RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 METTL12A8MUP2 240 aa5.89□□□□□ -1.47
CDKN3-201ENST00000216414 PRNPP04156 253 aa5.89□□□□□ -1.47
CDKN3-201ENST00000216414 ITGB5P18084 799 aa5.89□□□□□ -1.47
CDKN3-201ENST00000216414 RAB6AP20340 208 aa5.89□□□□□ -1.47
CDKN3-201ENST00000216414 FBLN7Q53RD9 439 aa5.89□□□□□ -1.47
CDKN3-201ENST00000216414 ZAR1Q86SH2 424 aa5.89□□□□□ -1.47
CDKN3-201ENST00000216414 FLCNQ8NFG4 579 aa5.89□□□□□ -1.47
CDKN3-201ENST00000216414 PRKAG2Q9UGJ0 569 aa5.89□□□□□ -1.47
CDKN3-201ENST00000216414 AMOTL2Q9Y2J4 779 aa5.89□□□□□ -1.47
CDKN3-201ENST00000216414 FAM170BA6NMN3 283 aa5.88□□□□□ -1.47
CDKN3-201ENST00000216414 EHHADHQ08426 723 aa5.88□□□□□ -1.47
CDKN3-201ENST00000216414 AGBL5Q8NDL9 886 aa5.88□□□□□ -1.47
CDKN3-201ENST00000216414 LRRC4CQ9HCJ2 640 aa5.88□□□□□ -1.47
CDKN3-201ENST00000216414 BSDC1Q9NW68 430 aaPredicted RBP5.88□□□□□ -1.47
CDKN3-201ENST00000216414 DBX1A6NMT0 343 aa5.87□□□□□ -1.47
CDKN3-201ENST00000216414 ADH5P11766 374 aa5.87□□□□□ -1.47
CDKN3-201ENST00000216414 USP5P45974 858 aa5.87□□□□□ -1.47
CDKN3-201ENST00000216414 PEAR1Q5VY43 1037 aaPredicted RBP5.87□□□□□ -1.47
CDKN3-201ENST00000216414 NFXL1Q6ZNB6 911 aa5.87□□□□□ -1.47
CDKN3-201ENST00000216414 EZH1Q92800 747 aaPredicted RBP5.87□□□□□ -1.47
CDKN3-201ENST00000216414 ACTL7BQ9Y614 415 aa5.87□□□□□ -1.47
CDKN3-201ENST00000216414 POLR3DP05423 398 aaPredicted RBP5.86□□□□□ -1.47
CDKN3-201ENST00000216414 NFICP08651 508 aa5.86□□□□□ -1.47
CDKN3-201ENST00000216414 PCDH1Q08174 1060 aa5.86□□□□□ -1.47
CDKN3-201ENST00000216414 MAP7Q14244 749 aa5.86□□□□□ -1.47
CDKN3-201ENST00000216414 PKN1Q16512 942 aa5.86□□□□□ -1.47
CDKN3-201ENST00000216414 AKAP4Q5JQC9 854 aa5.86□□□□□ -1.47
CDKN3-201ENST00000216414 DUSP27Q5VZP5 1158 aa5.86□□□□□ -1.47
CDKN3-201ENST00000216414 DYMQ7RTS9 669 aa5.86□□□□□ -1.47
CDKN3-201ENST00000216414 RAD18Q9NS91 495 aa5.86□□□□□ -1.47
CDKN3-201ENST00000216414 SERPINA10Q9UK55 444 aa5.86□□□□□ -1.47
CDKN3-201ENST00000216414 A0A096LPE4 126 aa5.85□□□□□ -1.47
CDKN3-201ENST00000216414 A0A1W2PPZ6 126 aa5.85□□□□□ -1.47
CDKN3-201ENST00000216414 EIF4EBP3O60516 100 aaPredicted RBP5.85□□□□□ -1.47
CDKN3-201ENST00000216414 FAM13AO94988 1023 aa5.85□□□□□ -1.47
CDKN3-201ENST00000216414 CTSBP07858 339 aa5.85□□□□□ -1.47
CDKN3-201ENST00000216414 MAOBP27338 520 aa5.85□□□□□ -1.47
CDKN3-201ENST00000216414 POU4F3Q15319 338 aa5.85□□□□□ -1.47
CDKN3-201ENST00000216414 LCE4AQ5TA78 99 aa5.85□□□□□ -1.47
CDKN3-201ENST00000216414 KRTAP4-11Q9BYQ6 195 aa5.85□□□□□ -1.47
CDKN3-201ENST00000216414 NRSN2Q9GZP1 204 aa5.85□□□□□ -1.47
CDKN3-201ENST00000216414 ZFYVE28Q9HCC9 887 aa5.85□□□□□ -1.47
CDKN3-201ENST00000216414 ZC3H7BQ9UGR2 993 aaKnown RBP5.85□□□□□ -1.47
CDKN3-201ENST00000216414 AP4E1Q9UPM8 1137 aa5.85□□□□□ -1.47
CDKN3-201ENST00000216414 BIN1O00499 593 aa5.84□□□□□ -1.47
CDKN3-201ENST00000216414 FZD6O60353 706 aa5.84□□□□□ -1.47
CDKN3-201ENST00000216414 CYP11A1P05108 521 aa5.84□□□□□ -1.47
CDKN3-201ENST00000216414 CYP27A1Q02318 531 aa5.84□□□□□ -1.47
CDKN3-201ENST00000216414 COL19A1Q14993 1142 aa5.84□□□□□ -1.47
CDKN3-201ENST00000216414 HP1BP3Q5SSJ5 553 aaPredicted RBP5.84□□□□□ -1.47
CDKN3-201ENST00000216414 ZNF648Q5T619 568 aaPredicted RBP5.84□□□□□ -1.47
CDKN3-201ENST00000216414 ZNF765Q7L2R6 523 aa5.84□□□□□ -1.47
CDKN3-201ENST00000216414 GATA6Q92908 595 aa5.84□□□□□ -1.47
CDKN3-201ENST00000216414 CLEC4MQ9H2X3 399 aaPredicted RBP5.84□□□□□ -1.47
CDKN3-201ENST00000216414 SEMA6CQ9H3T2 930 aa5.84□□□□□ -1.47
CDKN3-201ENST00000216414 LIN7BQ9HAP6 207 aa5.84□□□□□ -1.47
CDKN3-201ENST00000216414 PAK6Q9NQU5 681 aaPredicted RBP5.84□□□□□ -1.47
CDKN3-201ENST00000216414 ABL1P00519 1130 aa5.83□□□□□ -1.48
CDKN3-201ENST00000216414 SSFA2P28290 1259 aa5.83□□□□□ -1.48
CDKN3-201ENST00000216414 ZNF124Q15973 351 aa5.83□□□□□ -1.48
CDKN3-201ENST00000216414 ZNF423Q2M1K9 1284 aa5.83□□□□□ -1.48
CDKN3-201ENST00000216414 SPRED3Q2MJR0 410 aa5.83□□□□□ -1.48
CDKN3-201ENST00000216414 CORO1BQ9BR76 489 aa5.83□□□□□ -1.48
CDKN3-201ENST00000216414 ANO2Q9NQ90 1003 aa5.83□□□□□ -1.48
CDKN3-201ENST00000216414 FAM105AQ9NUU6 356 aa5.83□□□□□ -1.48
CDKN3-201ENST00000216414 CCDC87Q9NVE4 849 aa5.83□□□□□ -1.48
CDKN3-201ENST00000216414 MTMR7Q9Y216 660 aa5.83□□□□□ -1.48
CDKN3-201ENST00000216414 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.82□□□□□ -1.48
CDKN3-201ENST00000216414 A0A1W2PP55 124 aa5.82□□□□□ -1.48
CDKN3-201ENST00000216414 FARP2O94887 1054 aaPredicted RBP5.82□□□□□ -1.48
CDKN3-201ENST00000216414 NPR3P17342 541 aa5.82□□□□□ -1.48
CDKN3-201ENST00000216414 ASPAP45381 313 aa5.82□□□□□ -1.48
CDKN3-201ENST00000216414 GRIA4P48058 902 aa5.82□□□□□ -1.48
CDKN3-201ENST00000216414 GJD3Q8N144 294 aa5.82□□□□□ -1.48
CDKN3-201ENST00000216414 ACSS3Q9H6R3 686 aa5.82□□□□□ -1.48
CDKN3-201ENST00000216414 ZFYVE1Q9HBF4 777 aa5.82□□□□□ -1.48
CDKN3-201ENST00000216414 LGR6Q9HBX8 967 aa5.82□□□□□ -1.48
CDKN3-201ENST00000216414 DAGLAQ9Y4D2 1042 aa5.82□□□□□ -1.48
CDKN3-201ENST00000216414 ECEL1O95672 775 aa5.81□□□□□ -1.48
CDKN3-201ENST00000216414 ZNF211Q13398 564 aaPredicted RBP5.81□□□□□ -1.48
CDKN3-201ENST00000216414 SF3B2Q13435 895 aaKnown RBP5.81□□□□□ -1.48
CDKN3-201ENST00000216414 PDE3AQ14432 1141 aa5.81□□□□□ -1.48
CDKN3-201ENST00000216414 CCNJLQ8IV13 435 aa5.81□□□□□ -1.48
CDKN3-201ENST00000216414 DDX54Q8TDD1 881 aaKnown RBP5.81□□□□□ -1.48
CDKN3-201ENST00000216414 SLC5A6Q9Y289 635 aa5.81□□□□□ -1.48
CDKN3-201ENST00000216414 ARID3CA6NKF2 412 aa5.8□□□□□ -1.48
CDKN3-201ENST00000216414 TMEM88BA6NKF7 163 aa5.8□□□□□ -1.48
CDKN3-201ENST00000216414 FKBP4Q02790 459 aaKnown RBP eCLIP5.8□□□□□ -1.48
CDKN3-201ENST00000216414 PLCL1Q15111 1095 aa5.8□□□□□ -1.48
CDKN3-201ENST00000216414 SPOCD1Q6ZMY3 1216 aa5.8□□□□□ -1.48
CDKN3-201ENST00000216414 ZNF574Q6ZN55 896 aaPredicted RBP5.8□□□□□ -1.48
CDKN3-201ENST00000216414 KSR1Q8IVT5 923 aa5.8□□□□□ -1.48
CDKN3-201ENST00000216414 GALNT12Q8IXK2 581 aa5.8□□□□□ -1.48
CDKN3-201ENST00000216414 TCF12Q99081 682 aa5.8□□□□□ -1.48
CDKN3-201ENST00000216414 TRIM56Q9BRZ2 755 aaKnown RBP5.8□□□□□ -1.48
CDKN3-201ENST00000216414 DYNC1LI2O43237 492 aaPredicted RBP5.79□□□□□ -1.48
CDKN3-201ENST00000216414 BCL7CQ8WUZ0 217 aaPredicted RBP5.79□□□□□ -1.48
CDKN3-201ENST00000216414 SLC38A3Q99624 504 aa5.79□□□□□ -1.48
CDKN3-201ENST00000216414 C1GALT1Q9NS00 363 aa5.79□□□□□ -1.48
CDKN3-201ENST00000216414 AOC2O75106 756 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms