RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 ZBTB38Q8NAP3 1195 aaPredicted RBP11.24□□□□□ -0.61
CSTF1-201ENST00000217109 ZNF652Q9Y2D9 606 aa11.24□□□□□ -0.61
CSTF1-201ENST00000217109 A0A0G2JLW4 131 aa11.24□□□□□ -0.61
CSTF1-201ENST00000217109 NDUFA8P51970 172 aa11.24□□□□□ -0.61
CSTF1-201ENST00000217109 C11orf57Q6ZUT1 292 aaPredicted RBP11.24□□□□□ -0.61
CSTF1-201ENST00000217109 CATIPQ7Z7H3 387 aa11.24□□□□□ -0.61
CSTF1-201ENST00000217109 CTCFLQ8NI51 663 aaPredicted RBP11.24□□□□□ -0.61
CSTF1-201ENST00000217109 UBXN4Q92575 508 aa11.24□□□□□ -0.61
CSTF1-201ENST00000217109 UTP14AQ9BVJ6 771 aaKnown RBP11.24□□□□□ -0.61
CSTF1-201ENST00000217109 KRT23Q9C075 422 aa11.24□□□□□ -0.61
CSTF1-201ENST00000217109 CEP131Q9UPN4 1083 aa11.24□□□□□ -0.61
CSTF1-201ENST00000217109 ATL3Q6DD88 541 aa11.24□□□□□ -0.61
CSTF1-201ENST00000217109 SMARCE1Q969G3 411 aa11.24□□□□□ -0.61
CSTF1-201ENST00000217109 AIFM3Q96NN9 605 aa11.24□□□□□ -0.61
CSTF1-201ENST00000217109 CDC5LQ99459 802 aaKnown RBP11.24□□□□□ -0.61
CSTF1-201ENST00000217109 NCAPD2Q15021 1401 aa11.24□□□□□ -0.61
CSTF1-201ENST00000217109 PDE8AO60658 829 aa11.23□□□□□ -0.61
CSTF1-201ENST00000217109 TXLNAP40222 546 aa11.23□□□□□ -0.61
CSTF1-201ENST00000217109 TERF1P54274 439 aa11.23□□□□□ -0.61
CSTF1-201ENST00000217109 COL9A3Q14050 684 aaPredicted RBP11.23□□□□□ -0.61
CSTF1-201ENST00000217109 KCNJ14Q9UNX9 436 aa11.23□□□□□ -0.61
CSTF1-201ENST00000217109 PAXBP1Q9Y5B6 917 aa11.23□□□□□ -0.61
CSTF1-201ENST00000217109 SH3TC1Q8TE82 1336 aa11.23□□□□□ -0.61
CSTF1-201ENST00000217109 CCP110O43303 1012 aa11.23□□□□□ -0.61
CSTF1-201ENST00000217109 IPO7O95373 1038 aaKnown RBP11.23□□□□□ -0.61
CSTF1-201ENST00000217109 PUM3Q15397 648 aaKnown RBP11.23□□□□□ -0.61
CSTF1-201ENST00000217109 FBXO18Q8NFZ0 1043 aa11.23□□□□□ -0.61
CSTF1-201ENST00000217109 ZBTB1Q9Y2K1 713 aa11.23□□□□□ -0.61
CSTF1-201ENST00000217109 PCCAP05165 728 aaPredicted RBP11.23□□□□□ -0.61
CSTF1-201ENST00000217109 WDR17Q8IZU2 1322 aa11.23□□□□□ -0.61
CSTF1-201ENST00000217109 PDE6AP16499 860 aa11.23□□□□□ -0.61
CSTF1-201ENST00000217109 CTSWP56202 376 aa11.23□□□□□ -0.61
CSTF1-201ENST00000217109 NLRP5P59047 1200 aa11.23□□□□□ -0.61
CSTF1-201ENST00000217109 DHX8Q14562 1220 aaKnown RBP11.23□□□□□ -0.61
CSTF1-201ENST00000217109 DDB1Q16531 1140 aa11.23□□□□□ -0.61
CSTF1-201ENST00000217109 ADALQ6DHV7 355 aa11.23□□□□□ -0.61
CSTF1-201ENST00000217109 CCDC24Q8N4L8 307 aa11.23□□□□□ -0.61
CSTF1-201ENST00000217109 CNNM2Q9H8M5 875 aa11.23□□□□□ -0.61
CSTF1-201ENST00000217109 DNAI1Q9UI46 699 aa11.23□□□□□ -0.61
CSTF1-201ENST00000217109 FOXO4P98177 505 aa11.22□□□□□ -0.61
CSTF1-201ENST00000217109 SCARF1Q14162 830 aa11.22□□□□□ -0.61
CSTF1-201ENST00000217109 KIAA1524Q8TCG1 905 aa11.22□□□□□ -0.61
CSTF1-201ENST00000217109 ESR2Q92731 530 aa11.22□□□□□ -0.61
CSTF1-201ENST00000217109 DHX58Q96C10 678 aa11.22□□□□□ -0.61
CSTF1-201ENST00000217109 CABP5Q9NP86 173 aa11.22□□□□□ -0.61
CSTF1-201ENST00000217109 ANKRD26Q9UPS8 1709 aa11.22□□□□□ -0.61
CSTF1-201ENST00000217109 PXDNLA1KZ92 1463 aa11.22□□□□□ -0.61
CSTF1-201ENST00000217109 USP5P45974 858 aa11.22□□□□□ -0.61
CSTF1-201ENST00000217109 STX17P56962 302 aa11.22□□□□□ -0.61
CSTF1-201ENST00000217109 HLFQ16534 295 aa11.22□□□□□ -0.61
CSTF1-201ENST00000217109 ATG9AQ7Z3C6 839 aa11.22□□□□□ -0.61
CSTF1-201ENST00000217109 ANKRD18AQ8IVF6 992 aa11.22□□□□□ -0.61
CSTF1-201ENST00000217109 CACTINQ8WUQ7 758 aaKnown RBP11.22□□□□□ -0.61
CSTF1-201ENST00000217109 MKNK2Q9HBH9 465 aa11.22□□□□□ -0.61
CSTF1-201ENST00000217109 KIAA1468Q9P260 1216 aa11.22□□□□□ -0.61
CSTF1-201ENST00000217109 RCOR1Q9UKL0 485 aa11.22□□□□□ -0.61
CSTF1-201ENST00000217109 CARMIL3Q8ND23 1372 aa11.22□□□□□ -0.61
CSTF1-201ENST00000217109 TSPY2A6NKD2 308 aa11.22□□□□□ -0.61
CSTF1-201ENST00000217109 DZIP1Q86YF9 867 aaKnown RBP11.22□□□□□ -0.61
CSTF1-201ENST00000217109 DIS3L2Q8IYB7 885 aaKnown RBP11.22□□□□□ -0.61
CSTF1-201ENST00000217109 SPATA5Q8NB90 893 aa11.22□□□□□ -0.61
CSTF1-201ENST00000217109 LPIN2Q92539 896 aa11.22□□□□□ -0.61
CSTF1-201ENST00000217109 CCDC47Q96A33 483 aaKnown RBP11.22□□□□□ -0.61
CSTF1-201ENST00000217109 PKNOX2Q96KN3 472 aa11.22□□□□□ -0.61
CSTF1-201ENST00000217109 CLIC6Q96NY7 704 aa11.22□□□□□ -0.61
CSTF1-201ENST00000217109 BCL2L12Q9HB09 334 aa11.22□□□□□ -0.61
CSTF1-201ENST00000217109 GPR108Q9NPR9 543 aa11.22□□□□□ -0.61
CSTF1-201ENST00000217109 ZHX1Q9UKY1 873 aaPredicted RBP11.22□□□□□ -0.61
CSTF1-201ENST00000217109 ATP2B2Q01814 1243 aa11.21□□□□□ -0.61
CSTF1-201ENST00000217109 IFIT1BQ5T764 474 aaKnown RBP11.21□□□□□ -0.61
CSTF1-201ENST00000217109 SYT10Q6XYQ8 523 aa11.21□□□□□ -0.61
CSTF1-201ENST00000217109 GIGYF2Q6Y7W6 1299 aaKnown RBP11.21□□□□□ -0.61
CSTF1-201ENST00000217109 PIGBQ92521 554 aa11.21□□□□□ -0.61
CSTF1-201ENST00000217109 ZSWIM4Q9H7M6 989 aa11.21□□□□□ -0.61
CSTF1-201ENST00000217109 ANKIB1Q9P2G1 1089 aa11.21□□□□□ -0.61
CSTF1-201ENST00000217109 PFKFB1P16118 471 aa11.21□□□□□ -0.61
CSTF1-201ENST00000217109 ARID5BQ14865 1188 aa11.21□□□□□ -0.61
CSTF1-201ENST00000217109 RABL6Q3YEC7 729 aaPredicted RBP11.21□□□□□ -0.61
CSTF1-201ENST00000217109 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.21□□□□□ -0.61
CSTF1-201ENST00000217109 XPO4Q9C0E2 1151 aaKnown RBP11.21□□□□□ -0.61
CSTF1-201ENST00000217109 INCENPQ9NQS7 918 aa11.21□□□□□ -0.61
CSTF1-201ENST00000217109 KIF2AO00139 706 aaPredicted RBP11.21□□□□□ -0.62
CSTF1-201ENST00000217109 PDE8BO95263 885 aa11.21□□□□□ -0.62
CSTF1-201ENST00000217109 RFX5P48382 616 aaPredicted RBP11.21□□□□□ -0.62
CSTF1-201ENST00000217109 BCAMP50895 628 aa11.21□□□□□ -0.62
CSTF1-201ENST00000217109 PTPN21Q16825 1174 aa11.21□□□□□ -0.62
CSTF1-201ENST00000217109 CCDC150Q8NCX0 1101 aa11.21□□□□□ -0.62
CSTF1-201ENST00000217109 ZBTB9Q96C00 473 aa11.21□□□□□ -0.62
CSTF1-201ENST00000217109 TMX4Q9H1E5 349 aaPredicted RBP11.21□□□□□ -0.62
CSTF1-201ENST00000217109 KCNH3Q9ULD8 1083 aa11.21□□□□□ -0.62
CSTF1-201ENST00000217109 ZNF609O15014 1411 aa11.21□□□□□ -0.62
CSTF1-201ENST00000217109 PXDNQ92626 1479 aa11.21□□□□□ -0.62
CSTF1-201ENST00000217109 RIMS1Q86UR5 1692 aaKnown RBP11.21□□□□□ -0.62
CSTF1-201ENST00000217109 MAGEB6P1A0A0J9YX57 407 aa11.21□□□□□ -0.62
CSTF1-201ENST00000217109 CIAO1O76071 339 aa11.21□□□□□ -0.62
CSTF1-201ENST00000217109 TMEM87BQ96K49 555 aa11.21□□□□□ -0.62
CSTF1-201ENST00000217109 WWC3Q9ULE0 1092 aa11.21□□□□□ -0.62
CSTF1-201ENST00000217109 SPATA31A3Q5VYP0 1347 aa11.2□□□□□ -0.62
CSTF1-201ENST00000217109 POLR2DO15514 142 aaKnown RBP11.2□□□□□ -0.62
CSTF1-201ENST00000217109 ZPR1O75312 459 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms