RNA–Protein interactions for RNA: ENSMUST00000100497.10

Actb-201, Transcript of Actin, cytoplasmic 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Actb, Length 1,920 nt, Biotype protein coding, Subcellular localisation Axon, Cell leading edge, Cytoplasm, Cytosol, Dendrite, Endoplasmic reticulum, Exosome, Growth cone, Lamellipodium, Perinuclear, Ribosome, Somatodendritic compartment .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Actb-201ENSMUST00000100497 Zscan25B2RX31 543 aa14.31□□□□□ -0.12
Actb-201ENSMUST00000100497 1700113H08RikE9Q9Q5 327 aa14.31□□□□□ -0.12
Actb-201ENSMUST00000100497 Metap2O08663 478 aaKnown RBP14.31□□□□□ -0.12
Actb-201ENSMUST00000100497 Ccdc174Q3U155 467 aa14.31□□□□□ -0.12
Actb-201ENSMUST00000100497 Babam1Q3UI43 333 aa14.31□□□□□ -0.12
Actb-201ENSMUST00000100497 Ckap2Q3V1H1 664 aa14.31□□□□□ -0.12
Actb-201ENSMUST00000100497 Ubash3aQ3V3E1 624 aa14.31□□□□□ -0.12
Actb-201ENSMUST00000100497 Cdc5lQ6A068 802 aaKnown RBP14.31□□□□□ -0.12
Actb-201ENSMUST00000100497 Nxf7Q80SZ6 620 aaKnown RBP14.31□□□□□ -0.12
Actb-201ENSMUST00000100497 Rnf214Q8BFU3 668 aaKnown RBP14.31□□□□□ -0.12
Actb-201ENSMUST00000100497 Lrit1Q8K099 624 aa14.31□□□□□ -0.12
Actb-201ENSMUST00000100497 Ccer1Q9CQL2 403 aa14.31□□□□□ -0.12
Actb-201ENSMUST00000100497 Yeats4Q9CR11 227 aaKnown RBP14.31□□□□□ -0.12
Actb-201ENSMUST00000100497 Utp3Q9JI13 469 aaKnown RBP14.31□□□□□ -0.12
Actb-201ENSMUST00000100497 Trip6Q9Z1Y4 480 aa14.31□□□□□ -0.12
Actb-201ENSMUST00000100497 Heg1E9Q7X6 1337 aa14.3□□□□□ -0.12
Actb-201ENSMUST00000100497 Dennd3A2RT67 1274 aa14.3□□□□□ -0.12
Actb-201ENSMUST00000100497 Zkscan7E9PVW1 718 aa14.3□□□□□ -0.12
Actb-201ENSMUST00000100497 Cyp2c23E9Q5K4 494 aa14.3□□□□□ -0.12
Actb-201ENSMUST00000100497 CltaO08585 235 aa14.3□□□□□ -0.12
Actb-201ENSMUST00000100497 Il15P48346 162 aa14.3□□□□□ -0.12
Actb-201ENSMUST00000100497 Usp25P57080 1055 aa14.3□□□□□ -0.12
Actb-201ENSMUST00000100497 Foxp1P58462 705 aa14.3□□□□□ -0.12
Actb-201ENSMUST00000100497 Atp1b3P97370 278 aa14.3□□□□□ -0.12
Actb-201ENSMUST00000100497 Krt40Q6IFX3 439 aa14.3□□□□□ -0.12
Actb-201ENSMUST00000100497 Ccdc82Q6PG04 518 aa14.3□□□□□ -0.12
Actb-201ENSMUST00000100497 Terf2ipQ91VL8 393 aa14.3□□□□□ -0.12
Actb-201ENSMUST00000100497 Cxcl11Q9JHH5 100 aa14.3□□□□□ -0.12
Actb-201ENSMUST00000100497 MpndQ3TV65 487 aa14.29□□□□□ -0.12
Actb-201ENSMUST00000100497 Gm28047Q3US59 414 aa14.29□□□□□ -0.12
Actb-201ENSMUST00000100497 Rbm26Q6NZN0 1012 aaKnown RBP14.29□□□□□ -0.12
Actb-201ENSMUST00000100497 Chd1lQ9CXF7 900 aa14.29□□□□□ -0.12
Actb-201ENSMUST00000100497 Stag1Q9D3E6 1258 aa14.29□□□□□ -0.12
Actb-201ENSMUST00000100497 Add3Q9QYB5 706 aaKnown RBP14.29□□□□□ -0.12
Actb-201ENSMUST00000100497 Ubn2Q80WC1 1314 aa14.29□□□□□ -0.12
Actb-201ENSMUST00000100497 Myh4Q5SX39 1939 aa14.29□□□□□ -0.12
Actb-201ENSMUST00000100497 Cyp2d34L7N463 504 aa14.29□□□□□ -0.12
Actb-201ENSMUST00000100497 Tuft1O08970 390 aa14.29□□□□□ -0.12
Actb-201ENSMUST00000100497 Clec11aO88200 328 aa14.29□□□□□ -0.12
Actb-201ENSMUST00000100497 Cd3dP04235 173 aa14.29□□□□□ -0.12
Actb-201ENSMUST00000100497 Anp32cQ64G17 123 aa14.29□□□□□ -0.12
Actb-201ENSMUST00000100497 Bola3Q8CEI1 110 aa14.29□□□□□ -0.12
Actb-201ENSMUST00000100497 RtcbQ99LF4 505 aaKnown RBP14.29□□□□□ -0.12
Actb-201ENSMUST00000100497 Gtf2a1Q99PM3 378 aa14.29□□□□□ -0.12
Actb-201ENSMUST00000100497 Tcof1O08784 1320 aaKnown RBP14.28□□□□□ -0.12
Actb-201ENSMUST00000100497 Arhgap33Q80YF9 1305 aa14.28□□□□□ -0.12
Actb-201ENSMUST00000100497 Stat5bP42232 786 aa14.28□□□□□ -0.12
Actb-201ENSMUST00000100497 GalcP54818 684 aa14.28□□□□□ -0.12
Actb-201ENSMUST00000100497 Rrp1P56183 494 aaKnown RBP14.28□□□□□ -0.12
Actb-201ENSMUST00000100497 Cep131Q62036 1060 aa14.28□□□□□ -0.12
Actb-201ENSMUST00000100497 IqcgQ80W32 419 aa14.28□□□□□ -0.12
Actb-201ENSMUST00000100497 Bsdc1Q80Y55 427 aa14.28□□□□□ -0.12
Actb-201ENSMUST00000100497 Hook1Q8BIL5 728 aa14.28□□□□□ -0.12
Actb-201ENSMUST00000100497 Rbm43Q99J64 343 aa14.28□□□□□ -0.12
Actb-201ENSMUST00000100497 Myh2G3UW82 1942 aa14.28□□□□□ -0.12
Actb-201ENSMUST00000100497 Slc4a4O88343 1079 aa14.27□□□□□ -0.12
Actb-201ENSMUST00000100497 Cyp2d9P11714 504 aa14.27□□□□□ -0.12
Actb-201ENSMUST00000100497 Pde6aP27664 859 aa14.27□□□□□ -0.12
Actb-201ENSMUST00000100497 Tyro3P55144 880 aa14.27□□□□□ -0.12
Actb-201ENSMUST00000100497 Tmem59lQ7TNI2 337 aa14.27□□□□□ -0.12
Actb-201ENSMUST00000100497 Sde2Q8K1J5 448 aaKnown RBP14.27□□□□□ -0.12
Actb-201ENSMUST00000100497 Ipo4Q8VI75 1082 aa14.27□□□□□ -0.12
Actb-201ENSMUST00000100497 Osbpl5Q9ER64 874 aa14.27□□□□□ -0.12
Actb-201ENSMUST00000100497 Rgs12Q8CGE9 1381 aa14.27□□□□□ -0.12
Actb-201ENSMUST00000100497 CpdO89001 1377 aa14.27□□□□□ -0.13
Actb-201ENSMUST00000100497 Gm13023A2A8N2 498 aa14.27□□□□□ -0.13
Actb-201ENSMUST00000100497 Gm973E9Q295 1059 aa14.27□□□□□ -0.13
Actb-201ENSMUST00000100497 Ccng2O08918 344 aa14.27□□□□□ -0.13
Actb-201ENSMUST00000100497 Eva1cP58659 440 aa14.27□□□□□ -0.13
Actb-201ENSMUST00000100497 Ube3cQ80U95 1083 aa14.27□□□□□ -0.13
Actb-201ENSMUST00000100497 Hps6Q8BLY7 805 aa14.27□□□□□ -0.13
Actb-201ENSMUST00000100497 McamQ8R2Y2 648 aaKnown RBP14.27□□□□□ -0.13
Actb-201ENSMUST00000100497 Myh13B1AR69 1938 aa14.27□□□□□ -0.13
Actb-201ENSMUST00000100497 Mctp1E9PV86 951 aa14.26□□□□□ -0.13
Actb-201ENSMUST00000100497 Vmn2r23E9PXI5 849 aa14.26□□□□□ -0.13
Actb-201ENSMUST00000100497 Cyp26a1O55127 497 aa14.26□□□□□ -0.13
Actb-201ENSMUST00000100497 Mcm3P25206 812 aaKnown RBP14.26□□□□□ -0.13
Actb-201ENSMUST00000100497 Rps8P62242 208 aaKnown RBP14.26□□□□□ -0.13
Actb-201ENSMUST00000100497 Cplx1P63040 134 aa14.26□□□□□ -0.13
Actb-201ENSMUST00000100497 Lins1Q3U1D0 764 aa14.26□□□□□ -0.13
Actb-201ENSMUST00000100497 Hvcn1Q3U2S8 269 aa14.26□□□□□ -0.13
Actb-201ENSMUST00000100497 Spg7Q3ULF4 781 aa14.26□□□□□ -0.13
Actb-201ENSMUST00000100497 VeztQ3ZK22 780 aa14.26□□□□□ -0.13
Actb-201ENSMUST00000100497 Ehmt1Q5DW34 1296 aa14.26□□□□□ -0.13
Actb-201ENSMUST00000100497 Znf496Q5SXI5 585 aa14.26□□□□□ -0.13
Actb-201ENSMUST00000100497 Amer1Q7TS75 1132 aa14.26□□□□□ -0.13
Actb-201ENSMUST00000100497 Nop14Q8R3N1 860 aaKnown RBP14.26□□□□□ -0.13
Actb-201ENSMUST00000100497 Stk38Q91VJ4 465 aa14.26□□□□□ -0.13
Actb-201ENSMUST00000100497 Tbc1d7Q9D0K0 293 aa14.26□□□□□ -0.13
Actb-201ENSMUST00000100497 Dydc2Q9D3X8 139 aa14.26□□□□□ -0.13
Actb-201ENSMUST00000100497 Irs4Q9Z0Y7 1216 aa14.26□□□□□ -0.13
Actb-201ENSMUST00000100497 Myh6Q02566 1938 aaKnown RBP14.26□□□□□ -0.13
Actb-201ENSMUST00000100497 Lipo1J3QME6 396 aa14.25□□□□□ -0.13
Actb-201ENSMUST00000100497 Nap1l2P51860 460 aa14.25□□□□□ -0.13
Actb-201ENSMUST00000100497 Usp28Q5I043 1051 aa14.25□□□□□ -0.13
Actb-201ENSMUST00000100497 Slc39a11Q8BWY7 342 aa14.25□□□□□ -0.13
Actb-201ENSMUST00000100497 Shisa4Q8CA71 197 aa14.25□□□□□ -0.13
Actb-201ENSMUST00000100497 Rbm6S4R1W5 1118 aaKnown RBP14.25□□□□□ -0.13
Actb-201ENSMUST00000100497 Sh3tc1G3X9F6 1346 aa14.25□□□□□ -0.13
Actb-201ENSMUST00000100497 AfdnQ9QZQ1 1820 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 25.4 ms