RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 GIGYF2Q6Y7W6 1299 aaKnown RBP14.23□□□□□ -0.13
TM9SF4-201ENST00000217315 SYNE4Q8N205 404 aa14.23□□□□□ -0.13
TM9SF4-201ENST00000217315 TMTC2Q8N394 836 aa14.23□□□□□ -0.13
TM9SF4-201ENST00000217315 USP42Q9H9J4 1324 aaKnown RBP14.23□□□□□ -0.13
TM9SF4-201ENST00000217315 IFIT1BQ5T764 474 aaKnown RBP14.23□□□□□ -0.13
TM9SF4-201ENST00000217315 BRINP3Q76B58 766 aa14.23□□□□□ -0.13
TM9SF4-201ENST00000217315 NBPF5PQ86XG9 351 aaPredicted RBP14.23□□□□□ -0.13
TM9SF4-201ENST00000217315 TMEM87AQ8NBN3 555 aa14.23□□□□□ -0.13
TM9SF4-201ENST00000217315 TSC1Q92574 1164 aa14.23□□□□□ -0.13
TM9SF4-201ENST00000217315 PRDM10Q9NQV6 1147 aa14.23□□□□□ -0.13
TM9SF4-201ENST00000217315 TRIM34Q9BYJ4 488 aa14.22□□□□□ -0.13
TM9SF4-201ENST00000217315 MAGEB6P1A0A0J9YX57 407 aa14.22□□□□□ -0.13
TM9SF4-201ENST00000217315 URI1O94763 535 aaPredicted RBP14.22□□□□□ -0.13
TM9SF4-201ENST00000217315 AFMP43652 599 aa14.22□□□□□ -0.13
TM9SF4-201ENST00000217315 LRMPQ12912 555 aa14.22□□□□□ -0.13
TM9SF4-201ENST00000217315 MAP3K15Q6ZN16 1313 aa14.22□□□□□ -0.13
TM9SF4-201ENST00000217315 PXDNLA1KZ92 1463 aa14.22□□□□□ -0.13
TM9SF4-201ENST00000217315 PRDM1O75626 825 aa14.22□□□□□ -0.13
TM9SF4-201ENST00000217315 CIAO1O76071 339 aa14.22□□□□□ -0.13
TM9SF4-201ENST00000217315 PDE6AP16499 860 aa14.22□□□□□ -0.13
TM9SF4-201ENST00000217315 SPECC1Q5M775 1068 aa14.22□□□□□ -0.13
TM9SF4-201ENST00000217315 MYSM1Q5VVJ2 828 aa14.22□□□□□ -0.13
TM9SF4-201ENST00000217315 KRT40Q6A162 431 aa14.22□□□□□ -0.13
TM9SF4-201ENST00000217315 SAMD1Q6SPF0 538 aaPredicted RBP14.22□□□□□ -0.13
TM9SF4-201ENST00000217315 SPATA5Q8NB90 893 aa14.22□□□□□ -0.13
TM9SF4-201ENST00000217315 TMEM87BQ96K49 555 aa14.22□□□□□ -0.13
TM9SF4-201ENST00000217315 ELP1O95163 1332 aa14.21□□□□□ -0.13
TM9SF4-201ENST00000217315 PUS7LQ9H0K6 701 aaKnown RBP14.21□□□□□ -0.13
TM9SF4-201ENST00000217315 TMX1Q9H3N1 280 aa14.21□□□□□ -0.13
TM9SF4-201ENST00000217315 MRVI1Q9Y6F6 885 aa14.21□□□□□ -0.13
TM9SF4-201ENST00000217315 ZNF202O95125 648 aa14.21□□□□□ -0.13
TM9SF4-201ENST00000217315 SNW1Q13573 536 aaKnown RBP14.21□□□□□ -0.13
TM9SF4-201ENST00000217315 PIGBQ92521 554 aa14.21□□□□□ -0.13
TM9SF4-201ENST00000217315 KIF2AO00139 706 aaPredicted RBP14.21□□□□□ -0.14
TM9SF4-201ENST00000217315 NLRP3Q96P20 1036 aa14.21□□□□□ -0.14
TM9SF4-201ENST00000217315 PDE8BO95263 885 aa14.2□□□□□ -0.14
TM9SF4-201ENST00000217315 GNAT2P19087 354 aa14.2□□□□□ -0.14
TM9SF4-201ENST00000217315 PPP4R3BQ5MIZ7 849 aa14.2□□□□□ -0.14
TM9SF4-201ENST00000217315 SOGA3Q5TF21 947 aa14.2□□□□□ -0.14
TM9SF4-201ENST00000217315 RPAP1Q9BWH6 1393 aaPredicted RBP14.2□□□□□ -0.14
TM9SF4-201ENST00000217315 SPDYE4A6NLX3 237 aa14.2□□□□□ -0.14
TM9SF4-201ENST00000217315 ZNF444Q8N0Y2 327 aaPredicted RBP14.2□□□□□ -0.14
TM9SF4-201ENST00000217315 UBXN4Q92575 508 aa14.2□□□□□ -0.14
TM9SF4-201ENST00000217315 MAGEC2Q9UBF1 373 aaPredicted RBP14.2□□□□□ -0.14
TM9SF4-201ENST00000217315 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.2□□□□□ -0.14
TM9SF4-201ENST00000217315 V9GYY5 206 aaPredicted RBP14.2□□□□□ -0.14
TM9SF4-201ENST00000217315 C1orf167Q5SNV9 1468 aa14.2□□□□□ -0.14
TM9SF4-201ENST00000217315 CCDC24Q8N4L8 307 aa14.2□□□□□ -0.14
TM9SF4-201ENST00000217315 PDLIM2Q96JY6 352 aa14.2□□□□□ -0.14
TM9SF4-201ENST00000217315 PCDHA7Q9UN72 937 aa14.2□□□□□ -0.14
TM9SF4-201ENST00000217315 STX8Q9UNK0 236 aa14.2□□□□□ -0.14
TM9SF4-201ENST00000217315 FBXO18Q8NFZ0 1043 aa14.19□□□□□ -0.14
TM9SF4-201ENST00000217315 CDK5RAP3Q96JB5 506 aa14.19□□□□□ -0.14
TM9SF4-201ENST00000217315 SETDB2Q96T68 719 aa14.19□□□□□ -0.14
TM9SF4-201ENST00000217315 RESTQ13127 1097 aa14.19□□□□□ -0.14
TM9SF4-201ENST00000217315 DIS3L2Q8IYB7 885 aaKnown RBP14.19□□□□□ -0.14
TM9SF4-201ENST00000217315 CRNKL1Q9BZJ0 848 aaKnown RBP14.19□□□□□ -0.14
TM9SF4-201ENST00000217315 CCDC87Q9NVE4 849 aa14.19□□□□□ -0.14
TM9SF4-201ENST00000217315 ANKRD26Q9UPS8 1709 aa14.19□□□□□ -0.14
TM9SF4-201ENST00000217315 RABL6Q3YEC7 729 aaPredicted RBP14.19□□□□□ -0.14
TM9SF4-201ENST00000217315 NLRP10Q86W26 655 aa14.19□□□□□ -0.14
TM9SF4-201ENST00000217315 DHX58Q96C10 678 aa14.19□□□□□ -0.14
TM9SF4-201ENST00000217315 FBXO3Q9UK99 471 aa14.19□□□□□ -0.14
TM9SF4-201ENST00000217315 KCNJ14Q9UNX9 436 aa14.19□□□□□ -0.14
TM9SF4-201ENST00000217315 TRIM75PA6NK02 468 aa14.19□□□□□ -0.14
TM9SF4-201ENST00000217315 SNAP23O00161 211 aa14.19□□□□□ -0.14
TM9SF4-201ENST00000217315 FOXO4P98177 505 aa14.19□□□□□ -0.14
TM9SF4-201ENST00000217315 PDE4BQ07343 736 aa14.19□□□□□ -0.14
TM9SF4-201ENST00000217315 IKQ13123 557 aaPredicted RBP14.19□□□□□ -0.14
TM9SF4-201ENST00000217315 HLFQ16534 295 aa14.19□□□□□ -0.14
TM9SF4-201ENST00000217315 ADALQ6DHV7 355 aa14.19□□□□□ -0.14
TM9SF4-201ENST00000217315 CMTR1Q8N1G2 835 aaKnown RBP14.19□□□□□ -0.14
TM9SF4-201ENST00000217315 CCDC150Q8NCX0 1101 aa14.19□□□□□ -0.14
TM9SF4-201ENST00000217315 CABP5Q9NP86 173 aa14.19□□□□□ -0.14
TM9SF4-201ENST00000217315 PAXBP1Q9Y5B6 917 aa14.19□□□□□ -0.14
TM9SF4-201ENST00000217315 CCDC194A0A1B0GVG4 234 aa14.18□□□□□ -0.14
TM9SF4-201ENST00000217315 BCAMP50895 628 aa14.18□□□□□ -0.14
TM9SF4-201ENST00000217315 STIM1Q13586 685 aa14.18□□□□□ -0.14
TM9SF4-201ENST00000217315 KRI1Q8N9T8 703 aaKnown RBP14.18□□□□□ -0.14
TM9SF4-201ENST00000217315 ATG3Q9NT62 314 aa14.18□□□□□ -0.14
TM9SF4-201ENST00000217315 GJB4Q9NTQ9 266 aa14.18□□□□□ -0.14
TM9SF4-201ENST00000217315 NRBP1Q9UHY1 535 aa14.18□□□□□ -0.14
TM9SF4-201ENST00000217315 PYCARDQ9ULZ3 195 aa14.18□□□□□ -0.14
TM9SF4-201ENST00000217315 CLIC4Q9Y696 253 aa14.18□□□□□ -0.14
TM9SF4-201ENST00000217315 hCG_1642624A0A1W2PR95 340 aa14.18□□□□□ -0.14
TM9SF4-201ENST00000217315 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.18□□□□□ -0.14
TM9SF4-201ENST00000217315 CLSTN1O94985 981 aa14.18□□□□□ -0.14
TM9SF4-201ENST00000217315 YEATS4O95619 227 aa14.18□□□□□ -0.14
TM9SF4-201ENST00000217315 PARP10Q53GL7 1025 aa14.18□□□□□ -0.14
TM9SF4-201ENST00000217315 SMARCC1Q92922 1105 aaPredicted RBP14.18□□□□□ -0.14
TM9SF4-201ENST00000217315 A0A0U1RQG5 324 aaPredicted RBP14.17□□□□□ -0.14
TM9SF4-201ENST00000217315 ZSCAN12O43309 604 aa14.17□□□□□ -0.14
TM9SF4-201ENST00000217315 KAT14Q9H8E8 782 aa14.17□□□□□ -0.14
TM9SF4-201ENST00000217315 MROH5Q6ZUA9 1318 aa14.17□□□□□ -0.14
TM9SF4-201ENST00000217315 CARMIL3Q8ND23 1372 aa14.17□□□□□ -0.14
TM9SF4-201ENST00000217315 RIOK3O14730 519 aaKnown RBP14.17□□□□□ -0.14
TM9SF4-201ENST00000217315 NDUFA8P51970 172 aa14.17□□□□□ -0.14
TM9SF4-201ENST00000217315 ATG9AQ7Z3C6 839 aa14.17□□□□□ -0.14
TM9SF4-201ENST00000217315 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.17□□□□□ -0.14
TM9SF4-201ENST00000217315 VAT1LQ9HCJ6 419 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms