RNA–Protein interactions for RNA: ENST00000217244.7

CSNK2A1-201, Transcript of casein kinase 2 alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK2A1, Length 4,416 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-201ENST00000217244 TRAPPC3LQ5T215 181 aa9.97□□□□□ -0.81
CSNK2A1-201ENST00000217244 ATG9AQ7Z3C6 839 aa9.97□□□□□ -0.81
CSNK2A1-201ENST00000217244 USP28Q96RU2 1077 aa9.97□□□□□ -0.81
CSNK2A1-201ENST00000217244 CNNM3Q8NE01 707 aa9.97□□□□□ -0.81
CSNK2A1-201ENST00000217244 SSH2Q76I76 1423 aa9.97□□□□□ -0.81
CSNK2A1-201ENST00000217244 NR1I2O75469 434 aa9.97□□□□□ -0.81
CSNK2A1-201ENST00000217244 LMOD1P29536 600 aaPredicted RBP9.97□□□□□ -0.81
CSNK2A1-201ENST00000217244 DYNLL1P63167 89 aaKnown RBP9.97□□□□□ -0.81
CSNK2A1-201ENST00000217244 CUL4AQ13619 759 aa9.97□□□□□ -0.81
CSNK2A1-201ENST00000217244 CNBD1Q8NA66 436 aa9.97□□□□□ -0.81
CSNK2A1-201ENST00000217244 CPLX3Q8WVH0 158 aa9.97□□□□□ -0.81
CSNK2A1-201ENST00000217244 CYP19A1P11511 503 aaPredicted RBP9.96□□□□□ -0.81
CSNK2A1-201ENST00000217244 ZMYM1Q5SVZ6 1142 aa9.96□□□□□ -0.81
CSNK2A1-201ENST00000217244 CCDC186Q7Z3E2 898 aa9.96□□□□□ -0.81
CSNK2A1-201ENST00000217244 AOPEPQ8N6M6 819 aa9.96□□□□□ -0.81
CSNK2A1-201ENST00000217244 DDX19AQ9NUU7 478 aaKnown RBP9.96□□□□□ -0.81
CSNK2A1-201ENST00000217244 CLIP2Q9UDT6 1046 aa9.96□□□□□ -0.81
CSNK2A1-201ENST00000217244 DENND2AQ9ULE3 1009 aa9.96□□□□□ -0.81
CSNK2A1-201ENST00000217244 RASGRF1Q13972 1273 aa9.96□□□□□ -0.81
CSNK2A1-201ENST00000217244 TM6SF1Q9BZW5 370 aa9.96□□□□□ -0.81
CSNK2A1-201ENST00000217244 RNF41Q9H4P4 317 aaPredicted RBP9.96□□□□□ -0.81
CSNK2A1-201ENST00000217244 ANGEL1Q9UNK9 670 aaKnown RBP9.96□□□□□ -0.81
CSNK2A1-201ENST00000217244 FER1L4A9Z1Z3 1794 aa9.96□□□□□ -0.82
CSNK2A1-201ENST00000217244 SPTLC2O15270 562 aa9.96□□□□□ -0.82
CSNK2A1-201ENST00000217244 RPS8P62241 208 aaKnown RBP9.96□□□□□ -0.82
CSNK2A1-201ENST00000217244 FAM196AQ6ZSG2 479 aa9.96□□□□□ -0.82
CSNK2A1-201ENST00000217244 NOC3LQ8WTT2 800 aaKnown RBP9.96□□□□□ -0.82
CSNK2A1-201ENST00000217244 ESR2Q92731 530 aa9.96□□□□□ -0.82
CSNK2A1-201ENST00000217244 STAMQ92783 540 aa9.96□□□□□ -0.82
CSNK2A1-201ENST00000217244 HOOK1Q9UJC3 728 aaKnown RBP9.96□□□□□ -0.82
CSNK2A1-201ENST00000217244 UQCRHLA0A096LP55 91 aa9.96□□□□□ -0.82
CSNK2A1-201ENST00000217244 USP17L12C9JPN9 530 aa9.96□□□□□ -0.82
CSNK2A1-201ENST00000217244 USP17L21D6R901 530 aa9.96□□□□□ -0.82
CSNK2A1-201ENST00000217244 UQCRHP07919 91 aa9.96□□□□□ -0.82
CSNK2A1-201ENST00000217244 HIBADHP31937 336 aaKnown RBP9.96□□□□□ -0.82
CSNK2A1-201ENST00000217244 PTPN21Q16825 1174 aa9.96□□□□□ -0.82
CSNK2A1-201ENST00000217244 STOX1Q6ZVD7 989 aa9.96□□□□□ -0.82
CSNK2A1-201ENST00000217244 KDM6AO15550 1401 aaPredicted RBP9.95□□□□□ -0.82
CSNK2A1-201ENST00000217244 AK9Q5TCS8 1911 aa9.95□□□□□ -0.82
CSNK2A1-201ENST00000217244 UFL1O94874 794 aa9.95□□□□□ -0.82
CSNK2A1-201ENST00000217244 IL6STP40189 918 aaPredicted RBP9.95□□□□□ -0.82
CSNK2A1-201ENST00000217244 TOB2Q14106 344 aaPredicted RBP9.95□□□□□ -0.82
CSNK2A1-201ENST00000217244 ZSCAN16Q9H4T2 348 aaPredicted RBP9.95□□□□□ -0.82
CSNK2A1-201ENST00000217244 KDM4FA0A1W2PPD8 638 aa9.95□□□□□ -0.82
CSNK2A1-201ENST00000217244 TRIM37O94972 964 aa9.95□□□□□ -0.82
CSNK2A1-201ENST00000217244 CYP2E1P05181 493 aaPredicted RBP9.95□□□□□ -0.82
CSNK2A1-201ENST00000217244 PDIA3P30101 505 aaKnown RBP9.95□□□□□ -0.82
CSNK2A1-201ENST00000217244 SYKP43405 635 aa9.95□□□□□ -0.82
CSNK2A1-201ENST00000217244 CRNKL1Q9BZJ0 848 aaKnown RBP9.95□□□□□ -0.82
CSNK2A1-201ENST00000217244 CABP5Q9NP86 173 aa9.95□□□□□ -0.82
CSNK2A1-201ENST00000217244 PTGS1P23219 599 aa9.95□□□□□ -0.82
CSNK2A1-201ENST00000217244 PARP10Q53GL7 1025 aa9.95□□□□□ -0.82
CSNK2A1-201ENST00000217244 IFNL3Q8IZI9 196 aa9.95□□□□□ -0.82
CSNK2A1-201ENST00000217244 V9GY48 417 aaPredicted RBP9.95□□□□□ -0.82
CSNK2A1-201ENST00000217244 CCDC96Q2M329 555 aa9.94□□□□□ -0.82
CSNK2A1-201ENST00000217244 MAPKAPK5Q8IW41 473 aa9.94□□□□□ -0.82
CSNK2A1-201ENST00000217244 LCORLQ8N3X6 602 aa9.94□□□□□ -0.82
CSNK2A1-201ENST00000217244 CRACR2BQ8N4Y2 399 aaPredicted RBP9.94□□□□□ -0.82
CSNK2A1-201ENST00000217244 MRPS27Q92552 414 aaKnown RBP9.94□□□□□ -0.82
CSNK2A1-201ENST00000217244 ERBB4Q15303 1308 aa9.94□□□□□ -0.82
CSNK2A1-201ENST00000217244 UBR1Q8IWV7 1749 aa9.94□□□□□ -0.82
CSNK2A1-201ENST00000217244 STX17P56962 302 aa9.94□□□□□ -0.82
CSNK2A1-201ENST00000217244 MARCH10Q8NA82 808 aaPredicted RBP9.94□□□□□ -0.82
CSNK2A1-201ENST00000217244 DSCC1Q9BVC3 393 aa9.94□□□□□ -0.82
CSNK2A1-201ENST00000217244 KAT14Q9H8E8 782 aa9.94□□□□□ -0.82
CSNK2A1-201ENST00000217244 USP32Q8NFA0 1604 aa9.94□□□□□ -0.82
CSNK2A1-201ENST00000217244 CCDC196A0A1B0GTZ2 297 aa9.94□□□□□ -0.82
CSNK2A1-201ENST00000217244 RFX5P48382 616 aaPredicted RBP9.94□□□□□ -0.82
CSNK2A1-201ENST00000217244 ANO10Q9NW15 660 aa9.94□□□□□ -0.82
CSNK2A1-201ENST00000217244 VPS54Q9P1Q0 977 aa9.94□□□□□ -0.82
CSNK2A1-201ENST00000217244 ARHGAP23Q9P227 1491 aa9.94□□□□□ -0.82
CSNK2A1-201ENST00000217244 PALLDQ8WX93 1383 aa9.94□□□□□ -0.82
CSNK2A1-201ENST00000217244 TSPY3P0CV98 308 aa9.93□□□□□ -0.82
CSNK2A1-201ENST00000217244 TSPY8P0CW00 308 aa9.93□□□□□ -0.82
CSNK2A1-201ENST00000217244 SOGA3Q5TF21 947 aa9.93□□□□□ -0.82
CSNK2A1-201ENST00000217244 HEATR3Q7Z4Q2 680 aa9.93□□□□□ -0.82
CSNK2A1-201ENST00000217244 CELF1Q92879 486 aaKnown RBP9.93□□□□□ -0.82
CSNK2A1-201ENST00000217244 TTC14Q96N46 770 aa9.93□□□□□ -0.82
CSNK2A1-201ENST00000217244 WTIPA6NIX2 430 aaPredicted RBP9.93□□□□□ -0.82
CSNK2A1-201ENST00000217244 TMC6Q7Z403 805 aa9.93□□□□□ -0.82
CSNK2A1-201ENST00000217244 FAM200AQ8TCP9 573 aa9.93□□□□□ -0.82
CSNK2A1-201ENST00000217244 DHX58Q96C10 678 aa9.93□□□□□ -0.82
CSNK2A1-201ENST00000217244 ISCA1Q9BUE6 129 aa9.93□□□□□ -0.82
CSNK2A1-201ENST00000217244 KRT23Q9C075 422 aa9.93□□□□□ -0.82
CSNK2A1-201ENST00000217244 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.93□□□□□ -0.821e-9■■□□□ 14.1
CSNK2A1-201ENST00000217244 NCAPD2Q15021 1401 aa9.93□□□□□ -0.82
CSNK2A1-201ENST00000217244 LDHBP07195 334 aaKnown RBP9.93□□□□□ -0.82
CSNK2A1-201ENST00000217244 ZNF445P59923 1031 aa9.93□□□□□ -0.82
CSNK2A1-201ENST00000217244 KRT40Q6A162 431 aa9.93□□□□□ -0.82
CSNK2A1-201ENST00000217244 NOL7Q9UMY1 257 aaKnown RBP9.93□□□□□ -0.82
CSNK2A1-201ENST00000217244 MST1RQ04912 1400 aa9.93□□□□□ -0.82
CSNK2A1-201ENST00000217244 PDE4BQ07343 736 aa9.93□□□□□ -0.82
CSNK2A1-201ENST00000217244 ITPK1Q13572 414 aa9.93□□□□□ -0.82
CSNK2A1-201ENST00000217244 DIXDC1Q155Q3 683 aa9.93□□□□□ -0.82
CSNK2A1-201ENST00000217244 ZNF174Q15697 407 aa9.93□□□□□ -0.82
CSNK2A1-201ENST00000217244 NSUN7Q8NE18 718 aaKnown RBP9.93□□□□□ -0.82
CSNK2A1-201ENST00000217244 TSC1Q92574 1164 aa9.93□□□□□ -0.82
CSNK2A1-201ENST00000217244 CLIC6Q96NY7 704 aa9.93□□□□□ -0.82
CSNK2A1-201ENST00000217244 FSD2A1L4K1 749 aa9.92□□□□□ -0.82
CSNK2A1-201ENST00000217244 DIS3L2Q8IYB7 885 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms