RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 ZBTB1Q9Y2K1 713 aa11.82□□□□□ -0.52
NIPAL3-201ENST00000003912 IBTKQ9P2D0 1353 aaPredicted RBP11.82□□□□□ -0.52
NIPAL3-201ENST00000003912 B4E1Z4 1266 aa11.82□□□□□ -0.52
NIPAL3-201ENST00000003912 ZAP70P43403 619 aa11.82□□□□□ -0.52
NIPAL3-201ENST00000003912 GDPD2Q9HCC8 539 aa11.82□□□□□ -0.52
NIPAL3-201ENST00000003912 AFF2P51816 1311 aa11.82□□□□□ -0.52
NIPAL3-201ENST00000003912 CDC42BPGQ6DT37 1551 aa11.82□□□□□ -0.52
NIPAL3-201ENST00000003912 BRDTQ58F21 947 aaPredicted RBP11.82□□□□□ -0.52
NIPAL3-201ENST00000003912 FERMT2Q96AC1 680 aa11.82□□□□□ -0.52
NIPAL3-201ENST00000003912 NUP88Q99567 741 aaPredicted RBP11.82□□□□□ -0.52
NIPAL3-201ENST00000003912 ABCA9Q8IUA7 1624 aa11.81□□□□□ -0.52
NIPAL3-201ENST00000003912 BIN1O00499 593 aa11.81□□□□□ -0.52
NIPAL3-201ENST00000003912 SERPINB2P05120 415 aa11.81□□□□□ -0.52
NIPAL3-201ENST00000003912 AK2P54819 239 aa11.81□□□□□ -0.52
NIPAL3-201ENST00000003912 ZNF532Q9HCE3 1301 aa11.81□□□□□ -0.52
NIPAL3-201ENST00000003912 TDRD12Q587J7 1177 aaKnown RBP11.81□□□□□ -0.52
NIPAL3-201ENST00000003912 FAM182BQ5T319 152 aa11.81□□□□□ -0.52
NIPAL3-201ENST00000003912 USP40Q9NVE5 1235 aa11.81□□□□□ -0.52
NIPAL3-201ENST00000003912 PTPDC1A2A3K4 754 aa11.81□□□□□ -0.52
NIPAL3-201ENST00000003912 TNNT3P45378 269 aaPredicted RBP11.81□□□□□ -0.52
NIPAL3-201ENST00000003912 TCP10Q12799 353 aa11.81□□□□□ -0.52
NIPAL3-201ENST00000003912 TRIM47Q96LD4 638 aa11.81□□□□□ -0.52
NIPAL3-201ENST00000003912 GOPCQ9HD26 462 aa11.81□□□□□ -0.52
NIPAL3-201ENST00000003912 ZBED4O75132 1171 aa11.81□□□□□ -0.52
NIPAL3-201ENST00000003912 ATP5JP18859 108 aa11.81□□□□□ -0.52
NIPAL3-201ENST00000003912 CCDC129Q6ZRS4 1044 aa11.81□□□□□ -0.52
NIPAL3-201ENST00000003912 MAPKAPK5Q8IW41 473 aa11.81□□□□□ -0.52
NIPAL3-201ENST00000003912 ZSCAN12O43309 604 aa11.8□□□□□ -0.52
NIPAL3-201ENST00000003912 BEND3Q5T5X7 828 aa11.8□□□□□ -0.52
NIPAL3-201ENST00000003912 BRAPQ7Z569 592 aa11.8□□□□□ -0.52
NIPAL3-201ENST00000003912 MRPS27Q92552 414 aaKnown RBP11.8□□□□□ -0.52
NIPAL3-201ENST00000003912 GTPBP4Q9BZE4 634 aaKnown RBP11.8□□□□□ -0.52
NIPAL3-201ENST00000003912 CSADQ9Y600 493 aa11.8□□□□□ -0.52
NIPAL3-201ENST00000003912 PPEF1O14829 653 aaPredicted RBP11.8□□□□□ -0.52
NIPAL3-201ENST00000003912 BACH1O14867 736 aa11.8□□□□□ -0.52
NIPAL3-201ENST00000003912 KRT13P13646 458 aa11.8□□□□□ -0.52
NIPAL3-201ENST00000003912 TGFBRAP1Q8WUH2 860 aa11.8□□□□□ -0.52
NIPAL3-201ENST00000003912 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.8□□□□□ -0.52
NIPAL3-201ENST00000003912 SLC1A4P43007 532 aa11.8□□□□□ -0.52
NIPAL3-201ENST00000003912 SNX21Q969T3 373 aa11.8□□□□□ -0.52
NIPAL3-201ENST00000003912 ARPP21Q9UBL0 812 aaPredicted RBP11.8□□□□□ -0.52
NIPAL3-201ENST00000003912 USP8P40818 1118 aa11.8□□□□□ -0.52
NIPAL3-201ENST00000003912 PRKG1Q13976 671 aa11.8□□□□□ -0.52
NIPAL3-201ENST00000003912 DCAF15Q66K64 600 aa11.8□□□□□ -0.52
NIPAL3-201ENST00000003912 PLEKHF1Q96S99 279 aa11.8□□□□□ -0.52
NIPAL3-201ENST00000003912 USP44Q9H0E7 712 aa11.8□□□□□ -0.52
NIPAL3-201ENST00000003912 AS3MTQ9HBK9 375 aa11.8□□□□□ -0.52
NIPAL3-201ENST00000003912 XDHP47989 1333 aa11.8□□□□□ -0.52
NIPAL3-201ENST00000003912 USO1O60763 962 aaKnown RBP11.8□□□□□ -0.52
NIPAL3-201ENST00000003912 CCDC172P0C7W6 258 aa11.8□□□□□ -0.52
NIPAL3-201ENST00000003912 ASIC1P78348 528 aa11.8□□□□□ -0.52
NIPAL3-201ENST00000003912 TCHPQ9BT92 498 aa11.8□□□□□ -0.52
NIPAL3-201ENST00000003912 ABCC4O15439 1325 aa11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 ADGRB3O60242 1522 aa11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 GOLGA6L10A6NI86 522 aa11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 ECM2O94769 699 aaPredicted RBP11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 CHRNDQ07001 517 aa11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 PPP2R5BQ15173 497 aa11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 RRAGBQ5VZM2 374 aa11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 CERKQ8TCT0 537 aa11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 ANGEL1Q9UNK9 670 aaKnown RBP11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 LEMD3Q9Y2U8 911 aa11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 ERVV-1B6SEH8 477 aa11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 RXRAP19793 462 aa11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 AFMP43652 599 aa11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 SETQ01105 290 aaPredicted RBP11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 CCDC112Q8NEF3 446 aa11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 LZTS2Q9BRK4 669 aa11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 TNS3Q68CZ2 1445 aa11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 BBOX1O75936 387 aa11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 DEXIO95424 95 aa11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 UBE4AQ14139 1066 aa11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 ZYXQ15942 572 aaKnown RBP11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 ENOX2Q16206 610 aaKnown RBP11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 DTHD1Q6ZMT9 781 aa11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 VSIG10Q8N0Z9 540 aa11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 CDK12Q9NYV4 1490 aaPredicted RBP11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 PALLDQ8WX93 1383 aa11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 SPTLC2O15270 562 aa11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 FAM13AO94988 1023 aa11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 F13A1P00488 732 aa11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 RPS6KB1P23443 525 aa11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 RBM6P78332 1123 aaKnown RBP11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 SSH3Q8TE77 659 aa11.79□□□□□ -0.52
NIPAL3-201ENST00000003912 SLC27A2O14975 620 aa11.78□□□□□ -0.52
NIPAL3-201ENST00000003912 PRDM1O75626 825 aa11.78□□□□□ -0.52
NIPAL3-201ENST00000003912 NEFHP12036 1026 aa11.78□□□□□ -0.52
NIPAL3-201ENST00000003912 IRX3P78415 501 aaPredicted RBP11.78□□□□□ -0.52
NIPAL3-201ENST00000003912 PIGBQ92521 554 aa11.78□□□□□ -0.52
NIPAL3-201ENST00000003912 DCPSQ96C86 337 aaKnown RBP11.78□□□□□ -0.52
NIPAL3-201ENST00000003912 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.78□□□□□ -0.52
NIPAL3-201ENST00000003912 ZNF804BA4D1E1 1349 aa11.78□□□□□ -0.52
NIPAL3-201ENST00000003912 HEG1Q9ULI3 1381 aa11.78□□□□□ -0.52
NIPAL3-201ENST00000003912 PHACTR2O75167 634 aa11.78□□□□□ -0.52
NIPAL3-201ENST00000003912 MCM7P33993 719 aa11.78□□□□□ -0.52
NIPAL3-201ENST00000003912 USP26Q9BXU7 913 aa11.78□□□□□ -0.52
NIPAL3-201ENST00000003912 PSMA7O14818 248 aa11.78□□□□□ -0.52
NIPAL3-201ENST00000003912 MARCKSP29966 332 aaPredicted RBP11.78□□□□□ -0.52
NIPAL3-201ENST00000003912 GYG1P46976 350 aa11.78□□□□□ -0.52
NIPAL3-201ENST00000003912 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms