RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Rbm8aQ9CWZ3 174 aa10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Pde3aQ9Z0X4 1141 aa10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Irgm2A0A140LIF8 407 aa10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Stat1P42225 749 aa10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Nf2P46662 596 aa10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Limch1Q3UH68 1057 aa10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Abcb6Q9DC29 842 aa10.08□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Mmp8O70138 465 aa10.07□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Anxa1P10107 346 aaKnown RBP10.07□□□□□ -0.8
Col28a1-201ENSMUST00000115537 EmbP21995 330 aa10.07□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Rrp1P56183 494 aaKnown RBP10.07□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Anks1aP59672 1150 aa10.07□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Ncoa7Q6DFV7 943 aa10.07□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Adcy2Q80TL1 1090 aa10.07□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Il1rapl2Q9ERS6 686 aa10.07□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Sh3tc1G3X9F6 1346 aa10.07□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Aox1O54754 1333 aa10.07□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Slc7a3P70423 618 aa10.07□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Fsd1Q7TPM6 496 aa10.07□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Mei4Q8BRM6 389 aa10.07□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Ppfibp1Q8C8U0 969 aaKnown RBP10.07□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Gm11983V9GXS8 105 aa10.07□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Prr5lA2AVJ5 370 aa10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Cct5P80316 541 aaKnown RBP10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Lins1Q3U1D0 764 aa10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Bicdl2Q8CHW5 507 aa10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Rab3il1Q8VDV3 383 aa10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Ppp4r3bQ922R5 820 aa10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Cep89Q9CZX2 791 aa10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Foxp4Q9DBY0 795 aaKnown RBP10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Gemin5Q8BX17 1502 aaKnown RBP10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Trerf1Q8BXJ2 1205 aa10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Zfp113Q8C689 439 aa10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Cnksr1A2A9K7 700 aa10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Tnni2P13412 182 aa10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Gpr162Q3UN16 588 aa10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Srp68Q8BMA6 625 aaKnown RBP10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Pwp2Q8BU03 919 aaKnown RBP10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Slx1bQ8BX32 270 aa10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Cdca7lQ922M5 438 aa10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Ccdc47Q9D024 483 aaKnown RBP10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 1700006A11RikB9EHI3 544 aa10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 TbcaP48428 108 aaKnown RBP10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 FanccP50652 591 aa10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Vps33bP59016 617 aa10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Atp1a3Q6PIC6 1013 aa10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Ppm1eQ80TL0 749 aa10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Ccdc158Q8CDI6 1109 aa10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Rbm28Q8CGC6 750 aaKnown RBP10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Vps37cQ8R105 352 aa10.06□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Odf2A3KGV1 830 aaKnown RBP10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Csrnp1P59054 583 aa10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Cplx2P84086 134 aa10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Prpf4bQ61136 1007 aaKnown RBP10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Me3Q8BMF3 604 aa10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Golim4Q8BXA1 655 aa10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 TxlnbQ8VBT1 685 aa10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Riok1Q922Q2 567 aa10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Hmx1O70218 332 aa10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Itga6Q61739 1091 aa10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Q8VDP2 222 aa10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Atg3Q9CPX6 314 aa10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Ftsj3Q9DBE9 838 aaKnown RBP10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Rps6ka4Q9Z2B9 773 aa10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Letm1Q9Z2I0 738 aa10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Simc1E9Q6E9 1354 aa10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Iqsec2Q5DU25 1478 aa10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 AW822073A0A0N4SUK1 652 aa10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Kcnh4A2A5F7 1018 aa10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Specc1lQ2KN98 1118 aaKnown RBP10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Ppp1r7Q3UM45 361 aa10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Ddx46Q569Z5 1032 aaKnown RBP10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 MmeQ61391 750 aa10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Q66JV7 365 aa10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 MarsQ68FL6 902 aaKnown RBP10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Secisbp2lQ6A098 1086 aaKnown RBP10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 TxlnaQ6PAM1 554 aaKnown RBP10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Rassf10Q8BL43 508 aa10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Ints4Q8CIM8 964 aa10.05□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Diaph1O08808 1255 aa10.04□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Nbr1P97432 988 aa10.04□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Spg7Q3ULF4 781 aa10.04□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Sdad1Q80UZ2 687 aaKnown RBP10.04□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Klhl30Q8C3F7 581 aa10.04□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Q8C6G1 249 aa10.04□□□□□ -0.8
Col28a1-201ENSMUST00000115537 DpydQ8CHR6 1025 aa10.04□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Rhot2Q8JZN7 620 aa10.04□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Ribc1Q9D0B8 379 aa10.04□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Eif2ak4Q9QZ05 1648 aa10.04□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Izumo3A6PWV3 263 aa10.04□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Cct2P80314 535 aaKnown RBP10.04□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Arid3aQ62431 601 aa10.04□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Pcdhb15Q91Y04 786 aa10.04□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Mrpl44Q9CY73 333 aaKnown RBP10.04□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Ak2Q9WTP6 239 aa10.04□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Arhgap33Q80YF9 1305 aa10.04□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Me1P06801 572 aa10.04□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Timm10P62073 90 aa10.04□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Lrit1Q8K099 624 aa10.04□□□□□ -0.8
Col28a1-201ENSMUST00000115537 Tada3Q8R0L9 432 aa10.04□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms