RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 BOLA2Q9H3K6 86 aa18.52■□□□□ 0.56
SF3A2-201ENST00000221494 TBC1D2BQ9UPU7 963 aa18.52■□□□□ 0.56
SF3A2-201ENST00000221494 SH3TC1Q8TE82 1336 aa18.52■□□□□ 0.56
SF3A2-201ENST00000221494 GTF2E1P29083 439 aaPredicted RBP18.51■□□□□ 0.55
SF3A2-201ENST00000221494 LINC00116Q8NCU8 138 aa18.51■□□□□ 0.55
SF3A2-201ENST00000221494 CCDC8Q9H0W5 538 aaPredicted RBP18.51■□□□□ 0.55
SF3A2-201ENST00000221494 COPRSQ9NQ92 184 aa18.51■□□□□ 0.55
SF3A2-201ENST00000221494 CICQ96RK0 1608 aaPredicted RBP18.51■□□□□ 0.55
SF3A2-201ENST00000221494 H2AFXP16104 143 aaPredicted RBP18.51■□□□□ 0.55
SF3A2-201ENST00000221494 TPM4P67936 248 aa18.51■□□□□ 0.55
SF3A2-201ENST00000221494 STK3Q13188 491 aa18.51■□□□□ 0.55
SF3A2-201ENST00000221494 BMS1Q14692 1282 aaKnown RBP18.51■□□□□ 0.55
SF3A2-201ENST00000221494 FBXL16Q8N461 479 aa18.51■□□□□ 0.55
SF3A2-201ENST00000221494 NSUN7Q8NE18 718 aaKnown RBP18.51■□□□□ 0.55
SF3A2-201ENST00000221494 ZNF592Q92610 1267 aa18.51■□□□□ 0.55
SF3A2-201ENST00000221494 ZFP91Q96JP5 570 aaPredicted RBP18.51■□□□□ 0.55
SF3A2-201ENST00000221494 KCNQ4P56696 695 aa18.5■□□□□ 0.55
SF3A2-201ENST00000221494 FOXO4P98177 505 aa18.5■□□□□ 0.55
SF3A2-201ENST00000221494 MCMDC2Q4G0Z9 681 aa18.5■□□□□ 0.55
SF3A2-201ENST00000221494 ZNF772Q68DY9 489 aaPredicted RBP18.5■□□□□ 0.55
SF3A2-201ENST00000221494 DHX32Q7L7V1 743 aaKnown RBP18.5■□□□□ 0.55
SF3A2-201ENST00000221494 SALL1Q9NSC2 1324 aa18.5■□□□□ 0.55
SF3A2-201ENST00000221494 USP27XA6NNY8 438 aa18.5■□□□□ 0.55
SF3A2-201ENST00000221494 SCRN1Q12765 414 aa18.5■□□□□ 0.55
SF3A2-201ENST00000221494 HSP90AB3PQ58FF7 597 aa18.5■□□□□ 0.55
SF3A2-201ENST00000221494 TCEANC2Q96MN5 208 aa18.5■□□□□ 0.55
SF3A2-201ENST00000221494 TAF6LQ9Y6J9 622 aa18.5■□□□□ 0.55
SF3A2-201ENST00000221494 ZNF609O15014 1411 aa18.49■□□□□ 0.55
SF3A2-201ENST00000221494 ADALQ6DHV7 355 aa18.49■□□□□ 0.55
SF3A2-201ENST00000221494 FBXO38Q6PIJ6 1188 aa18.49■□□□□ 0.55
SF3A2-201ENST00000221494 MRPS27Q92552 414 aaKnown RBP18.49■□□□□ 0.55
SF3A2-201ENST00000221494 SRRTQ9BXP5 876 aaKnown RBP18.49■□□□□ 0.55
SF3A2-201ENST00000221494 TLR7Q9NYK1 1049 aaKnown RBP18.49■□□□□ 0.55
SF3A2-201ENST00000221494 MYO1BO43795 1136 aa18.48■□□□□ 0.55
SF3A2-201ENST00000221494 RFX5P48382 616 aaPredicted RBP18.48■□□□□ 0.55
SF3A2-201ENST00000221494 COL9A3Q14050 684 aaPredicted RBP18.48■□□□□ 0.55
SF3A2-201ENST00000221494 CCDC93Q567U6 631 aa18.48■□□□□ 0.55
SF3A2-201ENST00000221494 NLRP10Q86W26 655 aa18.48■□□□□ 0.55
SF3A2-201ENST00000221494 ZNF274Q96GC6 653 aaPredicted RBP18.48■□□□□ 0.55
SF3A2-201ENST00000221494 DSCC1Q9BVC3 393 aa18.48■□□□□ 0.55
SF3A2-201ENST00000221494 GOLPH3LQ9H4A5 285 aa18.48■□□□□ 0.55
SF3A2-201ENST00000221494 RTEL1Q9NZ71 1219 aa18.48■□□□□ 0.55
SF3A2-201ENST00000221494 NHSQ6T4R5 1651 aa18.48■□□□□ 0.55
SF3A2-201ENST00000221494 KRT27Q7Z3Y8 459 aa18.48■□□□□ 0.55
SF3A2-201ENST00000221494 FMR1NBQ8N0W7 255 aaPredicted RBP18.48■□□□□ 0.55
SF3A2-201ENST00000221494 FSIP1Q8NA03 581 aa18.48■□□□□ 0.55
SF3A2-201ENST00000221494 HAUS7Q99871 368 aa18.48■□□□□ 0.55
SF3A2-201ENST00000221494 PHLPP2Q6ZVD8 1323 aa18.47■□□□□ 0.55
SF3A2-201ENST00000221494 ZNF831Q5JPB2 1677 aa18.47■□□□□ 0.55
SF3A2-201ENST00000221494 ATP8B1O43520 1251 aa18.47■□□□□ 0.55
SF3A2-201ENST00000221494 CAMTA2O94983 1202 aa18.47■□□□□ 0.55
SF3A2-201ENST00000221494 PCCAP05165 728 aaPredicted RBP18.47■□□□□ 0.55
SF3A2-201ENST00000221494 CYP21A2P08686 494 aa18.47■□□□□ 0.55
SF3A2-201ENST00000221494 GPTP24298 496 aa18.47■□□□□ 0.55
SF3A2-201ENST00000221494 NAA30Q147X3 362 aaPredicted RBP18.47■□□□□ 0.55
SF3A2-201ENST00000221494 LMBR1LQ6UX01 489 aa18.47■□□□□ 0.55
SF3A2-201ENST00000221494 ZBTB38Q8NAP3 1195 aaPredicted RBP18.47■□□□□ 0.55
SF3A2-201ENST00000221494 HELLSQ9NRZ9 838 aa18.47■□□□□ 0.55
SF3A2-201ENST00000221494 CALCOCO1Q9P1Z2 691 aa18.47■□□□□ 0.55
SF3A2-201ENST00000221494 RREB1Q92766 1687 aa18.47■□□□□ 0.55
SF3A2-201ENST00000221494 PTPDC1A2A3K4 754 aa18.46■□□□□ 0.55
SF3A2-201ENST00000221494 YEATS4O95619 227 aa18.46■□□□□ 0.55
SF3A2-201ENST00000221494 TPM1P09493 284 aa18.46■□□□□ 0.55
SF3A2-201ENST00000221494 ELF2Q15723 593 aa18.46■□□□□ 0.55
SF3A2-201ENST00000221494 FAM196AQ6ZSG2 479 aa18.46■□□□□ 0.55
SF3A2-201ENST00000221494 FILIP1Q7Z7B0 1213 aa18.46■□□□□ 0.55
SF3A2-201ENST00000221494 ZNF34Q8IZ26 560 aa18.46■□□□□ 0.55
SF3A2-201ENST00000221494 USP28Q96RU2 1077 aa18.46■□□□□ 0.55
SF3A2-201ENST00000221494 CNTNAP4Q9C0A0 1308 aa18.46■□□□□ 0.55
SF3A2-201ENST00000221494 AFDNP55196 1824 aaKnown RBP18.46■□□□□ 0.55
SF3A2-201ENST00000221494 EVCP57679 992 aa18.46■□□□□ 0.55
SF3A2-201ENST00000221494 EXOSC10Q01780 885 aaKnown RBP18.46■□□□□ 0.55
SF3A2-201ENST00000221494 ZRSR1Q15695 479 aaKnown RBP18.46■□□□□ 0.55
SF3A2-201ENST00000221494 TNNI3KQ59H18 835 aa18.46■□□□□ 0.55
SF3A2-201ENST00000221494 RC3H1Q5TC82 1133 aaKnown RBP18.46■□□□□ 0.55
SF3A2-201ENST00000221494 NBPF11Q86T75 865 aa18.46■□□□□ 0.55
SF3A2-201ENST00000221494 FCHSD1Q86WN1 690 aa18.46■□□□□ 0.55
SF3A2-201ENST00000221494 AOPEPQ8N6M6 819 aa18.46■□□□□ 0.55
SF3A2-201ENST00000221494 KLHDC4Q8TBB5 520 aa18.46■□□□□ 0.55
SF3A2-201ENST00000221494 KCNG4Q8TDN1 519 aa18.46■□□□□ 0.55
SF3A2-201ENST00000221494 FAM89AQ96GI7 184 aa18.46■□□□□ 0.55
SF3A2-201ENST00000221494 CCNL1Q9UK58 526 aaPredicted RBP18.46■□□□□ 0.55
SF3A2-201ENST00000221494 FPGT-TNNI3KV9GXZ4 949 aa18.46■□□□□ 0.55
SF3A2-201ENST00000221494 DTNBO60941 627 aa18.45■□□□□ 0.54
SF3A2-201ENST00000221494 SFPQP23246 707 aaKnown RBP eCLIP18.45■□□□□ 0.54
SF3A2-201ENST00000221494 PTPN12Q05209 780 aaKnown RBP18.45■□□□□ 0.54
SF3A2-201ENST00000221494 ARID5BQ14865 1188 aa18.45■□□□□ 0.54
SF3A2-201ENST00000221494 PPP1R13BQ96KQ4 1090 aa18.45■□□□□ 0.54
SF3A2-201ENST00000221494 ARGLU1Q9NWB6 273 aaPredicted RBP18.45■□□□□ 0.54
SF3A2-201ENST00000221494 DDX60Q8IY21 1712 aaKnown RBP18.45■□□□□ 0.54
SF3A2-201ENST00000221494 IKBKBO14920 756 aa18.44■□□□□ 0.54
SF3A2-201ENST00000221494 E4F1Q66K89 784 aaPredicted RBP18.44■□□□□ 0.54
SF3A2-201ENST00000221494 KIAA1468Q9P260 1216 aa18.44■□□□□ 0.54
SF3A2-201ENST00000221494 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.44■□□□□ 0.54
SF3A2-201ENST00000221494 BTAF1O14981 1849 aa18.44■□□□□ 0.54
SF3A2-201ENST00000221494 CTDNEP1O95476 244 aa18.44■□□□□ 0.54
SF3A2-201ENST00000221494 ME1P48163 572 aa18.44■□□□□ 0.54
SF3A2-201ENST00000221494 UBN2Q6ZU65 1347 aa18.44■□□□□ 0.54
SF3A2-201ENST00000221494 KBTBD3Q8NAB2 608 aa18.44■□□□□ 0.54
SF3A2-201ENST00000221494 DDX11Q96FC9 970 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms