RNA–Protein interactions for RNA: ENST00000228140.6

RPS13-201, Transcript of ribosomal protein S13, humanhuman

TSL 2 BASIC

Gene RPS13, Length 491 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS13-201ENST00000228140 TMOD2Q9NZR1 351 aa13.04□□□□□ -0.32
RPS13-201ENST00000228140 CEP126Q9P2H0 1117 aa13.04□□□□□ -0.32
RPS13-201ENST00000228140 IQSEC3Q9UPP2 1182 aaPredicted RBP13.04□□□□□ -0.32
RPS13-201ENST00000228140 LRRFIP2Q9Y608 721 aaKnown RBP13.04□□□□□ -0.32
RPS13-201ENST00000228140 ZBTB48P10074 688 aaPredicted RBP13.03□□□□□ -0.32
RPS13-201ENST00000228140 BCAMP50895 628 aa13.03□□□□□ -0.32
RPS13-201ENST00000228140 DGKZQ13574 1117 aa13.03□□□□□ -0.32
RPS13-201ENST00000228140 RASA3Q14644 834 aa13.03□□□□□ -0.32
RPS13-201ENST00000228140 ATP2B3Q16720 1220 aa13.03□□□□□ -0.32
RPS13-201ENST00000228140 DZIP1LQ8IYY4 767 aaKnown RBP13.03□□□□□ -0.32
RPS13-201ENST00000228140 WDR66Q8TBY9 1149 aa13.03□□□□□ -0.32
RPS13-201ENST00000228140 GNL3LQ9NVN8 582 aaKnown RBP13.03□□□□□ -0.32
RPS13-201ENST00000228140 ZNF70Q9UC06 446 aaPredicted RBP13.03□□□□□ -0.32
RPS13-201ENST00000228140 PCDHAC2Q9Y5I4 1007 aa13.03□□□□□ -0.32
RPS13-201ENST00000228140 AK9Q5TCS8 1911 aa13.02□□□□□ -0.32
RPS13-201ENST00000228140 ALDH1A1P00352 501 aa13.02□□□□□ -0.33
RPS13-201ENST00000228140 TM4SF4P48230 202 aa13.02□□□□□ -0.33
RPS13-201ENST00000228140 INHBEP58166 350 aa13.02□□□□□ -0.33
RPS13-201ENST00000228140 DIEXFQ68CQ4 756 aaKnown RBP13.02□□□□□ -0.33
RPS13-201ENST00000228140 ATG9AQ7Z3C6 839 aa13.02□□□□□ -0.33
RPS13-201ENST00000228140 HOOK2Q96ED9 719 aa13.02□□□□□ -0.33
RPS13-201ENST00000228140 SLC10A4Q96EP9 437 aa13.02□□□□□ -0.33
RPS13-201ENST00000228140 MRIQ9BWK5 157 aa13.02□□□□□ -0.33
RPS13-201ENST00000228140 MCOLN1Q9GZU1 580 aa13.02□□□□□ -0.33
RPS13-201ENST00000228140 SIL1Q9H173 461 aa13.02□□□□□ -0.33
RPS13-201ENST00000228140 TDRD3Q9H7E2 651 aaKnown RBP13.02□□□□□ -0.33
RPS13-201ENST00000228140 COPRSQ9NQ92 184 aa13.02□□□□□ -0.33
RPS13-201ENST00000228140 MANSC4A6NHS7 340 aaPredicted RBP13.01□□□□□ -0.33
RPS13-201ENST00000228140 SEMA3EO15041 775 aa13.01□□□□□ -0.33
RPS13-201ENST00000228140 HNRNPUQ00839 825 aaKnown RBP eCLIP13.01□□□□□ -0.33
RPS13-201ENST00000228140 NBPF12Q5TAG4 269 aaPredicted RBP13.01□□□□□ -0.33
RPS13-201ENST00000228140 SPRYD7Q5W111 196 aa13.01□□□□□ -0.33
RPS13-201ENST00000228140 ATF7IPQ6VMQ6 1270 aa13.01□□□□□ -0.33
RPS13-201ENST00000228140 ANKRD13AQ8IZ07 590 aa13.01□□□□□ -0.33
RPS13-201ENST00000228140 ZDHHC15Q96MV8 337 aa13.01□□□□□ -0.33
RPS13-201ENST00000228140 MEIS3Q99687 375 aa13.01□□□□□ -0.33
RPS13-201ENST00000228140 MYH2Q9UKX2 1941 aa13.01□□□□□ -0.33
RPS13-201ENST00000228140 DOCK2Q92608 1830 aa13□□□□□ -0.33
RPS13-201ENST00000228140 CCDC85CA6NKD9 419 aa13□□□□□ -0.33
RPS13-201ENST00000228140 SRGAP3O43295 1099 aa13□□□□□ -0.33
RPS13-201ENST00000228140 MTX1Q13505 466 aa13□□□□□ -0.33
RPS13-201ENST00000228140 NOM1Q5C9Z4 860 aaKnown RBP13□□□□□ -0.33
RPS13-201ENST00000228140 FKBP1CQ5VVH2 108 aa13□□□□□ -0.33
RPS13-201ENST00000228140 HHIPL2Q6UWX4 724 aa13□□□□□ -0.33
RPS13-201ENST00000228140 FRAT1Q92837 279 aaPredicted RBP13□□□□□ -0.33
RPS13-201ENST00000228140 CFHR5Q9BXR6 569 aa13□□□□□ -0.33
RPS13-201ENST00000228140 RPAP1Q9BWH6 1393 aaPredicted RBP12.99□□□□□ -0.33
RPS13-201ENST00000228140 AOX1Q06278 1338 aa12.99□□□□□ -0.33
RPS13-201ENST00000228140 TCP10L2B9ZVM9 353 aa12.99□□□□□ -0.33
RPS13-201ENST00000228140 ZBTB22O15209 634 aa12.99□□□□□ -0.33
RPS13-201ENST00000228140 TRIM27P14373 513 aa12.99□□□□□ -0.33
RPS13-201ENST00000228140 MKRN3Q13064 507 aaKnown RBP12.99□□□□□ -0.33
RPS13-201ENST00000228140 ZKSCAN2Q63HK3 967 aa12.99□□□□□ -0.33
RPS13-201ENST00000228140 CTU1Q7Z7A3 348 aaKnown RBP12.99□□□□□ -0.33
RPS13-201ENST00000228140 FAM83AQ86UY5 434 aa12.99□□□□□ -0.33
RPS13-201ENST00000228140 ZGPATQ8N5A5 531 aaKnown RBP12.99□□□□□ -0.33
RPS13-201ENST00000228140 WNK4Q96J92 1243 aa12.99□□□□□ -0.33
RPS13-201ENST00000228140 DENND2AQ9ULE3 1009 aa12.99□□□□□ -0.33
RPS13-201ENST00000228140 AKAP2Q9Y2D5 859 aa12.99□□□□□ -0.33
RPS13-201ENST00000228140 SALL1Q9NSC2 1324 aa12.98□□□□□ -0.33
RPS13-201ENST00000228140 USP2O75604 605 aaPredicted RBP12.98□□□□□ -0.33
RPS13-201ENST00000228140 GNAI2P04899 355 aa12.98□□□□□ -0.33
RPS13-201ENST00000228140 GRIK5Q16478 980 aa12.98□□□□□ -0.33
RPS13-201ENST00000228140 OTUD7BQ6GQQ9 843 aa12.98□□□□□ -0.33
RPS13-201ENST00000228140 FZD1Q9UP38 647 aa12.98□□□□□ -0.33
RPS13-201ENST00000228140 PDS5AQ29RF7 1337 aaKnown RBP12.97□□□□□ -0.33
RPS13-201ENST00000228140 TBC1D8O95759 1140 aa12.97□□□□□ -0.33
RPS13-201ENST00000228140 LDHBP07195 334 aaKnown RBP12.97□□□□□ -0.33
RPS13-201ENST00000228140 PKN2Q16513 984 aaKnown RBP12.97□□□□□ -0.33
RPS13-201ENST00000228140 DCAF15Q66K64 600 aa12.97□□□□□ -0.33
RPS13-201ENST00000228140 MIER1Q8N108 512 aa12.97□□□□□ -0.33
RPS13-201ENST00000228140 CLMNQ96JQ2 1002 aa12.97□□□□□ -0.33
RPS13-201ENST00000228140 TEPSINQ96N21 525 aa12.97□□□□□ -0.33
RPS13-201ENST00000228140 TMEM39BQ9GZU3 492 aa12.97□□□□□ -0.33
RPS13-201ENST00000228140 PA2G4Q9UQ80 394 aaKnown RBP12.97□□□□□ -0.33
RPS13-201ENST00000228140 CSADQ9Y600 493 aa12.97□□□□□ -0.33
RPS13-201ENST00000228140 BCAR3O75815 825 aa12.96□□□□□ -0.33
RPS13-201ENST00000228140 MVPQ14764 893 aaKnown RBP12.96□□□□□ -0.33
RPS13-201ENST00000228140 FTSJ3Q8IY81 847 aaKnown RBP12.96□□□□□ -0.33
RPS13-201ENST00000228140 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.96□□□□□ -0.33
RPS13-201ENST00000228140 MAST2Q6P0Q8 1798 aa12.96□□□□□ -0.34
RPS13-201ENST00000228140 ZBED9Q6R2W3 1325 aa12.95□□□□□ -0.34
RPS13-201ENST00000228140 GPR25O00155 361 aa12.95□□□□□ -0.34
RPS13-201ENST00000228140 FKTNO75072 461 aa12.95□□□□□ -0.34
RPS13-201ENST00000228140 MAP3K9P80192 1104 aa12.95□□□□□ -0.34
RPS13-201ENST00000228140 SPTY2D1Q68D10 685 aaPredicted RBP12.95□□□□□ -0.34
RPS13-201ENST00000228140 CCDC102BQ68D86 513 aa12.95□□□□□ -0.34
RPS13-201ENST00000228140 APOBEC3HQ6NTF7 200 aaKnown RBP12.95□□□□□ -0.34
RPS13-201ENST00000228140 IFNL1Q8IU54 200 aa12.95□□□□□ -0.34
RPS13-201ENST00000228140 SLF2Q8IX21 1173 aa12.95□□□□□ -0.34
RPS13-201ENST00000228140 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.95□□□□□ -0.341e-7■□□□□ 9.8
RPS13-201ENST00000228140 ZNF296Q8WUU4 475 aaPredicted RBP12.95□□□□□ -0.34
RPS13-201ENST00000228140 CLUAP1Q96AJ1 413 aa12.95□□□□□ -0.34
RPS13-201ENST00000228140 OPTNQ96CV9 577 aa12.95□□□□□ -0.34
RPS13-201ENST00000228140 ELP3Q9H9T3 547 aa12.95□□□□□ -0.34
RPS13-201ENST00000228140 A0A1B0GUL7 405 aa12.94□□□□□ -0.34
RPS13-201ENST00000228140 WDHD1O75717 1129 aaPredicted RBP12.94□□□□□ -0.34
RPS13-201ENST00000228140 PRDX5P30044 214 aa12.94□□□□□ -0.34
RPS13-201ENST00000228140 PHKA1P46020 1223 aa12.94□□□□□ -0.34
RPS13-201ENST00000228140 CACNB3P54284 484 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms