RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 EBAG9O00559 213 aa15.1■□□□□ 0.01
NEK4-201ENST00000233027 HDXQ7Z353 690 aa15.1■□□□□ 0.01
NEK4-201ENST00000233027 UBLCP1Q8WVY7 318 aaPredicted RBP15.1■□□□□ 0.01
NEK4-201ENST00000233027 FAM13AO94988 1023 aa15.1■□□□□ 0.01
NEK4-201ENST00000233027 VPS16Q9H269 839 aa15.1■□□□□ 0.01
NEK4-201ENST00000233027 BIVM-ERCC5R4GMW8 1640 aa15.1■□□□□ 0.01
NEK4-201ENST00000233027 FERP16591 822 aa15.1■□□□□ 0.01
NEK4-201ENST00000233027 RAPGEF1Q13905 1077 aa15.1■□□□□ 0.01
NEK4-201ENST00000233027 SETDB2Q96T68 719 aa15.1■□□□□ 0.01
NEK4-201ENST00000233027 DCAF17Q5H9S7 520 aaPredicted RBP15.1■□□□□ 0.01
NEK4-201ENST00000233027 CCDC63Q8NA47 563 aa15.1■□□□□ 0.01
NEK4-201ENST00000233027 CBX8Q9HC52 389 aa15.1■□□□□ 0.01
NEK4-201ENST00000233027 ZBTB21Q9ULJ3 1066 aa15.1■□□□□ 0.01
NEK4-201ENST00000233027 KDM2BQ8NHM5 1336 aa15.1■□□□□ 0.01
NEK4-201ENST00000233027 B4E1Z4 1266 aa15.09■□□□□ 0.01
NEK4-201ENST00000233027 KLHDC4Q8TBB5 520 aa15.09■□□□□ 0.01
NEK4-201ENST00000233027 NCKAP5LQ9HCH0 1330 aa15.09■□□□□ 0.01
NEK4-201ENST00000233027 GNAT2P19087 354 aa15.09■□□□□ 0.01
NEK4-201ENST00000233027 CALML3P27482 149 aa15.09■□□□□ 0.01
NEK4-201ENST00000233027 PRPHP41219 470 aa15.09■□□□□ 0.01
NEK4-201ENST00000233027 CPLX4Q7Z7G2 160 aa15.09■□□□□ 0.01
NEK4-201ENST00000233027 FAM76AQ8TAV0 307 aa15.09■□□□□ 0.01
NEK4-201ENST00000233027 PPM1EQ8WY54 764 aa15.09■□□□□ 0.01
NEK4-201ENST00000233027 FAM227BQ96M60 508 aa15.09■□□□□ 0.01
NEK4-201ENST00000233027 KCNK9Q9NPC2 374 aa15.09■□□□□ 0.01
NEK4-201ENST00000233027 MAPK8IP1Q9UQF2 711 aa15.09■□□□□ 0.01
NEK4-201ENST00000233027 RAD50Q92878 1312 aa15.09■□□□□ 0.01
NEK4-201ENST00000233027 IRS4O14654 1257 aaPredicted RBP15.09■□□□□ 0.01
NEK4-201ENST00000233027 PPARDQ03181 441 aa15.09■□□□□ 0.01
NEK4-201ENST00000233027 DZIP3Q86Y13 1208 aaKnown RBP15.09■□□□□ 0.01
NEK4-201ENST00000233027 CABLES1Q8TDN4 633 aa15.09■□□□□ 0.01
NEK4-201ENST00000233027 EYA1Q99502 592 aa15.09■□□□□ 0.01
NEK4-201ENST00000233027 OTUD7BQ6GQQ9 843 aa15.09■□□□□ 0.01
NEK4-201ENST00000233027 FAM212AQ96EL1 285 aa15.09■□□□□ 0.01
NEK4-201ENST00000233027 LONRF3Q496Y0 759 aa15.09■□□□□ 0.01
NEK4-201ENST00000233027 IGSF22Q8N9C0 903 aa15.09■□□□□ 0.01
NEK4-201ENST00000233027 LAMC3Q9Y6N6 1575 aa15.09■□□□□ 0.01
NEK4-201ENST00000233027 MBD4O95243 580 aa15.08■□□□□ 0.01
NEK4-201ENST00000233027 RNASE9P60153 205 aaKnown RBP15.08■□□□□ 0.01
NEK4-201ENST00000233027 CNGA4Q8IV77 575 aa15.08■□□□□ 0.01
NEK4-201ENST00000233027 SIRT1Q96EB6 747 aa15.08■□□□□ 0.01
NEK4-201ENST00000233027 FERMT1Q9BQL6 677 aa15.08■□□□□ 0.01
NEK4-201ENST00000233027 APBB1IPQ7Z5R6 666 aaPredicted RBP15.08■□□□□ 0
NEK4-201ENST00000233027 DDX12PQ92771 950 aa15.08■□□□□ 0
NEK4-201ENST00000233027 ERO1AQ96HE7 468 aa15.08■□□□□ 0
NEK4-201ENST00000233027 CCDC77Q9BR77 488 aa15.08■□□□□ 0
NEK4-201ENST00000233027 STMN4Q9H169 189 aaPredicted RBP15.08■□□□□ 0
NEK4-201ENST00000233027 ZMYM4Q5VZL5 1548 aa15.08■□□□□ 0
NEK4-201ENST00000233027 PLCB3Q01970 1234 aa15.08■□□□□ 0
NEK4-201ENST00000233027 ELF2Q15723 593 aa15.08■□□□□ 0
NEK4-201ENST00000233027 GPIHBP1Q8IV16 184 aa15.08■□□□□ 0
NEK4-201ENST00000233027 CLSTN2Q9H4D0 955 aa15.08■□□□□ 0
NEK4-201ENST00000233027 HELLSQ9NRZ9 838 aa15.08■□□□□ 0
NEK4-201ENST00000233027 URB2Q14146 1524 aaKnown RBP15.08■□□□□ 0
NEK4-201ENST00000233027 ZNF75DP51815 510 aa15.08■□□□□ 0
NEK4-201ENST00000233027 VAV2P52735 878 aa15.08■□□□□ 0
NEK4-201ENST00000233027 IQUBQ8NA54 791 aa15.08■□□□□ 0
NEK4-201ENST00000233027 FLT4P35916 1363 aa15.07■□□□□ 0
NEK4-201ENST00000233027 TNRQ92752 1358 aa15.07■□□□□ 0
NEK4-201ENST00000233027 TSGA10Q9BZW7 698 aa15.07■□□□□ 0
NEK4-201ENST00000233027 TIMM10P62072 90 aa15.07■□□□□ 0
NEK4-201ENST00000233027 PPP1R7Q15435 360 aa15.07■□□□□ 0
NEK4-201ENST00000233027 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.07■□□□□ 0
NEK4-201ENST00000233027 CCDC114Q96M63 670 aa15.07■□□□□ 0
NEK4-201ENST00000233027 RABEP2Q9H5N1 569 aa15.07■□□□□ 0
NEK4-201ENST00000233027 NDUFB9Q9Y6M9 179 aa15.07■□□□□ 0
NEK4-201ENST00000233027 ZBTB16Q05516 673 aa15.07■□□□□ 0
NEK4-201ENST00000233027 NOC4LQ9BVI4 516 aaKnown RBP15.07■□□□□ 0
NEK4-201ENST00000233027 DMRT2Q9Y5R5 561 aa15.07■□□□□ 0
NEK4-201ENST00000233027 SPDYE3A6NKU9 549 aa15.07■□□□□ 0
NEK4-201ENST00000233027 NLRP3Q96P20 1036 aa15.07■□□□□ 0
NEK4-201ENST00000233027 CARD6Q9BX69 1037 aa15.07■□□□□ 0
NEK4-201ENST00000233027 FANCCQ00597 558 aa15.06■□□□□ 0
NEK4-201ENST00000233027 ZNF804AQ7Z570 1209 aa15.06■□□□□ 0
NEK4-201ENST00000233027 ZNF354CQ86Y25 554 aa15.06■□□□□ 0
NEK4-201ENST00000233027 SAP30BPQ9UHR5 308 aaKnown RBP15.06■□□□□ 0
NEK4-201ENST00000233027 NPATQ14207 1427 aa15.06■□□□□ 0
NEK4-201ENST00000233027 CCDC160A6NGH7 325 aa15.06■□□□□ 0
NEK4-201ENST00000233027 HPDP32754 393 aaPredicted RBP15.06■□□□□ 0
NEK4-201ENST00000233027 LETM2Q2VYF4 491 aa15.06■□□□□ 0
NEK4-201ENST00000233027 ANO1Q5XXA6 986 aa15.06■□□□□ 0
NEK4-201ENST00000233027 USP37Q86T82 979 aa15.06■□□□□ 0
NEK4-201ENST00000233027 CFAP58Q5T655 872 aa15.06■□□□□ 0
NEK4-201ENST00000233027 CDC37L1Q7L3B6 337 aa15.06■□□□□ 0
NEK4-201ENST00000233027 RIMS2Q9UQ26 1411 aa15.06■□□□□ 0
NEK4-201ENST00000233027 ZNF608Q9ULD9 1512 aaPredicted RBP15.06■□□□□ 0
NEK4-201ENST00000233027 RNMTO43148 476 aaKnown RBP15.05■□□□□ 0
NEK4-201ENST00000233027 NAPGQ99747 312 aaPredicted RBP15.05■□□□□ 0
NEK4-201ENST00000233027 POLR2DO15514 142 aaKnown RBP15.05■□□□□ 0
NEK4-201ENST00000233027 PPM1FP49593 454 aaPredicted RBP15.05■□□□□ 0
NEK4-201ENST00000233027 PIK3AP1Q6ZUJ8 805 aa15.05■□□□□ 0
NEK4-201ENST00000233027 ARMT1Q9H993 441 aa15.05■□□□□ 0
NEK4-201ENST00000233027 TNNC1P63316 161 aa15.05■□□□□ -0
NEK4-201ENST00000233027 TNNI3KQ59H18 835 aa15.05■□□□□ -0
NEK4-201ENST00000233027 RBM28Q9NW13 759 aaKnown RBP15.05■□□□□ -0
NEK4-201ENST00000233027 KCNH3Q9ULD8 1083 aa15.05■□□□□ -0
NEK4-201ENST00000233027 FPGT-TNNI3KV9GXZ4 949 aa15.05■□□□□ -0
NEK4-201ENST00000233027 ZFYVE9O95405 1425 aa15.05■□□□□ -0
NEK4-201ENST00000233027 AFAP1L1Q8TED9 768 aa15.05■□□□□ -0
NEK4-201ENST00000233027 LMBRD1Q9NUN5 540 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms