RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 TBC1D9Q6ZT07 1266 aa17.98■□□□□ 0.47
PCOLCE-201ENST00000223061 USP48Q86UV5 1035 aa17.98■□□□□ 0.47
PCOLCE-201ENST00000223061 ZGPATQ8N5A5 531 aaKnown RBP17.98■□□□□ 0.47
PCOLCE-201ENST00000223061 ZNF512BQ96KM6 892 aaPredicted RBP17.98■□□□□ 0.47
PCOLCE-201ENST00000223061 SERPINA10Q9UK55 444 aa17.98■□□□□ 0.47
PCOLCE-201ENST00000223061 SCAF8Q9UPN6 1271 aaKnown RBP17.98■□□□□ 0.47
PCOLCE-201ENST00000223061 SPDYE2BA6NHP3 402 aa17.97■□□□□ 0.47
PCOLCE-201ENST00000223061 SPDYE6P0CI01 402 aa17.97■□□□□ 0.47
PCOLCE-201ENST00000223061 FMR1Q06787 632 aaKnown RBP eCLIP17.97■□□□□ 0.47
PCOLCE-201ENST00000223061 KRT26Q7Z3Y9 468 aa17.97■□□□□ 0.47
PCOLCE-201ENST00000223061 MTMR14Q8NCE2 650 aa17.97■□□□□ 0.47
PCOLCE-201ENST00000223061 TEKT1Q969V4 418 aa17.97■□□□□ 0.47
PCOLCE-201ENST00000223061 ZBED3Q96IU2 234 aaPredicted RBP17.97■□□□□ 0.47
PCOLCE-201ENST00000223061 PRMT6Q96LA8 375 aaPredicted RBP17.97■□□□□ 0.47
PCOLCE-201ENST00000223061 RWDD1Q9H446 243 aaPredicted RBP17.97■□□□□ 0.47
PCOLCE-201ENST00000223061 MAST3O60307 1309 aa17.97■□□□□ 0.47
PCOLCE-201ENST00000223061 ADM5C9JUS6 153 aa17.96■□□□□ 0.47
PCOLCE-201ENST00000223061 DLK2Q6UY11 383 aa17.96■□□□□ 0.47
PCOLCE-201ENST00000223061 CDC37L1Q7L3B6 337 aa17.96■□□□□ 0.47
PCOLCE-201ENST00000223061 AOX1Q06278 1338 aa17.96■□□□□ 0.47
PCOLCE-201ENST00000223061 CLRN2A0PK11 232 aa17.95■□□□□ 0.46
PCOLCE-201ENST00000223061 HSPA6P17066 643 aa17.95■□□□□ 0.46
PCOLCE-201ENST00000223061 ZAP70P43403 619 aa17.95■□□□□ 0.46
PCOLCE-201ENST00000223061 DIXDC1Q155Q3 683 aa17.95■□□□□ 0.46
PCOLCE-201ENST00000223061 SPTY2D1Q68D10 685 aaPredicted RBP17.95■□□□□ 0.46
PCOLCE-201ENST00000223061 DZIP1Q86YF9 867 aaKnown RBP17.95■□□□□ 0.46
PCOLCE-201ENST00000223061 SULF1Q8IWU6 871 aa17.95■□□□□ 0.46
PCOLCE-201ENST00000223061 NDUFB9Q9Y6M9 179 aa17.95■□□□□ 0.46
PCOLCE-201ENST00000223061 PASKQ96RG2 1323 aa17.95■□□□□ 0.46
PCOLCE-201ENST00000223061 MYH13Q9UKX3 1938 aa17.95■□□□□ 0.46
PCOLCE-201ENST00000223061 MYO1BO43795 1136 aa17.95■□□□□ 0.46
PCOLCE-201ENST00000223061 IGHDP01880 384 aa17.95■□□□□ 0.46
PCOLCE-201ENST00000223061 HDLBPQ00341 1268 aaKnown RBP17.95■□□□□ 0.46
PCOLCE-201ENST00000223061 ERICH6Q7L0X2 663 aa17.95■□□□□ 0.46
PCOLCE-201ENST00000223061 GCC1Q96CN9 775 aa17.95■□□□□ 0.46
PCOLCE-201ENST00000223061 CYP2E1P05181 493 aaPredicted RBP17.94■□□□□ 0.46
PCOLCE-201ENST00000223061 ANKRD45Q5TZF3 282 aa17.94■□□□□ 0.46
PCOLCE-201ENST00000223061 RAI14Q9P0K7 980 aa17.94■□□□□ 0.46
PCOLCE-201ENST00000223061 LRP2BPQ9P2M1 347 aa17.94■□□□□ 0.46
PCOLCE-201ENST00000223061 ZBTB47Q9UFB7 747 aaPredicted RBP17.94■□□□□ 0.46
PCOLCE-201ENST00000223061 APLP1P51693 650 aa17.93■□□□□ 0.46
PCOLCE-201ENST00000223061 TDRD3Q9H7E2 651 aaKnown RBP17.93■□□□□ 0.46
PCOLCE-201ENST00000223061 VEZTQ9HBM0 779 aa17.93■□□□□ 0.46
PCOLCE-201ENST00000223061 PITPNM2Q9BZ72 1349 aa17.93■□□□□ 0.46
PCOLCE-201ENST00000223061 MECOMQ03112 1051 aa17.92■□□□□ 0.46
PCOLCE-201ENST00000223061 HHIPL2Q6UWX4 724 aa17.92■□□□□ 0.46
PCOLCE-201ENST00000223061 ZDHHC15Q96MV8 337 aa17.92■□□□□ 0.46
PCOLCE-201ENST00000223061 MRIQ9BWK5 157 aa17.92■□□□□ 0.46
PCOLCE-201ENST00000223061 ZNF408Q9H9D4 720 aa17.92■□□□□ 0.46
PCOLCE-201ENST00000223061 PIH1D3Q9NQM4 214 aaKnown RBP17.92■□□□□ 0.46
PCOLCE-201ENST00000223061 HTRA3P83110 453 aa17.92■□□□□ 0.46
PCOLCE-201ENST00000223061 B4GALNT3Q6L9W6 998 aa17.92■□□□□ 0.46
PCOLCE-201ENST00000223061 APOBEC3FQ8IUX4 373 aaKnown RBP17.92■□□□□ 0.46
PCOLCE-201ENST00000223061 DNAJC2Q99543 621 aaKnown RBP17.92■□□□□ 0.46
PCOLCE-201ENST00000223061 DAGLAQ9Y4D2 1042 aa17.92■□□□□ 0.46
PCOLCE-201ENST00000223061 SPDYE2Q495Y8 402 aa17.91■□□□□ 0.46
PCOLCE-201ENST00000223061 TSHZ3Q63HK5 1081 aa17.91■□□□□ 0.46
PCOLCE-201ENST00000223061 APOBEC3HQ6NTF7 200 aaKnown RBP17.91■□□□□ 0.46
PCOLCE-201ENST00000223061 BOLA2Q9H3K6 86 aa17.91■□□□□ 0.46
PCOLCE-201ENST00000223061 ANTXR1Q9H6X2 564 aa17.91■□□□□ 0.46
PCOLCE-201ENST00000223061 ZNF70Q9UC06 446 aaPredicted RBP17.91■□□□□ 0.46
PCOLCE-201ENST00000223061 CELF2O95319 508 aaKnown RBP17.9■□□□□ 0.46
PCOLCE-201ENST00000223061 ATP5JP18859 108 aa17.9■□□□□ 0.46
PCOLCE-201ENST00000223061 PRAMEF18Q5VWM3 479 aa17.9■□□□□ 0.46
PCOLCE-201ENST00000223061 SMC5Q8IY18 1101 aa17.9■□□□□ 0.46
PCOLCE-201ENST00000223061 OTUD7AQ8TE49 926 aaPredicted RBP17.9■□□□□ 0.46
PCOLCE-201ENST00000223061 GPATCH3Q96I76 525 aa17.9■□□□□ 0.46
PCOLCE-201ENST00000223061 ECHDC1Q9NTX5 307 aa17.9■□□□□ 0.46
PCOLCE-201ENST00000223061 IDH1O75874 414 aaKnown RBP17.89■□□□□ 0.46
PCOLCE-201ENST00000223061 CACNB3P54284 484 aa17.89■□□□□ 0.46
PCOLCE-201ENST00000223061 SLF2Q8IX21 1173 aa17.89■□□□□ 0.46
PCOLCE-201ENST00000223061 ZNF384Q8TF68 577 aa17.89■□□□□ 0.46
PCOLCE-201ENST00000223061 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.89■□□□□ 0.46
PCOLCE-201ENST00000223061 NSUN4Q96CB9 384 aaKnown RBP17.89■□□□□ 0.46
PCOLCE-201ENST00000223061 CDCA5Q96FF9 252 aa17.89■□□□□ 0.46
PCOLCE-201ENST00000223061 TMEM88BA6NKF7 163 aa17.89■□□□□ 0.45
PCOLCE-201ENST00000223061 GOLIM4O00461 696 aa17.89■□□□□ 0.45
PCOLCE-201ENST00000223061 GSTO1P78417 241 aa17.89■□□□□ 0.45
PCOLCE-201ENST00000223061 CST9Q5W186 159 aa17.89■□□□□ 0.45
PCOLCE-201ENST00000223061 DEFB129Q9H1M3 183 aa17.89■□□□□ 0.45
PCOLCE-201ENST00000223061 MROH7-TTC4A0A0A0MT08 1334 aa17.88■□□□□ 0.45
PCOLCE-201ENST00000223061 TCP10L2B9ZVM9 353 aa17.88■□□□□ 0.45
PCOLCE-201ENST00000223061 EDC3Q96F86 508 aaKnown RBP17.88■□□□□ 0.45
PCOLCE-201ENST00000223061 LNPKQ9C0E8 428 aa17.88■□□□□ 0.45
PCOLCE-201ENST00000223061 TMOD2Q9NZR1 351 aa17.88■□□□□ 0.45
PCOLCE-201ENST00000223061 GAKO14976 1311 aa17.87■□□□□ 0.45
PCOLCE-201ENST00000223061 NAA16Q6N069 864 aaPredicted RBP17.87■□□□□ 0.45
PCOLCE-201ENST00000223061 CDC42EP5Q6NZY7 148 aa17.87■□□□□ 0.45
PCOLCE-201ENST00000223061 HAUS7Q99871 368 aa17.87■□□□□ 0.45
PCOLCE-201ENST00000223061 CREBZFQ9NS37 354 aa17.87■□□□□ 0.45
PCOLCE-201ENST00000223061 USP40Q9NVE5 1235 aa17.87■□□□□ 0.45
PCOLCE-201ENST00000223061 BTDP43251 543 aa17.86■□□□□ 0.45
PCOLCE-201ENST00000223061 RASA3Q14644 834 aa17.86■□□□□ 0.45
PCOLCE-201ENST00000223061 TTF1Q15361 905 aaPredicted RBP17.86■□□□□ 0.45
PCOLCE-201ENST00000223061 FAM163AQ96GL9 167 aaPredicted RBP17.86■□□□□ 0.45
PCOLCE-201ENST00000223061 PAG1Q9NWQ8 432 aa17.86■□□□□ 0.45
PCOLCE-201ENST00000223061 ABT1Q9ULW3 272 aaKnown RBP17.86■□□□□ 0.45
PCOLCE-201ENST00000223061 AKAP11Q9UKA4 1901 aa17.86■□□□□ 0.45
PCOLCE-201ENST00000223061 NEFLP07196 543 aa17.86■□□□□ 0.45
PCOLCE-201ENST00000223061 LDHCP07864 332 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms