RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 ARMC5Q96C12 935 aa14.73□□□□□ -0.05
FRG1-201ENST00000226798 PTPN18Q99952 460 aa14.73□□□□□ -0.05
FRG1-201ENST00000226798 JAG2Q9Y219 1238 aa14.73□□□□□ -0.05
FRG1-201ENST00000226798 PTPN22Q9Y2R2 807 aa14.73□□□□□ -0.05
FRG1-201ENST00000226798 EPHA10Q5JZY3 1008 aa14.72□□□□□ -0.05
FRG1-201ENST00000226798 BEND3Q5T5X7 828 aa14.72□□□□□ -0.05
FRG1-201ENST00000226798 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.72□□□□□ -0.05
FRG1-201ENST00000226798 VAMP4O75379 141 aa14.71□□□□□ -0.05
FRG1-201ENST00000226798 OTUD7BQ6GQQ9 843 aa14.71□□□□□ -0.05
FRG1-201ENST00000226798 LMBR1LQ6UX01 489 aa14.71□□□□□ -0.05
FRG1-201ENST00000226798 ZNF594Q96JF6 807 aaPredicted RBP14.71□□□□□ -0.05
FRG1-201ENST00000226798 MS4A4AQ96JQ5 239 aa14.71□□□□□ -0.05
FRG1-201ENST00000226798 TEPSINQ96N21 525 aa14.71□□□□□ -0.05
FRG1-201ENST00000226798 CHMP3Q9Y3E7 222 aa14.71□□□□□ -0.05
FRG1-201ENST00000226798 F6X3S4 739 aa14.7□□□□□ -0.06
FRG1-201ENST00000226798 RBM5P52756 815 aaKnown RBP eCLIP14.7□□□□□ -0.06
FRG1-201ENST00000226798 SP3Q02447 781 aa14.7□□□□□ -0.06
FRG1-201ENST00000226798 TNFAIP1Q13829 316 aa14.7□□□□□ -0.06
FRG1-201ENST00000226798 CDAN1Q8IWY9 1227 aa14.7□□□□□ -0.06
FRG1-201ENST00000226798 TDRD7Q8NHU6 1098 aaKnown RBP14.7□□□□□ -0.06
FRG1-201ENST00000226798 OPTNQ96CV9 577 aa14.7□□□□□ -0.06
FRG1-201ENST00000226798 EFCC1Q9HA90 598 aa14.7□□□□□ -0.06
FRG1-201ENST00000226798 ZNF70Q9UC06 446 aaPredicted RBP14.7□□□□□ -0.06
FRG1-201ENST00000226798 SERPINA10Q9UK55 444 aa14.7□□□□□ -0.06
FRG1-201ENST00000226798 FARP1Q9Y4F1 1045 aaPredicted RBP14.7□□□□□ -0.06
FRG1-201ENST00000226798 ZSWIM8A7E2V4 1837 aa14.7□□□□□ -0.06
FRG1-201ENST00000226798 GRM8O00222 908 aa14.69□□□□□ -0.06
FRG1-201ENST00000226798 CCDC57Q2TAC2 916 aa14.69□□□□□ -0.06
FRG1-201ENST00000226798 HABP4Q5JVS0 413 aaKnown RBP14.69□□□□□ -0.06
FRG1-201ENST00000226798 MFSD14BQ5SR56 506 aa14.69□□□□□ -0.06
FRG1-201ENST00000226798 LDHAL6AQ6ZMR3 332 aa14.69□□□□□ -0.06
FRG1-201ENST00000226798 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.69□□□□□ -0.06
FRG1-201ENST00000226798 ELP3Q9H9T3 547 aa14.69□□□□□ -0.06
FRG1-201ENST00000226798 TTF2Q9UNY4 1162 aaKnown RBP14.69□□□□□ -0.06
FRG1-201ENST00000226798 UBE4AQ14139 1066 aa14.68□□□□□ -0.06
FRG1-201ENST00000226798 BRI3BPQ8WY22 251 aa14.68□□□□□ -0.06
FRG1-201ENST00000226798 ZNF333Q96JL9 665 aa14.68□□□□□ -0.06
FRG1-201ENST00000226798 TDRD3Q9H7E2 651 aaKnown RBP14.68□□□□□ -0.06
FRG1-201ENST00000226798 CNNM1Q9NRU3 951 aa14.68□□□□□ -0.06
FRG1-201ENST00000226798 TRIOBPQ9H2D6 2365 aa14.67□□□□□ -0.06
FRG1-201ENST00000226798 PLIN1O60240 522 aa14.67□□□□□ -0.06
FRG1-201ENST00000226798 EN2P19622 333 aaPredicted RBP14.67□□□□□ -0.06
FRG1-201ENST00000226798 GYG1P46976 350 aa14.67□□□□□ -0.06
FRG1-201ENST00000226798 CLCN6P51797 869 aa14.67□□□□□ -0.06
FRG1-201ENST00000226798 EXOSC9Q06265 439 aaKnown RBP14.67□□□□□ -0.06
FRG1-201ENST00000226798 VGLL4Q14135 290 aa14.67□□□□□ -0.06
FRG1-201ENST00000226798 TAF7LQ5H9L4 462 aa14.67□□□□□ -0.06
FRG1-201ENST00000226798 DZIP1LQ8IYY4 767 aaKnown RBP14.67□□□□□ -0.06
FRG1-201ENST00000226798 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.67□□□□□ -0.06
FRG1-201ENST00000226798 FAM84BQ96KN1 310 aaPredicted RBP14.67□□□□□ -0.06
FRG1-201ENST00000226798 LAMA3Q16787 3333 aa14.67□□□□□ -0.06
FRG1-201ENST00000226798 CD44P16070 742 aaKnown RBP14.66□□□□□ -0.06
FRG1-201ENST00000226798 HIBADHP31937 336 aaKnown RBP14.66□□□□□ -0.06
FRG1-201ENST00000226798 WDR63Q8IWG1 891 aa14.66□□□□□ -0.06
FRG1-201ENST00000226798 TMEM39BQ9GZU3 492 aa14.66□□□□□ -0.06
FRG1-201ENST00000226798 MYH13Q9UKX3 1938 aa14.66□□□□□ -0.06
FRG1-201ENST00000226798 CCL15-CCL14A0A0B4J2E2 113 aa14.65□□□□□ -0.06
FRG1-201ENST00000226798 CRKP46108 304 aa14.65□□□□□ -0.06
FRG1-201ENST00000226798 GTF2A2P52657 109 aa14.65□□□□□ -0.06
FRG1-201ENST00000226798 TAF1CQ15572 869 aaPredicted RBP14.65□□□□□ -0.06
FRG1-201ENST00000226798 GRIK5Q16478 980 aa14.65□□□□□ -0.06
FRG1-201ENST00000226798 CCL15Q16663 113 aa14.65□□□□□ -0.06
FRG1-201ENST00000226798 KAZALD1Q96I82 304 aa14.65□□□□□ -0.06
FRG1-201ENST00000226798 SPDYE5A6NIY4 337 aa14.64□□□□□ -0.07
FRG1-201ENST00000226798 TCP10L2B9ZVM9 353 aa14.64□□□□□ -0.07
FRG1-201ENST00000226798 ALDH1L1O75891 902 aa14.64□□□□□ -0.07
FRG1-201ENST00000226798 TNNI2P48788 182 aa14.64□□□□□ -0.07
FRG1-201ENST00000226798 MAP3K9P80192 1104 aa14.64□□□□□ -0.07
FRG1-201ENST00000226798 FAM43AQ8N2R8 423 aa14.64□□□□□ -0.07
FRG1-201ENST00000226798 OTUD5Q96G74 571 aa14.64□□□□□ -0.07
FRG1-201ENST00000226798 PUS3Q9BZE2 481 aaKnown RBP14.64□□□□□ -0.07
FRG1-201ENST00000226798 ZFYVE28Q9HCC9 887 aa14.64□□□□□ -0.07
FRG1-201ENST00000226798 C9orf78Q9NZ63 289 aaPredicted RBP14.64□□□□□ -0.07
FRG1-201ENST00000226798 RIPOR2Q9Y4F9 1068 aa14.64□□□□□ -0.07
FRG1-201ENST00000226798 PTCH2Q9Y6C5 1203 aa14.64□□□□□ -0.07
FRG1-201ENST00000226798 A0A0C4DFX4 3053 aa14.64□□□□□ -0.07
FRG1-201ENST00000226798 HDLBPQ00341 1268 aaKnown RBP14.63□□□□□ -0.07
FRG1-201ENST00000226798 SLC9C1Q4G0N8 1177 aa14.63□□□□□ -0.07
FRG1-201ENST00000226798 FBXO33Q7Z6M2 555 aa14.63□□□□□ -0.07
FRG1-201ENST00000226798 SUCLG2Q96I99 432 aa14.63□□□□□ -0.07
FRG1-201ENST00000226798 ZCCHC17Q9NP64 241 aaKnown RBP14.63□□□□□ -0.07
FRG1-201ENST00000226798 CSADQ9Y600 493 aa14.63□□□□□ -0.07
FRG1-201ENST00000226798 SNCAIPQ9Y6H5 919 aa14.63□□□□□ -0.07
FRG1-201ENST00000226798 COL6A3P12111 3177 aa14.63□□□□□ -0.07
FRG1-201ENST00000226798 UTYO14607 1347 aa14.63□□□□□ -0.07
FRG1-201ENST00000226798 MROH5Q6ZUA9 1318 aa14.63□□□□□ -0.07
FRG1-201ENST00000226798 RPAP1Q9BWH6 1393 aaPredicted RBP14.62□□□□□ -0.07
FRG1-201ENST00000226798 FXR1P51114 621 aaKnown RBP eCLIP14.62□□□□□ -0.07
FRG1-201ENST00000226798 ARHGEF6Q15052 776 aa14.62□□□□□ -0.07
FRG1-201ENST00000226798 TMEM106CQ9BVX2 250 aa14.62□□□□□ -0.07
FRG1-201ENST00000226798 SRCIN1Q9C0H9 1055 aa14.62□□□□□ -0.07
FRG1-201ENST00000226798 RABL6Q3YEC7 729 aaPredicted RBP14.61□□□□□ -0.07
FRG1-201ENST00000226798 NBPF11Q86T75 865 aa14.61□□□□□ -0.07
FRG1-201ENST00000226798 VGLL2Q8N8G2 317 aa14.61□□□□□ -0.07
FRG1-201ENST00000226798 TBC1D22AQ8WUA7 517 aa14.61□□□□□ -0.07
FRG1-201ENST00000226798 IQSEC3Q9UPP2 1182 aaPredicted RBP14.61□□□□□ -0.07
FRG1-201ENST00000226798 TLR2O60603 784 aa14.6□□□□□ -0.07
FRG1-201ENST00000226798 NBPF7P0C2Y1 421 aaPredicted RBP14.6□□□□□ -0.07
FRG1-201ENST00000226798 CETPP11597 493 aa14.6□□□□□ -0.07
FRG1-201ENST00000226798 CACNB3P54284 484 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms