RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 FAM170AA1A519 330 aa15.68■□□□□ 0.1
NFKB1-201ENST00000226574 SASH1O94885 1247 aa15.68■□□□□ 0.1
NFKB1-201ENST00000226574 MYSM1Q5VVJ2 828 aa15.68■□□□□ 0.1
NFKB1-201ENST00000226574 YEATS2Q9ULM3 1422 aa15.68■□□□□ 0.1
NFKB1-201ENST00000226574 SPTY2D1Q68D10 685 aaPredicted RBP15.68■□□□□ 0.1
NFKB1-201ENST00000226574 TTLL7Q6ZT98 887 aa15.68■□□□□ 0.1
NFKB1-201ENST00000226574 BRAPQ7Z569 592 aa15.68■□□□□ 0.1
NFKB1-201ENST00000226574 KRI1Q8N9T8 703 aaKnown RBP15.68■□□□□ 0.1
NFKB1-201ENST00000226574 KIF24Q5T7B8 1368 aa15.68■□□□□ 0.1
NFKB1-201ENST00000226574 GOLGA6L9A6NEM1 432 aa15.68■□□□□ 0.1
NFKB1-201ENST00000226574 CTDSPL2Q05D32 466 aa15.68■□□□□ 0.1
NFKB1-201ENST00000226574 CYP2E1P05181 493 aaPredicted RBP15.67■□□□□ 0.1
NFKB1-201ENST00000226574 HSPD1P10809 573 aaKnown RBP15.67■□□□□ 0.1
NFKB1-201ENST00000226574 TTF1Q15361 905 aaPredicted RBP15.67■□□□□ 0.1
NFKB1-201ENST00000226574 PI16Q6UXB8 463 aa15.67■□□□□ 0.1
NFKB1-201ENST00000226574 GOLGA1Q92805 767 aa15.67■□□□□ 0.1
NFKB1-201ENST00000226574 PSMB7Q99436 277 aa15.67■□□□□ 0.1
NFKB1-201ENST00000226574 PUS3Q9BZE2 481 aaKnown RBP15.67■□□□□ 0.1
NFKB1-201ENST00000226574 ABCA8O94911 1581 aa15.67■□□□□ 0.1
NFKB1-201ENST00000226574 ATP2C2O75185 946 aa15.67■□□□□ 0.1
NFKB1-201ENST00000226574 PFKFB1P16118 471 aa15.67■□□□□ 0.1
NFKB1-201ENST00000226574 ATP5JP18859 108 aa15.67■□□□□ 0.1
NFKB1-201ENST00000226574 IFIT1BQ5T764 474 aaKnown RBP15.67■□□□□ 0.1
NFKB1-201ENST00000226574 RNF187Q5TA31 235 aaPredicted RBP15.67■□□□□ 0.1
NFKB1-201ENST00000226574 DZIP1Q86YF9 867 aaKnown RBP15.67■□□□□ 0.1
NFKB1-201ENST00000226574 ARMT1Q9H993 441 aa15.67■□□□□ 0.1
NFKB1-201ENST00000226574 FANCLQ9NW38 375 aa15.67■□□□□ 0.1
NFKB1-201ENST00000226574 IGSF22Q8N9C0 903 aa15.67■□□□□ 0.1
NFKB1-201ENST00000226574 AIFM3Q96NN9 605 aa15.67■□□□□ 0.1
NFKB1-201ENST00000226574 ANGEL1Q9UNK9 670 aaKnown RBP15.67■□□□□ 0.1
NFKB1-201ENST00000226574 KIF20AO95235 890 aa15.66■□□□□ 0.1
NFKB1-201ENST00000226574 PAFAH1B1P43034 410 aa15.66■□□□□ 0.1
NFKB1-201ENST00000226574 NEK11Q8NG66 645 aa15.66■□□□□ 0.1
NFKB1-201ENST00000226574 CTAGE9A4FU28 777 aa15.66■□□□□ 0.1
NFKB1-201ENST00000226574 WDHD1O75717 1129 aaPredicted RBP15.66■□□□□ 0.1
NFKB1-201ENST00000226574 CCDC96Q2M329 555 aa15.66■□□□□ 0.1
NFKB1-201ENST00000226574 KRBA2Q6ZNG9 492 aa15.66■□□□□ 0.1
NFKB1-201ENST00000226574 ACSBG1Q96GR2 724 aa15.66■□□□□ 0.1
NFKB1-201ENST00000226574 UIMC1Q96RL1 719 aa15.66■□□□□ 0.1
NFKB1-201ENST00000226574 CCDC113Q9H0I3 377 aa15.66■□□□□ 0.1
NFKB1-201ENST00000226574 PLEKHA4Q9H4M7 779 aa15.66■□□□□ 0.1
NFKB1-201ENST00000226574 BMP2KQ9NSY1 1161 aaPredicted RBP15.66■□□□□ 0.1
NFKB1-201ENST00000226574 TRPM2O94759 1503 aa15.66■□□□□ 0.1
NFKB1-201ENST00000226574 FAM135BQ49AJ0 1406 aa15.66■□□□□ 0.1
NFKB1-201ENST00000226574 ZSCAN29Q8IWY8 852 aaPredicted RBP15.66■□□□□ 0.1
NFKB1-201ENST00000226574 ZNF444Q8N0Y2 327 aaPredicted RBP15.66■□□□□ 0.1
NFKB1-201ENST00000226574 ELP1O95163 1332 aa15.66■□□□□ 0.1
NFKB1-201ENST00000226574 CDR1P51861 262 aa15.65■□□□□ 0.1
NFKB1-201ENST00000226574 UBXN1Q04323 297 aa15.65■□□□□ 0.1
NFKB1-201ENST00000226574 NECTIN1Q15223 517 aa15.65■□□□□ 0.1
NFKB1-201ENST00000226574 HELLSQ9NRZ9 838 aa15.65■□□□□ 0.1
NFKB1-201ENST00000226574 IRS4O14654 1257 aaPredicted RBP15.65■□□□□ 0.1
NFKB1-201ENST00000226574 FGAP02671 866 aa15.65■□□□□ 0.1
NFKB1-201ENST00000226574 GPATCH11Q8N954 259 aa15.65■□□□□ 0.1
NFKB1-201ENST00000226574 STAT6P42226 847 aa15.65■□□□□ 0.1
NFKB1-201ENST00000226574 MAP9Q49MG5 647 aa15.65■□□□□ 0.1
NFKB1-201ENST00000226574 NAA16Q6N069 864 aaPredicted RBP15.65■□□□□ 0.1
NFKB1-201ENST00000226574 LLPHQ9BRT6 129 aaKnown RBP15.65■□□□□ 0.1
NFKB1-201ENST00000226574 MMRN2Q9H8L6 949 aa15.65■□□□□ 0.1
NFKB1-201ENST00000226574 PTCH1Q13635 1447 aa15.65■□□□□ 0.1
NFKB1-201ENST00000226574 TCERG1LQ5VWI1 586 aa15.64■□□□□ 0.09
NFKB1-201ENST00000226574 KANK3Q6NY19 840 aa15.64■□□□□ 0.09
NFKB1-201ENST00000226574 TAF4BQ92750 862 aa15.64■□□□□ 0.09
NFKB1-201ENST00000226574 ANKIB1Q9P2G1 1089 aa15.64■□□□□ 0.09
NFKB1-201ENST00000226574 V9GY48 417 aaPredicted RBP15.64■□□□□ 0.09
NFKB1-201ENST00000226574 SEC31AO94979 1220 aaKnown RBP15.64■□□□□ 0.09
NFKB1-201ENST00000226574 ATP1A3P13637 1013 aa15.64■□□□□ 0.09
NFKB1-201ENST00000226574 PDIA3P30101 505 aaKnown RBP15.64■□□□□ 0.09
NFKB1-201ENST00000226574 NOP2P46087 812 aaKnown RBP15.64■□□□□ 0.09
NFKB1-201ENST00000226574 RNASE9P60153 205 aaKnown RBP15.64■□□□□ 0.09
NFKB1-201ENST00000226574 ADALQ6DHV7 355 aa15.64■□□□□ 0.09
NFKB1-201ENST00000226574 ESR2Q92731 530 aa15.64■□□□□ 0.09
NFKB1-201ENST00000226574 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.64■□□□□ 0.09
NFKB1-201ENST00000226574 MPHOSPH10O00566 681 aaKnown RBP15.64■□□□□ 0.09
NFKB1-201ENST00000226574 PLCD4Q9BRC7 762 aa15.64■□□□□ 0.09
NFKB1-201ENST00000226574 TCP11L1Q9NUJ3 509 aa15.64■□□□□ 0.09
NFKB1-201ENST00000226574 MACROD2A1Z1Q3 448 aa15.63■□□□□ 0.09
NFKB1-201ENST00000226574 TMCO5BA8MYB1 307 aa15.63■□□□□ 0.09
NFKB1-201ENST00000226574 BTBD18B2RXH4 712 aa15.63■□□□□ 0.09
NFKB1-201ENST00000226574 NLRP12P59046 1061 aa15.63■□□□□ 0.09
NFKB1-201ENST00000226574 PGBD1Q96JS3 809 aa15.63■□□□□ 0.09
NFKB1-201ENST00000226574 SSH2Q76I76 1423 aa15.63■□□□□ 0.09
NFKB1-201ENST00000226574 AKR1B15C9JRZ8 316 aaPredicted RBP15.63■□□□□ 0.09
NFKB1-201ENST00000226574 USO1O60763 962 aaKnown RBP15.63■□□□□ 0.09
NFKB1-201ENST00000226574 CCDC144BQ3MJ40 725 aa15.63■□□□□ 0.09
NFKB1-201ENST00000226574 APPBP2Q92624 585 aa15.63■□□□□ 0.09
NFKB1-201ENST00000226574 LUC7LQ9NQ29 371 aaKnown RBP15.63■□□□□ 0.09
NFKB1-201ENST00000226574 LRRIQ1Q96JM4 1722 aa15.63■□□□□ 0.09
NFKB1-201ENST00000226574 HOXB7P09629 217 aa15.63■□□□□ 0.09
NFKB1-201ENST00000226574 ETF1P62495 437 aaKnown RBP15.63■□□□□ 0.09
NFKB1-201ENST00000226574 PRPF4BQ13523 1007 aaKnown RBP15.63■□□□□ 0.09
NFKB1-201ENST00000226574 SHTN1A0MZ66 631 aa15.63■□□□□ 0.09
NFKB1-201ENST00000226574 ITGA6P23229 1130 aa15.63■□□□□ 0.09
NFKB1-201ENST00000226574 RBM5P52756 815 aaKnown RBP eCLIP15.63■□□□□ 0.09
NFKB1-201ENST00000226574 HEATR3Q7Z4Q2 680 aa15.63■□□□□ 0.09
NFKB1-201ENST00000226574 NSUN7Q8NE18 718 aaKnown RBP15.63■□□□□ 0.09
NFKB1-201ENST00000226574 DCAF5Q96JK2 942 aa15.63■□□□□ 0.09
NFKB1-201ENST00000226574 BLZF1Q9H2G9 400 aa15.63■□□□□ 0.09
NFKB1-201ENST00000226574 SERTAD1Q9UHV2 236 aa15.63■□□□□ 0.09
NFKB1-201ENST00000226574 USP27XA6NNY8 438 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms