST00000238682 VGLL2Q8N8G2 317 aa11.25□□□□□ -0.61
TGFB3-201ENST00000238682 LPIN2Q92539 896 aa11.25□□□□□ -0.61
TGFB3-201ENST00000238682 CELF1Q92879 486 aaKnown RBP11.25□□□□□ -0.61
TGFB3-201ENST00000238682 CNNM1Q9NRU3 951 aa11.25□□□□□ -0.61
TGFB3-201ENST00000238682 ECHDC1Q9NTX5 307 aa11.25□□□□□ -0.61
TGFB3-201ENST00000238682 G3V3G9 751 aa11.25□□□□□ -0.61
TGFB3-201ENST00000238682 C6orf229H3BNL8 230 aa11.25□□□□□ -0.61
TGFB3-201ENST00000238682 C8orf34Q49A92 452 aa11.25□□□□□ -0.61
TGFB3-201ENST00000238682 DCAF8Q5TAQ9 597 aa11.25□□□□□ -0.61
TGFB3-201ENST00000238682 UQCRFS1P1P0C7P4 283 aa11.24□□□□□ -0.61
TGFB3-201ENST00000238682 SLC5A1P13866 664 aa11.24□□□□□ -0.61
TGFB3-201ENST00000238682 ATP5JP18859 108 aa11.24□□□□□ -0.61
TGFB3-201ENST00000238682 PDE1AP54750 535 aa11.24□□□□□ -0.61
TGFB3-201ENST00000238682 LRRFIP1Q32MZ4 808 aaKnown RBP11.24□□□□□ -0.61
TGFB3-201ENST00000238682 TTC22Q5TAA0 569 aa11.24□□□□□ -0.61
TGFB3-201ENST00000238682 OLFM4Q6UX06 510 aa11.24□□□□□ -0.61
TGFB3-201ENST00000238682 ZNF662Q6ZS27 426 aa11.24□□□□□ -0.61
TGFB3-201ENST00000238682 LNPKQ9C0E8 428 aa11.24□□□□□ -0.61
TGFB3-201ENST00000238682 NSFL1CQ9UNZ2 370 aaKnown RBP11.24□□□□□ -0.61
TGFB3-201ENST00000238682 HIP1O00291 1037 aa11.24□□□□□ -0.61
TGFB3-201ENST00000238682 UFL1O94874 794 aa11.24□□□□□ -0.61
TGFB3-201ENST00000238682 IFIT1P09914 478 aaKnown RBP11.24□□□□□ -0.61
TGFB3-201ENST00000238682 FGFR2P21802 821 aa11.24□□□□□ -0.61
TGFB3-201ENST00000238682 METTL24Q5JXM2 366 aa11.24□□□□□ -0.61
TGFB3-201ENST00000238682 RSBN1LQ6PCB5 846 aaPredicted RBP11.24□□□□□ -0.61
TGFB3-201ENST00000238682 MAP7D2Q96T17 732 aa11.24□□□□□ -0.61
TGFB3-201ENST00000238682 SAGE1Q9NXZ1 904 aa11.24□□□□□ -0.61
TGFB3-201ENST00000238682 CNOT7Q9UIV1 285 aaKnown RBP11.24□□□□□ -0.61
TGFB3-201ENST00000238682 SERPINA10Q9UK55 444 aa11.24□□□□□ -0.61
TGFB3-201ENST00000238682 WDR33Q9C0J8 1336 aaKnown RBP11.23□□□□□ -0.61
TGFB3-201ENST00000238682 EPS15P42566 896 aa11.23□□□□□ -0.61
TGFB3-201ENST00000238682 WBP1LQ9NX94 342 aa11.23□□□□□ -0.61
TGFB3-201ENST00000238682 PA2G4Q9UQ80 394 aaKnown RBP11.23□□□□□ -0.61
TGFB3-201ENST00000238682 PAPPA2Q9BXP8 1791 aa11.23□□□□□ -0.61
TGFB3-201ENST00000238682 USP17L3A6NCW0 530 aa11.23□□□□□ -0.61
TGFB3-201ENST00000238682 USP17L4A6NCW7 530 aa11.23□□□□□ -0.61
TGFB3-201ENST00000238682 TFCP2Q12800 502 aa11.23□□□□□ -0.61
TGFB3-201ENST00000238682 CASC1Q6TDU7 716 aa11.23□□□□□ -0.61
TGFB3-201ENST00000238682 USP17L1Q7RTZ2 530 aa11.23□□□□□ -0.61
TGFB3-201ENST00000238682 DCPSQ96C86 337 aaKnown RBP11.23□□□□□ -0.61
TGFB3-201ENST00000238682 ANKIB1Q9P2G1 1089 aa11.23□□□□□ -0.61
TGFB3-201ENST00000238682 POLLQ9UGP5 575 aa11.23□□□□□ -0.61
TGFB3-201ENST00000238682 PPP2R3BQ9Y5P8 575 aa11.23□□□□□ -0.61
TGFB3-201ENST00000238682 ATP2B3Q16720 1220 aa11.22□□□□□ -0.61
TGFB3-201ENST00000238682 CCDC158Q5M9N0 1113 aa11.22□□□□□ -0.61
TGFB3-201ENST00000238682 STRIP1Q5VSL9 837 aa11.22□□□□□ -0.61
TGFB3-201ENST00000238682 AACSQ86V21 672 aa11.22□□□□□ -0.61
TGFB3-201ENST00000238682 JARID2Q92833 1246 aaPredicted RBP11.22□□□□□ -0.61
TGFB3-201ENST00000238682 CCDC102AQ96A19 550 aa11.22□□□□□ -0.61
TGFB3-201ENST00000238682 PLSCR2Q9NRY7 297 aa11.22□□□□□ -0.61
TGFB3-201ENST00000238682 YDJCA8MPS7 323 aa11.22□□□□□ -0.61
TGFB3-201ENST00000238682 MICALL2Q8IY33 904 aa11.22□□□□□ -0.61
TGFB3-201ENST00000238682 SPATA32Q96LK8 384 aa11.22□□□□□ -0.61
TGFB3-201ENST00000238682 LOC102724159A0A0B4J2E5 919 aa11.21□□□□□ -0.61
TGFB3-201ENST00000238682 PSMD14O00487 310 aa11.21□□□□□ -0.61
TGFB3-201ENST00000238682 VEGFBP49765 207 aa11.21□□□□□ -0.61
TGFB3-201ENST00000238682 NOGQ13253 232 aa11.21□□□□□ -0.61
TGFB3-201ENST00000238682 PWP2Q15269 919 aaKnown RBP11.21□□□□□ -0.61
TGFB3-201ENST00000238682 BEGAINQ9BUH8 593 aa11.21□□□□□ -0.61
TGFB3-201ENST00000238682 GNL3LQ9NVN8 582 aaKnown RBP11.21□□□□□ -0.61
TGFB3-201ENST00000238682 HDAC9Q9UKV0 1011 aa11.21□□□□□ -0.61
TGFB3-201ENST00000238682 ABT1Q9ULW3 272 aaKnown RBP11.21□□□□□ -0.61
TGFB3-201ENST00000238682 POTEIP0CG38 1075 aa11.2□□□□□ -0.62
TGFB3-201ENST00000238682 POTEJP0CG39 1038 aa11.2□□□□□ -0.62
TGFB3-201ENST00000238682 KIF4BQ2VIQ3 1234 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms