RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 PRSS47A8MTI9 375 aa9.61□□□□□ -0.87
SPARC-201ENST00000231061 MAGEA10P43363 369 aaPredicted RBP9.61□□□□□ -0.87
SPARC-201ENST00000231061 AMPD3Q01432 767 aa9.61□□□□□ -0.87
SPARC-201ENST00000231061 FKBP5Q13451 457 aaPredicted RBP9.61□□□□□ -0.87
SPARC-201ENST00000231061 MTHFSDQ2M296 383 aaKnown RBP9.61□□□□□ -0.87
SPARC-201ENST00000231061 LCA5Q86VQ0 697 aa9.61□□□□□ -0.87
SPARC-201ENST00000231061 AS3MTQ9HBK9 375 aa9.61□□□□□ -0.87
SPARC-201ENST00000231061 MAP3K19Q56UN5 1328 aa9.61□□□□□ -0.87
SPARC-201ENST00000231061 ERC2O15083 957 aa9.6□□□□□ -0.87
SPARC-201ENST00000231061 PTPROQ16827 1216 aa9.6□□□□□ -0.87
SPARC-201ENST00000231061 C9orf131Q5VYM1 1079 aa9.6□□□□□ -0.87
SPARC-201ENST00000231061 DCLK2Q8N568 766 aa9.6□□□□□ -0.87
SPARC-201ENST00000231061 CENPTQ96BT3 561 aa9.6□□□□□ -0.87
SPARC-201ENST00000231061 ERP27Q96DN0 273 aa9.6□□□□□ -0.87
SPARC-201ENST00000231061 MMTAG2Q9BU76 263 aaKnown RBP9.6□□□□□ -0.87
SPARC-201ENST00000231061 PDGFDQ9GZP0 370 aaPredicted RBP9.6□□□□□ -0.87
SPARC-201ENST00000231061 DLG5Q8TDM6 1919 aa9.6□□□□□ -0.87
SPARC-201ENST00000231061 SLMAPQ14BN4 828 aa9.6□□□□□ -0.87
SPARC-201ENST00000231061 CAVIN1Q6NZI2 390 aaKnown RBP9.6□□□□□ -0.87
SPARC-201ENST00000231061 KIAA0232Q92628 1395 aa9.6□□□□□ -0.87
SPARC-201ENST00000231061 LTV1Q96GA3 475 aaPredicted RBP9.6□□□□□ -0.87
SPARC-201ENST00000231061 RGS12O14924 1447 aa9.6□□□□□ -0.87
SPARC-201ENST00000231061 B3GALNT1O75752 331 aa9.6□□□□□ -0.87
SPARC-201ENST00000231061 GNAI2P04899 355 aa9.6□□□□□ -0.87
SPARC-201ENST00000231061 ADD2P35612 726 aa9.6□□□□□ -0.87
SPARC-201ENST00000231061 NASPP49321 788 aaPredicted RBP9.6□□□□□ -0.87
SPARC-201ENST00000231061 CCT4P50991 539 aaKnown RBP9.6□□□□□ -0.87
SPARC-201ENST00000231061 CCDC73Q6ZRK6 1079 aa9.6□□□□□ -0.87
SPARC-201ENST00000231061 PARP9Q8IXQ6 854 aa9.6□□□□□ -0.87
SPARC-201ENST00000231061 CCDC65Q8IXS2 484 aa9.6□□□□□ -0.87
SPARC-201ENST00000231061 ZGPATQ8N5A5 531 aaKnown RBP9.6□□□□□ -0.87
SPARC-201ENST00000231061 RILPL2Q969X0 211 aa9.6□□□□□ -0.87
SPARC-201ENST00000231061 DDX27Q96GQ7 796 aaKnown RBP9.6□□□□□ -0.87
SPARC-201ENST00000231061 FAXDC2Q96IV6 333 aa9.6□□□□□ -0.87
SPARC-201ENST00000231061 PLEKHG4BQ96PX9 1271 aa9.6□□□□□ -0.87
SPARC-201ENST00000231061 AGLP35573 1532 aa9.6□□□□□ -0.87
SPARC-201ENST00000231061 GTF2F1P35269 517 aaKnown RBP eCLIP9.59□□□□□ -0.87
SPARC-201ENST00000231061 PKP1Q13835 747 aa9.59□□□□□ -0.87
SPARC-201ENST00000231061 RBBP5Q15291 538 aaKnown RBP9.59□□□□□ -0.87
SPARC-201ENST00000231061 OLFML1Q6UWY5 402 aa9.59□□□□□ -0.87
SPARC-201ENST00000231061 RELL1Q8IUW5 271 aa9.59□□□□□ -0.87
SPARC-201ENST00000231061 PLPP6Q8IY26 295 aa9.59□□□□□ -0.87
SPARC-201ENST00000231061 UBXN4Q92575 508 aa9.59□□□□□ -0.87
SPARC-201ENST00000231061 TBC1D31Q96DN5 1066 aa9.59□□□□□ -0.87
SPARC-201ENST00000231061 IL17RAQ96F46 866 aa9.59□□□□□ -0.87
SPARC-201ENST00000231061 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.59□□□□□ -0.87
SPARC-201ENST00000231061 AASDHPPTQ9NRN7 309 aa9.59□□□□□ -0.87
SPARC-201ENST00000231061 KNDC1Q76NI1 1749 aa9.59□□□□□ -0.87
SPARC-201ENST00000231061 CD53P19397 219 aa9.59□□□□□ -0.87
SPARC-201ENST00000231061 DDB1Q16531 1140 aa9.59□□□□□ -0.87
SPARC-201ENST00000231061 PAF1Q8N7H5 531 aa9.59□□□□□ -0.87
SPARC-201ENST00000231061 TBK1Q9UHD2 729 aa9.59□□□□□ -0.87
SPARC-201ENST00000231061 BICDL2A1A5D9 508 aa9.59□□□□□ -0.87
SPARC-201ENST00000231061 MTA2O94776 668 aa9.59□□□□□ -0.87
SPARC-201ENST00000231061 PYGBP11216 843 aa9.59□□□□□ -0.87
SPARC-201ENST00000231061 KLHL40Q2TBA0 621 aa9.59□□□□□ -0.87
SPARC-201ENST00000231061 JADE2Q9NQC1 790 aa9.59□□□□□ -0.87
SPARC-201ENST00000231061 SETD1AO15047 1707 aaKnown RBP9.59□□□□□ -0.87
SPARC-201ENST00000231061 REREQ9P2R6 1566 aa9.58□□□□□ -0.88
SPARC-201ENST00000231061 CLCN2P51788 898 aa9.58□□□□□ -0.88
SPARC-201ENST00000231061 NEK4P51957 841 aa9.58□□□□□ -0.88
SPARC-201ENST00000231061 PDE1AP54750 535 aa9.58□□□□□ -0.88
SPARC-201ENST00000231061 COBLL1Q53SF7 1204 aa9.58□□□□□ -0.88
SPARC-201ENST00000231061 SYT10Q6XYQ8 523 aa9.58□□□□□ -0.88
SPARC-201ENST00000231061 NLGN1Q8N2Q7 840 aa9.58□□□□□ -0.88
SPARC-201ENST00000231061 FAM163AQ96GL9 167 aaPredicted RBP9.58□□□□□ -0.88
SPARC-201ENST00000231061 NRXN3Q9Y4C0 1643 aa9.58□□□□□ -0.88
SPARC-201ENST00000231061 TMEM2Q9UHN6 1383 aa9.58□□□□□ -0.88
SPARC-201ENST00000231061 PRPF40AO75400 957 aaKnown RBP9.58□□□□□ -0.88
SPARC-201ENST00000231061 ZNF189O75820 626 aaPredicted RBP9.58□□□□□ -0.88
SPARC-201ENST00000231061 IMPDH2P12268 514 aa9.58□□□□□ -0.88
SPARC-201ENST00000231061 CLIP3Q96DZ5 547 aa9.58□□□□□ -0.88
SPARC-201ENST00000231061 SPATS2LQ9NUQ6 558 aaKnown RBP9.58□□□□□ -0.88
SPARC-201ENST00000231061 CHMP3Q9Y3E7 222 aa9.58□□□□□ -0.88
SPARC-201ENST00000231061 ITSN1Q15811 1721 aa9.58□□□□□ -0.88
SPARC-201ENST00000231061 MYL1P05976 194 aa9.58□□□□□ -0.88
SPARC-201ENST00000231061 RANBP1P43487 201 aa9.58□□□□□ -0.88
SPARC-201ENST00000231061 CLK1P49759 484 aaKnown RBP9.58□□□□□ -0.88
SPARC-201ENST00000231061 GUCY1B3Q02153 619 aa9.58□□□□□ -0.88
SPARC-201ENST00000231061 PDCD2Q16342 344 aaPredicted RBP9.58□□□□□ -0.88
SPARC-201ENST00000231061 CAPS2Q9BXY5 557 aa9.58□□□□□ -0.88
SPARC-201ENST00000231061 ANO2Q9NQ90 1003 aa9.58□□□□□ -0.88
SPARC-201ENST00000231061 COMMD8Q9NX08 183 aa9.58□□□□□ -0.88
SPARC-201ENST00000231061 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.58□□□□□ -0.88
SPARC-201ENST00000231061 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.58□□□□□ -0.88
SPARC-201ENST00000231061 USP6P35125 1406 aa9.58□□□□□ -0.88
SPARC-201ENST00000231061 RDXP35241 583 aaKnown RBP9.57□□□□□ -0.88
SPARC-201ENST00000231061 TBC1D8BQ0IIM8 1120 aa9.57□□□□□ -0.88
SPARC-201ENST00000231061 NEK10Q6ZWH5 1172 aa9.57□□□□□ -0.88
SPARC-201ENST00000231061 SNX32Q86XE0 403 aa9.57□□□□□ -0.88
SPARC-201ENST00000231061 LMNTD2Q8IXW0 634 aa9.57□□□□□ -0.88
SPARC-201ENST00000231061 DHX36Q9H2U1 1008 aaKnown RBP9.57□□□□□ -0.88
SPARC-201ENST00000231061 IFT122Q9HBG6 1241 aa9.57□□□□□ -0.88
SPARC-201ENST00000231061 MON2Q7Z3U7 1717 aa9.57□□□□□ -0.88
SPARC-201ENST00000231061 DIP2BQ9P265 1576 aa9.57□□□□□ -0.88
SPARC-201ENST00000231061 OVOS2A0A0J9YW53 1432 aa9.57□□□□□ -0.88
SPARC-201ENST00000231061 TECPR2O15040 1411 aa9.57□□□□□ -0.88
SPARC-201ENST00000231061 OVOS2Q6IE36 1432 aa9.57□□□□□ -0.88
SPARC-201ENST00000231061 EIF3FO00303 357 aaPredicted RBP9.57□□□□□ -0.88
SPARC-201ENST00000231061 SPTLC2O15270 562 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms