RNA–Protein interactions for RNA: ENSMUST00000113690.7

Tpm1-209, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 3 BASIC

Gene Tpm1, Length 2,890 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-209ENSMUST00000113690 Krt39Q6IFX4 482 aa17.01■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Tjp1P39447 1745 aaKnown RBP17.01■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Fez2Q6TYB5 348 aa17.01■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Maats1Q8BRC6 783 aa17.01■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Cnot6lQ8VEG6 555 aa17.01■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Ltb4r2Q9JJL9 360 aa17.01■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Ccne2Q9Z238 404 aa17.01■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Gm21663A0A0G2JE01 267 aa17■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Prr29B1ARI9 187 aa17■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Gm7361D3Z6R1 267 aa17■□□□□ 0.31
Tpm1-209ENSMUST00000113690 5031410I06RikE9Q4E0 267 aa17■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Gm1979E9QAN3 267 aa17■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Gm10134F6ZQC6 126 aa17■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Gm5862K7N5V5 267 aa17■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Gm10220K7N660 267 aa17■□□□□ 0.31
Tpm1-209ENSMUST00000113690 NefhP19246 1090 aa17■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Myd88P22366 296 aa17■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Gng11P61953 73 aa17■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Anp32eP97822 260 aaKnown RBP17■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Ankrd40Q5SUE8 363 aa17■□□□□ 0.31
Tpm1-209ENSMUST00000113690 MlecQ6ZQI3 291 aaKnown RBP17■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Nek9Q8K1R7 984 aa17■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Filip1Q9CS72 1211 aa17■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Stard3nlQ9DCI3 235 aa17■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Shank2Q80Z38 1476 aa17■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Topaz1E5FYH1 1653 aa17■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Cyp26a1O55127 497 aa17■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Gsdma2Q32M21 443 aa17■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Ankib1Q6ZPS6 1085 aa17■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Rdm1Q9CQK3 281 aa17■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Sall1Q9ER74 1322 aa17■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Btn2a2A4QPC6 514 aa16.99■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Gm20425E9Q035 978 aaKnown RBP16.99■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Ccdc121E9Q6D3 323 aa16.99■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Lipo1J3QME6 396 aa16.99■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Grin1P35438 938 aa16.99■□□□□ 0.31
Tpm1-209ENSMUST00000113690 SrprbP47758 269 aa16.99■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Ttll12Q3UDE2 639 aa16.99■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Bag1Q60739 355 aa16.99■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Ppp2r2cQ8BG02 447 aa16.99■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Fam102bQ8BQS4 339 aa16.99■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Klhl30Q8C3F7 581 aa16.99■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Tada3Q8R0L9 432 aa16.99■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Cwc25Q9DBF7 416 aa16.99■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Dapk3O54784 448 aa16.99■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Ctdspl2Q8BG15 465 aa16.99■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Npc1l1Q6T3U4 1333 aa16.99■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Ovgp1Q62010 721 aa16.99■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Tubgcp2Q921G8 905 aa16.99■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Ankrd1Q9CR42 319 aa16.99■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Zranb2Q9R020 330 aaKnown RBP16.99■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Ncoa7Q6DFV7 943 aa16.98■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Abcf1Q6P542 837 aaKnown RBP16.98■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Necab1Q8BG18 352 aa16.98■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Haus7Q8BKT8 364 aa16.98■□□□□ 0.31
Tpm1-209ENSMUST00000113690 BaatQ91X34 420 aa16.98■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Eif5P59325 429 aaKnown RBP16.98■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Emilin1Q99K41 1017 aa16.98■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Speer4bQ9D9F7 267 aa16.98■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Nwd2Q6P5U7 1742 aa16.97■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Metap2O08663 478 aaKnown RBP16.97■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Me1P06801 572 aa16.97■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Cyp2d9P11714 504 aa16.97■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Tpm4Q6IRU2 248 aa16.97■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Atp8b5A3FIN4 1183 aa16.97■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Gm5624F6ZZG8 207 aa16.97■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Edrf1Q6GQV7 1239 aa16.97■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Map10Q8BJS7 891 aa16.97■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Ric1Q69ZJ7 1422 aa16.97■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Dnajc2P54103 621 aaKnown RBP16.96■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Tmem266Q8BZB3 538 aa16.96■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Flad1Q8R123 492 aa16.96■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Tgs1Q923W1 853 aa16.96■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Sik3Q6P4S6 1311 aa16.96■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Psmb7P70195 277 aa16.96■□□□□ 0.31
Tpm1-209ENSMUST00000113690 Cyp3a57D3YYZ0 503 aa16.95■□□□□ 0.3
Tpm1-209ENSMUST00000113690 Prl3d2F6R3P9 224 aa16.95■□□□□ 0.3
Tpm1-209ENSMUST00000113690 EmbP21995 330 aa16.95■□□□□ 0.3
Tpm1-209ENSMUST00000113690 Specc1lQ2KN98 1118 aaKnown RBP16.95■□□□□ 0.3
Tpm1-209ENSMUST00000113690 Gm3409A0A0G2JE67 319 aa16.95■□□□□ 0.3
Tpm1-209ENSMUST00000113690 Tshz2Q68FE9 1030 aa16.95■□□□□ 0.3
Tpm1-209ENSMUST00000113690 Slc5a1Q8C3K6 665 aa16.95■□□□□ 0.3
Tpm1-209ENSMUST00000113690 Kcnj14Q8JZN3 434 aa16.95■□□□□ 0.3
Tpm1-209ENSMUST00000113690 Kcnh3Q9WVJ0 1095 aa16.95■□□□□ 0.3
Tpm1-209ENSMUST00000113690 Lmod1Q8BVA4 595 aa16.95■□□□□ 0.3
Tpm1-209ENSMUST00000113690 Dctpp1Q9QY93 170 aa16.95■□□□□ 0.3
Tpm1-209ENSMUST00000113690 Slit1Q80TR4 1531 aa16.94■□□□□ 0.3
Tpm1-209ENSMUST00000113690 Pla2g4bP0C871 782 aa16.94■□□□□ 0.3
Tpm1-209ENSMUST00000113690 Lamb3Q61087 1168 aa16.94■□□□□ 0.3
Tpm1-209ENSMUST00000113690 Atp1a2Q6PIE5 1020 aa16.94■□□□□ 0.3
Tpm1-209ENSMUST00000113690 Clic6Q8BHB9 596 aa16.94■□□□□ 0.3
Tpm1-209ENSMUST00000113690 Ranbp6Q8BIV3 1105 aa16.94■□□□□ 0.3
Tpm1-209ENSMUST00000113690 Epc1Q8C9X6 813 aa16.94■□□□□ 0.3
Tpm1-209ENSMUST00000113690 ImmtQ8CAQ8 757 aaKnown RBP16.94■□□□□ 0.3
Tpm1-209ENSMUST00000113690 AK157302I3ITR1 129 aa16.94■□□□□ 0.3
Tpm1-209ENSMUST00000113690 Tshz1Q5DTH5 1084 aa16.94■□□□□ 0.3
Tpm1-209ENSMUST00000113690 Isca1Q9D924 129 aa16.94■□□□□ 0.3
Tpm1-209ENSMUST00000113690 EcsitQ9QZH6 435 aa16.94■□□□□ 0.3
Tpm1-209ENSMUST00000113690 Eif2ak3Q9Z2B5 1114 aa16.94■□□□□ 0.3
Tpm1-209ENSMUST00000113690 AtrnQ9WU60 1428 aa16.94■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms