RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 TEKT1Q969V4 418 aa2.9□□□□□ -1.95
PRKD3-201ENST00000234179 COA7Q96BR5 231 aa2.9□□□□□ -1.95
PRKD3-201ENST00000234179 DLL1O00548 723 aa2.9□□□□□ -1.95
PRKD3-201ENST00000234179 GLRX3O76003 335 aaKnown RBP2.9□□□□□ -1.95
PRKD3-201ENST00000234179 CAVIN4Q5BKX8 364 aa2.9□□□□□ -1.95
PRKD3-201ENST00000234179 HHIPL2Q6UWX4 724 aa2.9□□□□□ -1.95
PRKD3-201ENST00000234179 WDR66Q8TBY9 1149 aa2.9□□□□□ -1.95
PRKD3-201ENST00000234179 SRCAPQ6ZRS2 3230 aa2.9□□□□□ -1.95
PRKD3-201ENST00000234179 IGF2BP3O00425 579 aaKnown RBP eCLIP2.89□□□□□ -1.95
PRKD3-201ENST00000234179 GTF2IP78347 998 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 RASA3Q14644 834 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 CERS3Q8IU89 383 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.89□□□□□ -1.95
PRKD3-201ENST00000234179 THUMPD2Q9BTF0 503 aaKnown RBP2.89□□□□□ -1.95
PRKD3-201ENST00000234179 MIS18AQ9NYP9 233 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 ZNF70Q9UC06 446 aaPredicted RBP2.89□□□□□ -1.95
PRKD3-201ENST00000234179 MSCO60682 206 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 PROSER3Q2NL68 480 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 CCDC57Q2TAC2 916 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 NBPF9Q3BBW0 867 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 CCDC174Q6PII3 467 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 ZNF428Q96B54 188 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 OPTNQ96CV9 577 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 VEZTQ9HBM0 779 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 BIN2Q9UBW5 565 aaPredicted RBP2.89□□□□□ -1.95
PRKD3-201ENST00000234179 COLQQ9Y215 455 aaPredicted RBP2.89□□□□□ -1.95
PRKD3-201ENST00000234179 PTCH2Q9Y6C5 1203 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 MYPNQ86TC9 1320 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 H0YGN5 161 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 EVI5O60447 810 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 FMNL1O95466 1100 aaPredicted RBP2.89□□□□□ -1.95
PRKD3-201ENST00000234179 KIAA0825Q8IV33 1275 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 FAM151AQ8WW52 585 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 PDS5AQ29RF7 1337 aaKnown RBP2.89□□□□□ -1.95
PRKD3-201ENST00000234179 ATP5J2-PTCD1G3V325 749 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 ENTPD3O75355 529 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 USP2O75604 605 aaPredicted RBP2.89□□□□□ -1.95
PRKD3-201ENST00000234179 SGPL1O95470 568 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 IFIT1P09914 478 aaKnown RBP2.89□□□□□ -1.95
PRKD3-201ENST00000234179 HIBADHP31937 336 aaKnown RBP2.89□□□□□ -1.95
PRKD3-201ENST00000234179 RBM5P52756 815 aaKnown RBP eCLIP2.89□□□□□ -1.95
PRKD3-201ENST00000234179 GCKRQ14397 625 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 SPTY2D1Q68D10 685 aaPredicted RBP2.89□□□□□ -1.95
PRKD3-201ENST00000234179 C17orf99Q6UX52 265 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 VPS37DQ86XT2 251 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 TDRD7Q8NHU6 1098 aaKnown RBP2.89□□□□□ -1.95
PRKD3-201ENST00000234179 BRI3BPQ8WY22 251 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 LDHCP07864 332 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 DNAAF4Q8WXU2 420 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 NBPF3Q9H094 633 aa2.89□□□□□ -1.95
PRKD3-201ENST00000234179 ARIH1Q9Y4X5 557 aaPredicted RBP2.89□□□□□ -1.95
PRKD3-201ENST00000234179 POTEFA5A3E0 1075 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 EGFRP00533 1210 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 ITGA6P23229 1130 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 PROCA1Q8NCQ7 364 aaPredicted RBP2.88□□□□□ -1.95
PRKD3-201ENST00000234179 SOCS4Q8WXH5 440 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 OTUD5Q96G74 571 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 ZDHHC15Q96MV8 337 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 PRO3102Q9H379 93 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 AS3MTQ9HBK9 375 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 SEC31BQ9NQW1 1179 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 PICK1Q9NRD5 415 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 ZNF112Q9UJU3 913 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 SHTN1A0MZ66 631 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 NEURL1BA8MQ27 555 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 PSMC4P43686 418 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 CHRNDQ07001 517 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 MFSD14BQ5SR56 506 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 UBE2Q1Q7Z7E8 422 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 MS4A4AQ96JQ5 239 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 SEZ6LQ9BYH1 1024 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 RNF208Q9H0X6 261 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 ELP3Q9H9T3 547 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 TTF2Q9UNY4 1162 aaKnown RBP2.88□□□□□ -1.95
PRKD3-201ENST00000234179 HMGCRP04035 888 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 CCL5P13501 91 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 EN2P19622 333 aaPredicted RBP2.88□□□□□ -1.95
PRKD3-201ENST00000234179 OSBPP22059 807 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 ZEB1P37275 1124 aaPredicted RBP2.88□□□□□ -1.95
PRKD3-201ENST00000234179 FAM110CQ1W6H9 321 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 U2AF1L4Q8WU68 220 aaKnown RBP2.88□□□□□ -1.95
PRKD3-201ENST00000234179 CNNM1Q9NRU3 951 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 MAP3K2Q9Y2U5 619 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 RIPOR2Q9Y4F9 1068 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 COL2A1P02458 1487 aaPredicted RBP2.88□□□□□ -1.95
PRKD3-201ENST00000234179 GSTO1P78417 241 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 DZIP1LQ8IYY4 767 aaKnown RBP2.88□□□□□ -1.95
PRKD3-201ENST00000234179 CRISPLD2Q9H0B8 497 aa2.88□□□□□ -1.95
PRKD3-201ENST00000234179 LAS1LQ9Y4W2 734 aaKnown RBP2.88□□□□□ -1.95
PRKD3-201ENST00000234179 KIAA0100Q14667 2235 aaKnown RBP2.88□□□□□ -1.95
PRKD3-201ENST00000234179 TNPO2O14787 897 aaKnown RBP2.87□□□□□ -1.95
PRKD3-201ENST00000234179 ADCY3O60266 1144 aa2.87□□□□□ -1.95
PRKD3-201ENST00000234179 FRAT2O75474 233 aaPredicted RBP2.87□□□□□ -1.95
PRKD3-201ENST00000234179 BCRP11274 1271 aa2.87□□□□□ -1.95
PRKD3-201ENST00000234179 CRKP46108 304 aa2.87□□□□□ -1.95
PRKD3-201ENST00000234179 CCNA1P78396 465 aa2.87□□□□□ -1.95
PRKD3-201ENST00000234179 PDE3AQ14432 1141 aa2.87□□□□□ -1.95
PRKD3-201ENST00000234179 ATF7IPQ6VMQ6 1270 aa2.87□□□□□ -1.95
PRKD3-201ENST00000234179 LDHAL6AQ6ZMR3 332 aa2.87□□□□□ -1.95
PRKD3-201ENST00000234179 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms