RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Erc2Q6PH08 957 aa10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 Map10Q8BJS7 891 aa10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 Hps4Q99KG7 671 aa10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 Txnrd3Q99MD6 652 aa10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 Myh15E9Q264 1925 aa10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 Wdr63B2RY71 923 aa10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 Arid4aF8VPQ2 1261 aaKnown RBP10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 Prkg1P0C605 671 aa10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 Slc7a3P70423 618 aa10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 Nell2Q61220 819 aa10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 HomezQ80W88 542 aa10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 GorabQ8BRM2 368 aa10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 Pcdhb5Q91XZ5 792 aa10.06□□□□□ -0.8
Trim39-205ENSMUST00000173369 Cyp24a1Q64441 514 aa10.05□□□□□ -0.8
Trim39-205ENSMUST00000173369 Atl3Q91YH5 541 aa10.05□□□□□ -0.8
Trim39-205ENSMUST00000173369 Ubxn2aQ99KJ0 258 aa10.05□□□□□ -0.8
Trim39-205ENSMUST00000173369 MycnP03966 462 aaKnown RBP10.05□□□□□ -0.8
Trim39-205ENSMUST00000173369 Cyp2d10P24456 504 aa10.05□□□□□ -0.8
Trim39-205ENSMUST00000173369 ZyxQ62523 564 aa10.05□□□□□ -0.8
Trim39-205ENSMUST00000173369 Riok1Q922Q2 567 aa10.05□□□□□ -0.8
Trim39-205ENSMUST00000173369 Scn9aQ62205 1984 aa10.04□□□□□ -0.8
Trim39-205ENSMUST00000173369 Prl7d1P04769 244 aa10.04□□□□□ -0.8
Trim39-205ENSMUST00000173369 Gtpbp6Q3U6U5 514 aa10.04□□□□□ -0.8
Trim39-205ENSMUST00000173369 Tmem179Q8BHH9 233 aa10.04□□□□□ -0.8
Trim39-205ENSMUST00000173369 Trappc12Q8K2L8 797 aa10.04□□□□□ -0.8
Trim39-205ENSMUST00000173369 Polr3dQ91WD1 398 aa10.04□□□□□ -0.8
Trim39-205ENSMUST00000173369 MthfsQ9D110 203 aa10.04□□□□□ -0.8
Trim39-205ENSMUST00000173369 NesQ6P5H2 1864 aaKnown RBP10.04□□□□□ -0.8
Trim39-205ENSMUST00000173369 Nrxn2E9Q7X7 1710 aa10.04□□□□□ -0.8
Trim39-205ENSMUST00000173369 Zkscan2G3X952 960 aa10.04□□□□□ -0.8
Trim39-205ENSMUST00000173369 Myl6bQ8CI43 207 aa10.04□□□□□ -0.8
Trim39-205ENSMUST00000173369 Clstn1Q9EPL2 979 aa10.04□□□□□ -0.8
Trim39-205ENSMUST00000173369 Zfp646Q6NV66 1788 aa10.04□□□□□ -0.8
Trim39-205ENSMUST00000173369 Znf609Q8BZ47 1413 aa10.04□□□□□ -0.8
Trim39-205ENSMUST00000173369 Abl1P00520 1123 aa10.03□□□□□ -0.8
Trim39-205ENSMUST00000173369 Cyp2d9P11714 504 aa10.03□□□□□ -0.8
Trim39-205ENSMUST00000173369 Tbc1d2bQ3U0J8 965 aa10.03□□□□□ -0.8
Trim39-205ENSMUST00000173369 SpidrQ8BGX7 933 aa10.03□□□□□ -0.8
Trim39-205ENSMUST00000173369 Ripk4Q9ERK0 786 aa10.03□□□□□ -0.8
Trim39-205ENSMUST00000173369 Megf6Q80V70 1572 aa10.03□□□□□ -0.8
Trim39-205ENSMUST00000173369 Cfap44E9Q5M6 1843 aa10.03□□□□□ -0.8
Trim39-205ENSMUST00000173369 Cap1P40124 474 aa10.03□□□□□ -0.8
Trim39-205ENSMUST00000173369 Yy1Q00899 414 aa10.03□□□□□ -0.8
Trim39-205ENSMUST00000173369 Psmd1Q3TXS7 953 aa10.03□□□□□ -0.8
Trim39-205ENSMUST00000173369 Cgnl1Q6AW69 1298 aa10.03□□□□□ -0.8
Trim39-205ENSMUST00000173369 Cetn4Q8K4K1 168 aa10.03□□□□□ -0.8
Trim39-205ENSMUST00000173369 Ascc2Q91WR3 749 aa10.03□□□□□ -0.8
Trim39-205ENSMUST00000173369 FliiQ9JJ28 1271 aa10.03□□□□□ -0.8
Trim39-205ENSMUST00000173369 1700003F12RikA2AKE5 210 aa10.03□□□□□ -0.8
Trim39-205ENSMUST00000173369 Nkx1-2P42580 305 aa10.03□□□□□ -0.8
Trim39-205ENSMUST00000173369 Wnt10bP48614 389 aa10.03□□□□□ -0.8
Trim39-205ENSMUST00000173369 Lrch1P62046 709 aa10.03□□□□□ -0.8
Trim39-205ENSMUST00000173369 Cnot7Q60809 285 aa10.03□□□□□ -0.8
Trim39-205ENSMUST00000173369 HdlbpQ8VDJ3 1268 aaKnown RBP10.03□□□□□ -0.8
Trim39-205ENSMUST00000173369 Ube3bQ9ES34 1070 aa10.03□□□□□ -0.8
Trim39-205ENSMUST00000173369 Scn11aQ9R053 1765 aa10.02□□□□□ -0.8
Trim39-205ENSMUST00000173369 CrkQ64010 304 aa10.02□□□□□ -0.81
Trim39-205ENSMUST00000173369 Tor1aip2Q8BYU6 502 aa10.02□□□□□ -0.81
Trim39-205ENSMUST00000173369 Stn1Q8K2X3 378 aa10.02□□□□□ -0.81
Trim39-205ENSMUST00000173369 Pold4Q9CWP8 107 aa10.02□□□□□ -0.81
Trim39-205ENSMUST00000173369 Mageb2A2AHM0 380 aa10.02□□□□□ -0.81
Trim39-205ENSMUST00000173369 CrcpO35427 148 aa10.02□□□□□ -0.81
Trim39-205ENSMUST00000173369 Map3k9Q3U1V8 1077 aa10.02□□□□□ -0.81
Trim39-205ENSMUST00000173369 Abtb2Q7TQI7 1024 aa10.02□□□□□ -0.81
Trim39-205ENSMUST00000173369 1700018B08RikQ9DA83 213 aa10.02□□□□□ -0.81
Trim39-205ENSMUST00000173369 EspnQ9ET47 871 aa10.02□□□□□ -0.81
Trim39-205ENSMUST00000173369 Casz1Q9CWL2 1761 aa10.02□□□□□ -0.81
Trim39-205ENSMUST00000173369 Clrn2B2RVW2 232 aa10.01□□□□□ -0.81
Trim39-205ENSMUST00000173369 Tbc1d32Q3URV1 1296 aa10.01□□□□□ -0.81
Trim39-205ENSMUST00000173369 Oog3Q3UWY1 500 aa10.01□□□□□ -0.81
Trim39-205ENSMUST00000173369 Fam196bQ6GQV1 535 aa10.01□□□□□ -0.81
Trim39-205ENSMUST00000173369 Ppp2r3aB2RXC8 1150 aa10.01□□□□□ -0.81
Trim39-205ENSMUST00000173369 Grem2O88273 168 aa10.01□□□□□ -0.81
Trim39-205ENSMUST00000173369 MecomP14404 1042 aa10.01□□□□□ -0.81
Trim39-205ENSMUST00000173369 PgfP49764 158 aa10.01□□□□□ -0.81
Trim39-205ENSMUST00000173369 Mum1l1Q4VA55 681 aa10.01□□□□□ -0.81
Trim39-205ENSMUST00000173369 Hand2Q61039 217 aa10.01□□□□□ -0.81
Trim39-205ENSMUST00000173369 Rgl2Q61193 778 aa10.01□□□□□ -0.81
Trim39-205ENSMUST00000173369 Agtpbp1Q641K1 1218 aa10.01□□□□□ -0.81
Trim39-205ENSMUST00000173369 CbarpQ66L44 698 aa10.01□□□□□ -0.81
Trim39-205ENSMUST00000173369 Rapgefl1Q68EF8 662 aa10.01□□□□□ -0.81
Trim39-205ENSMUST00000173369 Tex2Q6ZPJ0 1128 aaKnown RBP10.01□□□□□ -0.81
Trim39-205ENSMUST00000173369 Tshz3Q8CGV9 1081 aa10.01□□□□□ -0.81
Trim39-205ENSMUST00000173369 Rai14Q9EP71 979 aaKnown RBP10.01□□□□□ -0.81
Trim39-205ENSMUST00000173369 Hs1bp3Q3TC93 395 aa10□□□□□ -0.81
Trim39-205ENSMUST00000173369 Tbc1d9Q3UYK3 1264 aa10□□□□□ -0.81
Trim39-205ENSMUST00000173369 Mctp2Q5RJH2 878 aa10□□□□□ -0.81
Trim39-205ENSMUST00000173369 Adgra3Q7TT36 1310 aa10□□□□□ -0.81
Trim39-205ENSMUST00000173369 Pramel6Q810Y9 485 aa10□□□□□ -0.81
Trim39-205ENSMUST00000173369 Rdm1Q9CQK3 281 aa10□□□□□ -0.81
Trim39-205ENSMUST00000173369 Ppil2Q9D787 521 aa10□□□□□ -0.81
Trim39-205ENSMUST00000173369 Npc1l1Q6T3U4 1333 aa10□□□□□ -0.81
Trim39-205ENSMUST00000173369 Mfap1aC0HKD8 439 aaKnown RBP10□□□□□ -0.81
Trim39-205ENSMUST00000173369 Mfap1bC0HKD9 439 aaKnown RBP10□□□□□ -0.81
Trim39-205ENSMUST00000173369 Tmem39bQ810L4 492 aa10□□□□□ -0.81
Trim39-205ENSMUST00000173369 Atxn7Q8R4I1 867 aa10□□□□□ -0.81
Trim39-205ENSMUST00000173369 Ccdc39Q9D5Y1 937 aa10□□□□□ -0.81
Trim39-205ENSMUST00000173369 Chmp4cQ9D7F7 232 aa10□□□□□ -0.81
Trim39-205ENSMUST00000173369 Bnip3O55003 187 aa10□□□□□ -0.81
Trim39-205ENSMUST00000173369 Pde4aO89084 844 aa10□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 45.7 ms