RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 MXD3Q9BW11 206 aa20.12■□□□□ 0.81
LIM2-201ENST00000221973 TLR7Q9NYK1 1049 aaKnown RBP20.12■□□□□ 0.81
LIM2-201ENST00000221973 USP17L8P0C7I0 530 aa20.11■□□□□ 0.81
LIM2-201ENST00000221973 GYG1P46976 350 aa20.11■□□□□ 0.81
LIM2-201ENST00000221973 DACT2Q5SW24 774 aa20.11■□□□□ 0.81
LIM2-201ENST00000221973 ANGEL2Q5VTE6 544 aaKnown RBP20.11■□□□□ 0.81
LIM2-201ENST00000221973 RGMBQ6NW40 437 aa20.11■□□□□ 0.81
LIM2-201ENST00000221973 DBNDD2Q9BQY9 259 aa20.11■□□□□ 0.81
LIM2-201ENST00000221973 MYOZ2Q9NPC6 264 aa20.11■□□□□ 0.81
LIM2-201ENST00000221973 IRS2Q9Y4H2 1338 aa20.1■□□□□ 0.81
LIM2-201ENST00000221973 CA12O43570 354 aa20.1■□□□□ 0.81
LIM2-201ENST00000221973 GORABQ5T7V8 394 aa20.1■□□□□ 0.81
LIM2-201ENST00000221973 SULF1Q8IWU6 871 aa20.1■□□□□ 0.81
LIM2-201ENST00000221973 C2orf69Q8N8R5 385 aa20.1■□□□□ 0.81
LIM2-201ENST00000221973 CDCA5Q96FF9 252 aa20.1■□□□□ 0.81
LIM2-201ENST00000221973 DBNLQ9UJU6 430 aaKnown RBP20.1■□□□□ 0.81
LIM2-201ENST00000221973 A0A1B0GUL6 1792 aa20.09■□□□□ 0.81
LIM2-201ENST00000221973 BCAMP50895 628 aa20.09■□□□□ 0.81
LIM2-201ENST00000221973 CAVIN4Q5BKX8 364 aa20.09■□□□□ 0.81
LIM2-201ENST00000221973 C15orf52Q6ZUT6 534 aaKnown RBP20.09■□□□□ 0.81
LIM2-201ENST00000221973 OTUD7AQ8TE49 926 aaPredicted RBP20.09■□□□□ 0.81
LIM2-201ENST00000221973 FAM84BQ96KN1 310 aaPredicted RBP20.09■□□□□ 0.81
LIM2-201ENST00000221973 CASP8AP2Q9UKL3 1982 aa20.08■□□□□ 0.81
LIM2-201ENST00000221973 HIBADHP31937 336 aaKnown RBP20.08■□□□□ 0.81
LIM2-201ENST00000221973 VPS37DQ86XT2 251 aa20.08■□□□□ 0.81
LIM2-201ENST00000221973 COA1Q9GZY4 146 aa20.08■□□□□ 0.81
LIM2-201ENST00000221973 SCAF8Q9UPN6 1271 aaKnown RBP20.08■□□□□ 0.81
LIM2-201ENST00000221973 PITPNM2Q9BZ72 1349 aa20.07■□□□□ 0.8
LIM2-201ENST00000221973 PHKA1P46020 1223 aa20.07■□□□□ 0.8
LIM2-201ENST00000221973 NBPF9Q3BBW0 867 aa20.07■□□□□ 0.8
LIM2-201ENST00000221973 STRIP1Q5VSL9 837 aa20.07■□□□□ 0.8
LIM2-201ENST00000221973 CCDC102BQ68D86 513 aa20.07■□□□□ 0.8
LIM2-201ENST00000221973 ZNF804AQ7Z570 1209 aa20.07■□□□□ 0.8
LIM2-201ENST00000221973 FBXO33Q7Z6M2 555 aa20.07■□□□□ 0.8
LIM2-201ENST00000221973 ZNF157P51786 506 aaPredicted RBP20.06■□□□□ 0.8
LIM2-201ENST00000221973 KIF23Q02241 960 aaPredicted RBP20.06■□□□□ 0.8
LIM2-201ENST00000221973 CCDC158Q5M9N0 1113 aa20.06■□□□□ 0.8
LIM2-201ENST00000221973 CCDC102AQ96A19 550 aa20.06■□□□□ 0.8
LIM2-201ENST00000221973 SLC10A3P09131 477 aa20.05■□□□□ 0.8
LIM2-201ENST00000221973 PDE4AP27815 886 aa20.05■□□□□ 0.8
LIM2-201ENST00000221973 TTC39AQ5SRH9 613 aa20.05■□□□□ 0.8
LIM2-201ENST00000221973 SKAP1Q86WV1 359 aa20.05■□□□□ 0.8
LIM2-201ENST00000221973 CD209Q9NNX6 404 aa20.05■□□□□ 0.8
LIM2-201ENST00000221973 IQSEC3Q9UPP2 1182 aaPredicted RBP20.05■□□□□ 0.8
LIM2-201ENST00000221973 WNT10BO00744 389 aa20.04■□□□□ 0.8
LIM2-201ENST00000221973 TSHZ3Q63HK5 1081 aa20.04■□□□□ 0.8
LIM2-201ENST00000221973 GPATCH3Q96I76 525 aa20.04■□□□□ 0.8
LIM2-201ENST00000221973 PAPPA2Q9BXP8 1791 aa20.03■□□□□ 0.8
LIM2-201ENST00000221973 FRAT2O75474 233 aaPredicted RBP20.03■□□□□ 0.8
LIM2-201ENST00000221973 PRAMEF18Q5VWM3 479 aa20.03■□□□□ 0.8
LIM2-201ENST00000221973 TTLL5Q6EMB2 1281 aa20.03■□□□□ 0.8
LIM2-201ENST00000221973 MOB2Q70IA6 237 aa20.03■□□□□ 0.8
LIM2-201ENST00000221973 ZBED3Q96IU2 234 aaPredicted RBP20.03■□□□□ 0.8
LIM2-201ENST00000221973 GNL3LQ9NVN8 582 aaKnown RBP20.03■□□□□ 0.8
LIM2-201ENST00000221973 MYO3BQ8WXR4 1341 aa20.02■□□□□ 0.8
LIM2-201ENST00000221973 SALL3Q9BXA9 1300 aa20.02■□□□□ 0.8
LIM2-201ENST00000221973 MX1P20591 662 aa20.02■□□□□ 0.8
LIM2-201ENST00000221973 RASAL3Q86YV0 1011 aa20.02■□□□□ 0.8
LIM2-201ENST00000221973 CSRNP1Q96S65 589 aa20.02■□□□□ 0.8
LIM2-201ENST00000221973 MCOLN1Q9GZU1 580 aa20.02■□□□□ 0.8
LIM2-201ENST00000221973 ECHDC1Q9NTX5 307 aa20.02■□□□□ 0.8
LIM2-201ENST00000221973 UQCRFS1P1P0C7P4 283 aa20.01■□□□□ 0.79
LIM2-201ENST00000221973 IL1R1P14778 569 aa20.01■□□□□ 0.79
LIM2-201ENST00000221973 PDE1AP54750 535 aa20.01■□□□□ 0.79
LIM2-201ENST00000221973 FKBP1BP68106 108 aa20.01■□□□□ 0.79
LIM2-201ENST00000221973 PLEKHM2Q8IWE5 1019 aa20.01■□□□□ 0.79
LIM2-201ENST00000221973 TDRD7Q8NHU6 1098 aaKnown RBP20.01■□□□□ 0.79
LIM2-201ENST00000221973 FBXW7Q969H0 707 aa20.01■□□□□ 0.79
LIM2-201ENST00000221973 RNF186Q9NXI6 227 aa20.01■□□□□ 0.79
LIM2-201ENST00000221973 ARID4AP29374 1257 aaPredicted RBP20■□□□□ 0.79
LIM2-201ENST00000221973 GTF2IP78347 998 aa20■□□□□ 0.79
LIM2-201ENST00000221973 OGFOD1Q8N543 542 aa20■□□□□ 0.79
LIM2-201ENST00000221973 CERS5Q8N5B7 392 aa20■□□□□ 0.79
LIM2-201ENST00000221973 SAGE1Q9NXZ1 904 aa20■□□□□ 0.79
LIM2-201ENST00000221973 JAG2Q9Y219 1238 aa20■□□□□ 0.79
LIM2-201ENST00000221973 TTC41PQ6P2S7 1318 aa20■□□□□ 0.79
LIM2-201ENST00000221973 ARAP2Q8WZ64 1704 aa19.99■□□□□ 0.79
LIM2-201ENST00000221973 ATP5JP18859 108 aa19.99■□□□□ 0.79
LIM2-201ENST00000221973 MCAMP43121 646 aa19.99■□□□□ 0.79
LIM2-201ENST00000221973 CHAF1AQ13111 956 aaPredicted RBP19.99■□□□□ 0.79
LIM2-201ENST00000221973 RASGRF1Q13972 1273 aa19.99■□□□□ 0.79
LIM2-201ENST00000221973 KIAA0825Q8IV33 1275 aa19.99■□□□□ 0.79
LIM2-201ENST00000221973 ZNF512BQ96KM6 892 aaPredicted RBP19.99■□□□□ 0.79
LIM2-201ENST00000221973 BOLA2Q9H3K6 86 aa19.99■□□□□ 0.79
LIM2-201ENST00000221973 SNRKQ9NRH2 765 aa19.99■□□□□ 0.79
LIM2-201ENST00000221973 STAP2Q9UGK3 403 aa19.99■□□□□ 0.79
LIM2-201ENST00000221973 UBE2Q2LH0YL09 131 aa19.98■□□□□ 0.79
LIM2-201ENST00000221973 TRPA1O75762 1119 aa19.98■□□□□ 0.79
LIM2-201ENST00000221973 RGS3P49796 1198 aa19.98■□□□□ 0.79
LIM2-201ENST00000221973 MMP14P50281 582 aa19.98■□□□□ 0.79
LIM2-201ENST00000221973 PI16Q6UXB8 463 aa19.98■□□□□ 0.79
LIM2-201ENST00000221973 PI4K2BQ8TCG2 481 aa19.98■□□□□ 0.79
LIM2-201ENST00000221973 HMG20BQ9P0W2 317 aa19.98■□□□□ 0.79
LIM2-201ENST00000221973 DENND2AQ9ULE3 1009 aa19.98■□□□□ 0.79
LIM2-201ENST00000221973 AKAP11Q9UKA4 1901 aa19.98■□□□□ 0.79
LIM2-201ENST00000221973 CCDC85CA6NKD9 419 aa19.97■□□□□ 0.79
LIM2-201ENST00000221973 SEMA3EO15041 775 aa19.97■□□□□ 0.79
LIM2-201ENST00000221973 ERC2O15083 957 aa19.97■□□□□ 0.79
LIM2-201ENST00000221973 SPATA5Q8NB90 893 aa19.97■□□□□ 0.79
LIM2-201ENST00000221973 NDUFB9Q9Y6M9 179 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms