RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 ARMC9Q7Z3E5 817 aa17.68■□□□□ 0.42
GPN3-201ENST00000228827 FTSJ3Q8IY81 847 aaKnown RBP17.68■□□□□ 0.42
GPN3-201ENST00000228827 ANGEL1Q9UNK9 670 aaKnown RBP17.68■□□□□ 0.42
GPN3-201ENST00000228827 COL1A1P02452 1464 aaPredicted RBP17.67■□□□□ 0.42
GPN3-201ENST00000228827 CA12O43570 354 aa17.67■□□□□ 0.42
GPN3-201ENST00000228827 MKRN3Q13064 507 aaKnown RBP17.67■□□□□ 0.42
GPN3-201ENST00000228827 MTX1Q13505 466 aa17.67■□□□□ 0.42
GPN3-201ENST00000228827 RASA3Q14644 834 aa17.67■□□□□ 0.42
GPN3-201ENST00000228827 SPDYE2Q495Y8 402 aa17.67■□□□□ 0.42
GPN3-201ENST00000228827 PPP2R3BQ9Y5P8 575 aa17.67■□□□□ 0.42
GPN3-201ENST00000228827 TCP10L2B9ZVM9 353 aa17.66■□□□□ 0.42
GPN3-201ENST00000228827 ADORA1P30542 326 aa17.66■□□□□ 0.42
GPN3-201ENST00000228827 NBPF12Q5TAG4 269 aaPredicted RBP17.66■□□□□ 0.42
GPN3-201ENST00000228827 CSRNP1Q96S65 589 aa17.66■□□□□ 0.42
GPN3-201ENST00000228827 PNMA6EA0A0J9YXQ4 647 aa17.65■□□□□ 0.42
GPN3-201ENST00000228827 PHKA1P46020 1223 aa17.65■□□□□ 0.42
GPN3-201ENST00000228827 TFCP2Q12800 502 aa17.65■□□□□ 0.42
GPN3-201ENST00000228827 ITPRIPQ8IWB1 547 aa17.65■□□□□ 0.42
GPN3-201ENST00000228827 TEKT1Q969V4 418 aa17.65■□□□□ 0.42
GPN3-201ENST00000228827 GNL3LQ9NVN8 582 aaKnown RBP17.65■□□□□ 0.42
GPN3-201ENST00000228827 RLBP1P12271 317 aa17.64■□□□□ 0.41
GPN3-201ENST00000228827 TIMM10P62072 90 aa17.64■□□□□ 0.41
GPN3-201ENST00000228827 SUPT20HL1Q3ZLR7 823 aa17.64■□□□□ 0.41
GPN3-201ENST00000228827 WDR66Q8TBY9 1149 aa17.64■□□□□ 0.41
GPN3-201ENST00000228827 SSC5DA1L4H1 1573 aa17.64■□□□□ 0.41
GPN3-201ENST00000228827 TRPA1O75762 1119 aa17.63■□□□□ 0.41
GPN3-201ENST00000228827 CACNB3P54284 484 aa17.63■□□□□ 0.41
GPN3-201ENST00000228827 HDLBPQ00341 1268 aaKnown RBP17.63■□□□□ 0.41
GPN3-201ENST00000228827 TNFAIP1Q13829 316 aa17.63■□□□□ 0.41
GPN3-201ENST00000228827 C1orf115Q9H7X2 142 aa17.63■□□□□ 0.41
GPN3-201ENST00000228827 RNF186Q9NXI6 227 aa17.63■□□□□ 0.41
GPN3-201ENST00000228827 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.63■□□□□ 0.41
GPN3-201ENST00000228827 ARAP2Q8WZ64 1704 aa17.63■□□□□ 0.41
GPN3-201ENST00000228827 MAST3O60307 1309 aa17.63■□□□□ 0.41
GPN3-201ENST00000228827 A0A1B0GUL7 405 aa17.63■□□□□ 0.41
GPN3-201ENST00000228827 PPP1R12BO60237 982 aaPredicted RBP17.63■□□□□ 0.41
GPN3-201ENST00000228827 LDLRAD1Q5T700 205 aa17.63■□□□□ 0.41
GPN3-201ENST00000228827 CCDC102BQ68D86 513 aa17.63■□□□□ 0.41
GPN3-201ENST00000228827 CDAN1Q8IWY9 1227 aa17.63■□□□□ 0.41
GPN3-201ENST00000228827 TMEM39BQ9GZU3 492 aa17.63■□□□□ 0.41
GPN3-201ENST00000228827 SUGT1Q9Y2Z0 365 aa17.63■□□□□ 0.41
GPN3-201ENST00000228827 ZDHHC15Q96MV8 337 aa17.62■□□□□ 0.41
GPN3-201ENST00000228827 NEUROD6Q96NK8 337 aa17.62■□□□□ 0.41
GPN3-201ENST00000228827 DENND2AQ9ULE3 1009 aa17.62■□□□□ 0.41
GPN3-201ENST00000228827 AKAP2Q9Y2D5 859 aa17.62■□□□□ 0.41
GPN3-201ENST00000228827 PRDX5P30044 214 aa17.61■□□□□ 0.41
GPN3-201ENST00000228827 TNNI2P48788 182 aa17.61■□□□□ 0.41
GPN3-201ENST00000228827 G3BP1Q13283 466 aaKnown RBP eCLIP17.61■□□□□ 0.41
GPN3-201ENST00000228827 APOBEC3HQ6NTF7 200 aaKnown RBP17.61■□□□□ 0.41
GPN3-201ENST00000228827 SLC10A4Q96EP9 437 aa17.61■□□□□ 0.41
GPN3-201ENST00000228827 XAGE2Q96GT9 111 aa17.61■□□□□ 0.41
GPN3-201ENST00000228827 CLMNQ96JQ2 1002 aa17.61■□□□□ 0.41
GPN3-201ENST00000228827 SAGE1Q9NXZ1 904 aa17.61■□□□□ 0.41
GPN3-201ENST00000228827 TMOD2Q9NZR1 351 aa17.61■□□□□ 0.41
GPN3-201ENST00000228827 USP2O75604 605 aaPredicted RBP17.6■□□□□ 0.41
GPN3-201ENST00000228827 IREB2P48200 963 aaKnown RBP17.6■□□□□ 0.41
GPN3-201ENST00000228827 DIXDC1Q155Q3 683 aa17.6■□□□□ 0.41
GPN3-201ENST00000228827 MAP3K11Q16584 847 aa17.6■□□□□ 0.41
GPN3-201ENST00000228827 PANK1Q8TE04 598 aa17.6■□□□□ 0.41
GPN3-201ENST00000228827 TEPSINQ96N21 525 aa17.6■□□□□ 0.41
GPN3-201ENST00000228827 MRIQ9BWK5 157 aa17.6■□□□□ 0.41
GPN3-201ENST00000228827 SEMA3EO15041 775 aa17.59■□□□□ 0.41
GPN3-201ENST00000228827 LDHBP07195 334 aaKnown RBP17.59■□□□□ 0.41
GPN3-201ENST00000228827 RASGRF1Q13972 1273 aa17.59■□□□□ 0.41
GPN3-201ENST00000228827 HHIPL2Q6UWX4 724 aa17.59■□□□□ 0.41
GPN3-201ENST00000228827 REM2Q8IYK8 340 aaPredicted RBP17.59■□□□□ 0.41
GPN3-201ENST00000228827 ZBTB7BO15156 539 aaPredicted RBP17.58■□□□□ 0.41
GPN3-201ENST00000228827 ATP8B2P98198 1209 aa17.58■□□□□ 0.41
GPN3-201ENST00000228827 POLA2Q14181 598 aa17.58■□□□□ 0.41
GPN3-201ENST00000228827 MVPQ14764 893 aaKnown RBP17.58■□□□□ 0.41
GPN3-201ENST00000228827 SPRYD7Q5W111 196 aa17.58■□□□□ 0.41
GPN3-201ENST00000228827 DAGLAQ9Y4D2 1042 aa17.58■□□□□ 0.41
GPN3-201ENST00000228827 ECM29Q5VYK3 1845 aa17.57■□□□□ 0.4
GPN3-201ENST00000228827 OS9Q13438 667 aaPredicted RBP17.57■□□□□ 0.4
GPN3-201ENST00000228827 GORABQ5T7V8 394 aa17.57■□□□□ 0.4
GPN3-201ENST00000228827 SALL1Q9NSC2 1324 aa17.57■□□□□ 0.4
GPN3-201ENST00000228827 SSH3Q8TE77 659 aa17.56■□□□□ 0.4
GPN3-201ENST00000228827 WNK4Q96J92 1243 aa17.56■□□□□ 0.4
GPN3-201ENST00000228827 ABCF2Q9UG63 623 aa17.56■□□□□ 0.4
GPN3-201ENST00000228827 SURF6O75683 361 aaKnown RBP17.56■□□□□ 0.4
GPN3-201ENST00000228827 TBC1D8O95759 1140 aa17.56■□□□□ 0.4
GPN3-201ENST00000228827 TM4SF4P48230 202 aa17.56■□□□□ 0.4
GPN3-201ENST00000228827 SREBF2Q12772 1141 aa17.56■□□□□ 0.4
GPN3-201ENST00000228827 ANKRD13AQ8IZ07 590 aa17.56■□□□□ 0.4
GPN3-201ENST00000228827 ZGPATQ8N5A5 531 aaKnown RBP17.56■□□□□ 0.4
GPN3-201ENST00000228827 ABHD8Q96I13 439 aa17.56■□□□□ 0.4
GPN3-201ENST00000228827 ELP3Q9H9T3 547 aa17.56■□□□□ 0.4
GPN3-201ENST00000228827 CDC42EP5Q6NZY7 148 aa17.55■□□□□ 0.4
GPN3-201ENST00000228827 PI16Q6UXB8 463 aa17.55■□□□□ 0.4
GPN3-201ENST00000228827 DZIP1Q86YF9 867 aaKnown RBP17.55■□□□□ 0.4
GPN3-201ENST00000228827 USP40Q9NVE5 1235 aa17.55■□□□□ 0.4
GPN3-201ENST00000228827 UNCXA6NJT0 531 aa17.54■□□□□ 0.4
GPN3-201ENST00000228827 GJA5P36382 358 aa17.54■□□□□ 0.4
GPN3-201ENST00000228827 TCP10Q12799 353 aa17.54■□□□□ 0.4
GPN3-201ENST00000228827 DGKZQ13574 1117 aa17.54■□□□□ 0.4
GPN3-201ENST00000228827 FAM83AQ86UY5 434 aa17.54■□□□□ 0.4
GPN3-201ENST00000228827 MCOLN1Q9GZU1 580 aa17.54■□□□□ 0.4
GPN3-201ENST00000228827 ZBTB48P10074 688 aaPredicted RBP17.53■□□□□ 0.4
GPN3-201ENST00000228827 NFIAQ12857 509 aa17.53■□□□□ 0.4
GPN3-201ENST00000228827 FKBP1CQ5VVH2 108 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms