RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 CLEC11AQ9Y240 323 aa13.02□□□□□ -0.33
LAMA4-201ENST00000230538 PTPRKQ15262 1439 aa13.01□□□□□ -0.33
LAMA4-201ENST00000230538 LDHBP07195 334 aaKnown RBP13.01□□□□□ -0.33
LAMA4-201ENST00000230538 DCAF17Q5H9S7 520 aaPredicted RBP13.01□□□□□ -0.33
LAMA4-201ENST00000230538 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.01□□□□□ -0.33
LAMA4-201ENST00000230538 CCDC114Q96M63 670 aa13.01□□□□□ -0.33
LAMA4-201ENST00000230538 TXNDC16Q9P2K2 825 aa13.01□□□□□ -0.33
LAMA4-201ENST00000230538 RHOXF2BP0C7M4 288 aa13.01□□□□□ -0.33
LAMA4-201ENST00000230538 MAP7D1Q3KQU3 841 aa13.01□□□□□ -0.33
LAMA4-201ENST00000230538 TPTE2Q6XPS3 522 aa13.01□□□□□ -0.33
LAMA4-201ENST00000230538 RHOXF2Q9BQY4 288 aa13.01□□□□□ -0.33
LAMA4-201ENST00000230538 VPS18Q9P253 973 aa13.01□□□□□ -0.33
LAMA4-201ENST00000230538 NPHP3Q7Z494 1330 aa13.01□□□□□ -0.33
LAMA4-201ENST00000230538 CAPN2P17655 700 aa13.01□□□□□ -0.33
LAMA4-201ENST00000230538 DDB1Q16531 1140 aa13.01□□□□□ -0.33
LAMA4-201ENST00000230538 CCDC25Q86WR0 208 aa13.01□□□□□ -0.33
LAMA4-201ENST00000230538 NFATC2IPQ8NCF5 419 aa13.01□□□□□ -0.33
LAMA4-201ENST00000230538 PPP1R9BQ96SB3 815 aa13.01□□□□□ -0.33
LAMA4-201ENST00000230538 USP26Q9BXU7 913 aa13.01□□□□□ -0.33
LAMA4-201ENST00000230538 MTRF1LQ9UGC7 380 aaKnown RBP13.01□□□□□ -0.33
LAMA4-201ENST00000230538 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.01□□□□□ -0.33
LAMA4-201ENST00000230538 RAPGEF1Q13905 1077 aa13.01□□□□□ -0.33
LAMA4-201ENST00000230538 IQUBQ8NA54 791 aa13.01□□□□□ -0.33
LAMA4-201ENST00000230538 ANKRD2Q9GZV1 360 aa13.01□□□□□ -0.33
LAMA4-201ENST00000230538 DCTPP1Q9H773 170 aa13.01□□□□□ -0.33
LAMA4-201ENST00000230538 RIMBP2O15034 1052 aa13.01□□□□□ -0.33
LAMA4-201ENST00000230538 PARP1P09874 1014 aaKnown RBP13.01□□□□□ -0.33
LAMA4-201ENST00000230538 CHMLP26374 656 aa13.01□□□□□ -0.33
LAMA4-201ENST00000230538 LUC7L2Q9Y383 392 aaKnown RBP13.01□□□□□ -0.33
LAMA4-201ENST00000230538 MAP3K5Q99683 1374 aa13□□□□□ -0.33
LAMA4-201ENST00000230538 POLR3AO14802 1390 aaPredicted RBP13□□□□□ -0.33
LAMA4-201ENST00000230538 ANAPC4Q9UJX5 808 aa13□□□□□ -0.33
LAMA4-201ENST00000230538 IL2RBP14784 551 aa13□□□□□ -0.33
LAMA4-201ENST00000230538 CPA1P15085 419 aa13□□□□□ -0.33
LAMA4-201ENST00000230538 TNNC1P63316 161 aa13□□□□□ -0.33
LAMA4-201ENST00000230538 GRM1Q13255 1194 aa13□□□□□ -0.33
LAMA4-201ENST00000230538 RBM26Q5T8P6 1007 aaKnown RBP13□□□□□ -0.33
LAMA4-201ENST00000230538 NAP1L4Q99733 375 aaKnown RBP13□□□□□ -0.33
LAMA4-201ENST00000230538 ZKSCAN3Q9BRR0 538 aa13□□□□□ -0.33
LAMA4-201ENST00000230538 MAK16Q9BXY0 300 aaKnown RBP13□□□□□ -0.33
LAMA4-201ENST00000230538 KCNK9Q9NPC2 374 aa13□□□□□ -0.33
LAMA4-201ENST00000230538 CTNND2Q9UQB3 1225 aa13□□□□□ -0.33
LAMA4-201ENST00000230538 CTTNBP2Q8WZ74 1663 aa13□□□□□ -0.33
LAMA4-201ENST00000230538 RAD50Q92878 1312 aa13□□□□□ -0.33
LAMA4-201ENST00000230538 CCDC160A6NGH7 325 aa13□□□□□ -0.33
LAMA4-201ENST00000230538 VAMP4O75379 141 aa13□□□□□ -0.33
LAMA4-201ENST00000230538 CFAP57Q96MR6 1250 aa13□□□□□ -0.33
LAMA4-201ENST00000230538 URB2Q14146 1524 aaKnown RBP13□□□□□ -0.33
LAMA4-201ENST00000230538 SV2BQ7L1I2 683 aa13□□□□□ -0.33
LAMA4-201ENST00000230538 CCDC65Q8IXS2 484 aa13□□□□□ -0.33
LAMA4-201ENST00000230538 POLKQ9UBT6 870 aa13□□□□□ -0.33
LAMA4-201ENST00000230538 NSFL1CQ9UNZ2 370 aaKnown RBP13□□□□□ -0.33
LAMA4-201ENST00000230538 FAM169AQ9Y6X4 670 aa13□□□□□ -0.33
LAMA4-201ENST00000230538 ELP1O95163 1332 aa12.99□□□□□ -0.33
LAMA4-201ENST00000230538 RPL13P26373 211 aaKnown RBP12.99□□□□□ -0.33
LAMA4-201ENST00000230538 VAV2P52735 878 aa12.99□□□□□ -0.33
LAMA4-201ENST00000230538 SEL1L2Q5TEA6 688 aa12.99□□□□□ -0.33
LAMA4-201ENST00000230538 KIAA1524Q8TCG1 905 aa12.99□□□□□ -0.33
LAMA4-201ENST00000230538 MTUS1Q9ULD2 1270 aa12.99□□□□□ -0.33
LAMA4-201ENST00000230538 FRMD4BQ9Y2L6 1034 aa12.99□□□□□ -0.33
LAMA4-201ENST00000230538 RTCBQ9Y3I0 505 aaKnown RBP12.99□□□□□ -0.33
LAMA4-201ENST00000230538 DAAM2Q86T65 1068 aa12.99□□□□□ -0.33
LAMA4-201ENST00000230538 MICALL1Q8N3F8 863 aa12.99□□□□□ -0.33
LAMA4-201ENST00000230538 PARP3Q9Y6F1 533 aa12.99□□□□□ -0.33
LAMA4-201ENST00000230538 VWA3AA6NCI4 1184 aa12.99□□□□□ -0.33
LAMA4-201ENST00000230538 CCDC14Q49A88 953 aa12.99□□□□□ -0.33
LAMA4-201ENST00000230538 CFAP58Q5T655 872 aa12.99□□□□□ -0.33
LAMA4-201ENST00000230538 CPLX4Q7Z7G2 160 aa12.99□□□□□ -0.33
LAMA4-201ENST00000230538 NBPF11Q86T75 865 aa12.99□□□□□ -0.33
LAMA4-201ENST00000230538 CNGA4Q8IV77 575 aa12.99□□□□□ -0.33
LAMA4-201ENST00000230538 ZBTB40Q9NUA8 1239 aa12.99□□□□□ -0.33
LAMA4-201ENST00000230538 NUP160Q12769 1436 aa12.99□□□□□ -0.33
LAMA4-201ENST00000230538 ZEB2O60315 1214 aa12.99□□□□□ -0.33
LAMA4-201ENST00000230538 ZNF174Q15697 407 aa12.99□□□□□ -0.33
LAMA4-201ENST00000230538 HELLSQ9NRZ9 838 aa12.99□□□□□ -0.33
LAMA4-201ENST00000230538 TLDC2A0PJX2 215 aa12.99□□□□□ -0.33
LAMA4-201ENST00000230538 SP4Q02446 784 aa12.99□□□□□ -0.33
LAMA4-201ENST00000230538 JAKMIP2Q96AA8 810 aa12.99□□□□□ -0.33
LAMA4-201ENST00000230538 WDR7Q9Y4E6 1490 aa12.99□□□□□ -0.33
LAMA4-201ENST00000230538 AKR1B15C9JRZ8 316 aaPredicted RBP12.98□□□□□ -0.33
LAMA4-201ENST00000230538 BACH1O14867 736 aa12.98□□□□□ -0.33
LAMA4-201ENST00000230538 KRT5P13647 590 aa12.98□□□□□ -0.33
LAMA4-201ENST00000230538 DNAJC21Q5F1R6 531 aaKnown RBP12.98□□□□□ -0.33
LAMA4-201ENST00000230538 JAG2Q9Y219 1238 aa12.98□□□□□ -0.33
LAMA4-201ENST00000230538 EPB41P11171 864 aaKnown RBP12.98□□□□□ -0.33
LAMA4-201ENST00000230538 FMNL3Q8IVF7 1028 aa12.98□□□□□ -0.33
LAMA4-201ENST00000230538 UBLCP1Q8WVY7 318 aaPredicted RBP12.98□□□□□ -0.33
LAMA4-201ENST00000230538 ODF2LQ9ULJ1 636 aa12.98□□□□□ -0.33
LAMA4-201ENST00000230538 INTS4Q96HW7 963 aaKnown RBP12.98□□□□□ -0.33
LAMA4-201ENST00000230538 FLT4P35916 1363 aa12.98□□□□□ -0.33
LAMA4-201ENST00000230538 CCT6AP40227 531 aaKnown RBP12.98□□□□□ -0.33
LAMA4-201ENST00000230538 CALCOCO2Q13137 446 aa12.98□□□□□ -0.33
LAMA4-201ENST00000230538 C8orf37Q96NL8 207 aa12.98□□□□□ -0.33
LAMA4-201ENST00000230538 PLCH2O75038 1416 aa12.98□□□□□ -0.33
LAMA4-201ENST00000230538 A0A1B0GVL5 298 aa12.98□□□□□ -0.33
LAMA4-201ENST00000230538 EYA3Q99504 573 aa12.98□□□□□ -0.33
LAMA4-201ENST00000230538 BAG1Q99933 345 aaPredicted RBP12.98□□□□□ -0.33
LAMA4-201ENST00000230538 SAP30BPQ9UHR5 308 aaKnown RBP12.98□□□□□ -0.33
LAMA4-201ENST00000230538 RIMS2Q9UQ26 1411 aa12.98□□□□□ -0.33
LAMA4-201ENST00000230538 MBD4O95243 580 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms