RNA–Protein interactions for RNA: ENSMUST00000100942.8

Vamp1-203, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Vamp1, Length 3,011 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-203ENSMUST00000100942 Speer4dL7N216 212 aa14.28□□□□□ -0.12
Vamp1-203ENSMUST00000100942 Hap1O35668 628 aa14.28□□□□□ -0.12
Vamp1-203ENSMUST00000100942 Kif2aP28740 705 aa14.28□□□□□ -0.12
Vamp1-203ENSMUST00000100942 Zc3h12cQ5DTV4 884 aa14.28□□□□□ -0.12
Vamp1-203ENSMUST00000100942 Zfp397Q7TNK4 527 aa14.28□□□□□ -0.12
Vamp1-203ENSMUST00000100942 Nxf7Q80SZ6 620 aaKnown RBP14.28□□□□□ -0.12
Vamp1-203ENSMUST00000100942 Smarcc1P97496 1104 aa14.27□□□□□ -0.12
Vamp1-203ENSMUST00000100942 VeztQ3ZK22 780 aa14.27□□□□□ -0.12
Vamp1-203ENSMUST00000100942 Nap1l3Q794H2 544 aa14.27□□□□□ -0.12
Vamp1-203ENSMUST00000100942 Ano1Q8BHY3 960 aa14.27□□□□□ -0.12
Vamp1-203ENSMUST00000100942 Ndufa8Q9DCJ5 172 aa14.27□□□□□ -0.12
Vamp1-203ENSMUST00000100942 Npy5rO70342 466 aa14.27□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Usp25P57080 1055 aa14.27□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Cct2P80314 535 aaKnown RBP14.27□□□□□ -0.13
Vamp1-203ENSMUST00000100942 CenpqQ9CPQ5 267 aa14.27□□□□□ -0.13
Vamp1-203ENSMUST00000100942 AatfQ9JKX4 526 aaKnown RBP14.27□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Dpf1Q9QX66 387 aa14.27□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Mroh6V9GX81 722 aa14.27□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Zfp597E9Q6S0 419 aa14.26□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Nup88Q8CEC0 753 aaKnown RBP14.26□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Gm13023A2A8N2 498 aa14.26□□□□□ -0.13
Vamp1-203ENSMUST00000100942 TrdnE9Q9K5 693 aa14.26□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Slc39a11Q8BWY7 342 aa14.26□□□□□ -0.13
Vamp1-203ENSMUST00000100942 ImmtQ8CAQ8 757 aaKnown RBP14.26□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Plcd1Q8R3B1 756 aa14.26□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Trim59Q922Y2 403 aa14.26□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Nup98Q6PFD9 1816 aaKnown RBP14.26□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Mctp1E9PV86 951 aa14.25□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Rgs9O54828 675 aa14.25□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Cdk4P30285 303 aa14.25□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Znf496Q5SXI5 585 aa14.25□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Sgsm1Q8BPQ7 1093 aa14.25□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Zfp317Q8C0Q5 607 aa14.25□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Rufy2Q8R4C2 606 aa14.25□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Arhgap4B1AUY3 965 aa14.25□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Lnx1O70263 728 aa14.25□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Dnajc2P54103 621 aaKnown RBP14.25□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Ubash3aQ3V3E1 624 aa14.25□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Pla2g4fQ50L41 855 aa14.25□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Tmem143Q8VD26 458 aa14.25□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Vps33aQ9D2N9 598 aa14.25□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Pes1Q9EQ61 584 aaKnown RBP14.25□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Zkscan7E9PVW1 718 aa14.25□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Tmem59lQ7TNI2 337 aa14.25□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Zmynd15Q8C0R7 736 aa14.25□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Ufl1Q8CCJ3 793 aaKnown RBP14.25□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Srgap1Q91Z69 1062 aa14.25□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Mrpl44Q9CY73 333 aaKnown RBP14.25□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Ifi35Q9D8C4 286 aa14.25□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Stox1B2RQL2 990 aa14.24□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Vmn2r23E9PXI5 849 aa14.24□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Zscan29E9Q5B4 869 aa14.24□□□□□ -0.13
Vamp1-203ENSMUST00000100942 GabrdP22933 449 aa14.24□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Fsd1Q7TPM6 496 aa14.24□□□□□ -0.13
Vamp1-203ENSMUST00000100942 1700029H14RikE9PY36 240 aa14.24□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Capn2O08529 700 aa14.24□□□□□ -0.13
Vamp1-203ENSMUST00000100942 CltaO08585 235 aa14.24□□□□□ -0.13
Vamp1-203ENSMUST00000100942 TrhQ62361 256 aa14.24□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Popdc2Q9ES82 367 aa14.24□□□□□ -0.13
Vamp1-203ENSMUST00000100942 PdcQ9QW08 244 aa14.24□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Atp1b3P97370 278 aa14.23□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Ube3cQ80U95 1083 aa14.23□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Alg3Q8K2A8 438 aa14.23□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Emilin2Q8K482 1074 aa14.23□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Cnot6lQ8VEG6 555 aa14.23□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Bicd2Q921C5 820 aa14.23□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Creld2Q9CYA0 350 aa14.23□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Tbc1d7Q9D0K0 293 aa14.23□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Spata31d1bE9QA57 1361 aa14.23□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Mtx1P47802 317 aa14.23□□□□□ -0.13
Vamp1-203ENSMUST00000100942 ErmnQ5EBJ4 281 aa14.23□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Acap3Q6NXL5 833 aa14.23□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Kiaa0319lQ8K135 1048 aa14.23□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Duox1A2AQ92 1551 aa14.23□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Ube4aE9Q735 1028 aa14.23□□□□□ -0.13
Vamp1-203ENSMUST00000100942 InhbeO08717 350 aa14.23□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Ap5z1Q3U829 807 aa14.23□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Pram1Q6BCL1 675 aa14.23□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Gimap8Q75N62 688 aa14.23□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Otud6bQ8K2H2 294 aa14.23□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Mast3Q3U214 1321 aa14.22□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Kansl3A2RSY1 903 aaKnown RBP14.22□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Cyp3a59D3Z2W7 503 aa14.22□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Ica1lQ3TY65 431 aa14.22□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Lrrc43Q3V0L5 667 aa14.22□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Cep55Q8BT07 462 aa14.22□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Lmod1Q8BVA4 595 aa14.22□□□□□ -0.13
Vamp1-203ENSMUST00000100942 IcoslgQ9JHJ8 322 aa14.22□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Wdr19Q3UGF1 1341 aa14.22□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Znf326O88291 580 aa14.22□□□□□ -0.13
Vamp1-203ENSMUST00000100942 CtcfQ61164 736 aaKnown RBP14.22□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Ifit1Q64282 463 aa14.22□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Pcdhb22Q91XZ8 794 aa14.22□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Sf3b3Q921M3 1217 aaKnown RBP14.22□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Arglu1Q3UL36 271 aaKnown RBP14.21□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Ccdc96Q9CR92 584 aa14.21□□□□□ -0.13
Vamp1-203ENSMUST00000100942 FliiQ9JJ28 1271 aa14.21□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Add3Q9QYB5 706 aaKnown RBP14.21□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Krt85Q9Z2T6 507 aa14.21□□□□□ -0.13
Vamp1-203ENSMUST00000100942 Sall1Q9ER74 1322 aa14.21□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms