RNA–Protein interactions for RNA: ENSMUST00000074679.3

Sh3rf2-202, Transcript of Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf2, Length 4,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2-202ENSMUST00000074679 Cep57l1Q8VDS7 400 aa8.42□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Mybbp1aQ7TPV4 1344 aaKnown RBP8.42□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Brpf3B2KF05 1204 aaKnown RBP8.42□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Card6E9PWH2 1175 aa8.42□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Fsd1Q7TPM6 496 aa8.42□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Phf23Q8BSN5 401 aa8.42□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Noc2lQ9WV70 747 aaKnown RBP8.42□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Cntnap1O54991 1385 aa8.42□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Rad50P70388 1312 aa8.42□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Pet2A2AHY8 747 aa8.42□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Oas2E9Q9A9 742 aa8.42□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Tnni2P13412 182 aa8.42□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Prl3d1P18121 224 aa8.42□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Nom1Q3UFM5 854 aaKnown RBP8.42□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Hand2Q61039 217 aa8.42□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 E4f1Q8CCE9 783 aa8.42□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Stxbp4Q9WV89 557 aa8.42□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Ubash3aQ3V3E1 624 aa8.41□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Sycp1Q62209 993 aa8.41□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Ifit1Q64282 463 aa8.41□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Gpatch3Q8BIY1 525 aa8.41□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Lmod1Q8BVA4 595 aa8.41□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Adarb2Q9JI20 745 aa8.41□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Igbp1bQ9QZ29 343 aa8.41□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Nfe2l3Q9WTM4 660 aa8.41□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 GakQ99KY4 1305 aa8.41□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Pkp1P97350 728 aaKnown RBP8.41□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Cep55Q8BT07 462 aa8.41□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Ptcd1Q8C2E4 695 aaKnown RBP8.41□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Ccdc158Q8CDI6 1109 aa8.41□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Foxo4Q9WVH3 505 aa8.41□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Zbtb21E9Q444 1094 aa8.41□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Gm4340L7N2C4 268 aa8.41□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Il15P48346 162 aa8.41□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Ttll12Q3UDE2 639 aa8.41□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Tmed8Q3UHI4 326 aa8.41□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Abtb2Q7TQI7 1024 aa8.41□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Rnf41Q8BH75 317 aa8.41□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Appbp2Q9DAX9 585 aa8.41□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Syt10Q9R0N4 523 aa8.41□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Terf1P70371 421 aa8.4□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Atp2b4Q6Q477 1205 aa8.4□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Slfnl1Q8BHW9 410 aa8.4□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Lrrfip2Q91WK0 415 aa8.4□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Dnajc2P54103 621 aaKnown RBP8.4□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Olfm5Q8BU90 496 aa8.4□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Lmbrd2Q8C561 694 aa8.4□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Ubxn4Q8VCH8 506 aa8.4□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Cfap58B2RW38 873 aa8.4□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 4930523C07RikE9Q2T4 99 aa8.4□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Slc38a10Q5I012 1090 aa8.4□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Mrpl50Q8VDT9 159 aaKnown RBP8.4□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 SrrtQ99MR6 875 aaKnown RBP8.4□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Gja10Q9WUS4 505 aa8.4□□□□□ -1.06
Sh3rf2-202ENSMUST00000074679 Npc1l1Q6T3U4 1333 aa8.4□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Slc4a4O88343 1079 aa8.4□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 SowahdQ8BY98 327 aa8.4□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Rufy2Q8R4C2 606 aa8.4□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Rai14Q9EP71 979 aaKnown RBP8.4□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Zfp804bA0A0G2JGH6 1343 aa8.4□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Nphp3Q7TNH6 1325 aa8.4□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Mtx1P47802 317 aa8.39□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Frat1P70339 274 aa8.39□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Fchsd1Q6PFY1 688 aa8.39□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Bloc1s2Q9CWG9 143 aa8.39□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Galntl5Q9D4M9 431 aa8.39□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Setdb1O88974 1307 aa8.39□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Sos2Q02384 1333 aa8.39□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Gnat2P50149 354 aa8.39□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Fam228bQ497Q6 232 aa8.39□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Slu7Q8BHJ9 585 aa8.39□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Ano1Q8BHY3 960 aa8.39□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Lrrc45Q8CIM1 670 aa8.39□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Hdac9Q99N13 588 aa8.39□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Irx4Q9QY61 515 aa8.39□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Robo1O89026 1612 aa8.39□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Kifc2O08672 792 aa8.39□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Cep135Q6P5D4 1140 aa8.39□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Arid5bQ8BM75 1188 aaKnown RBP8.39□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Me3Q8BMF3 604 aa8.39□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Lnx1O70263 728 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 GabrdP22933 449 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Kcnj4P52189 445 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 HmmrQ00547 794 aaKnown RBP8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Cfap157Q0VFX2 523 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Kank4Q6P9J5 1016 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 DpydQ8CHR6 1025 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Cnot6lQ8VEG6 555 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Ube3bQ9ES34 1070 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Mast3Q3U214 1321 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Adgrb1Q3UHD1 1582 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Mapkapk5O54992 473 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Hdgfl1Q2VPR5 283 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Gpr162Q3UN16 588 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Gm21985Q6P6P5 1106 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Atp1a3Q6PIC6 1013 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Dennd3A2RT67 1274 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Ces1aE9PYP1 563 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Cdkl5Q3UTQ8 938 aa8.38□□□□□ -1.07
Sh3rf2-202ENSMUST00000074679 Gas2l3Q3UWW6 683 aa8.38□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms