RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Cdkl5Q3UTQ8 938 aa18.64■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Ankib1Q6ZPS6 1085 aa18.64■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Clca2Q8BG22 942 aa18.64■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 VmacQ8BP01 174 aa18.64■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Fsd2Q8BZ52 692 aa18.64■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Lrp6O88572 1613 aa18.64■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Znf326O88291 580 aa18.63■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Gm12185Q5NCB2 835 aa18.63■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Dnm3Q8BZ98 863 aa18.63■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Casp12O08736 419 aa18.63■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Atf3Q60765 181 aa18.63■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Fez2Q6TYB5 348 aa18.63■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Vps37dQ810I0 261 aa18.63■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 4930548H24RikQ9D496 437 aa18.63■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 H2afxP27661 143 aaKnown RBP18.62■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Washc4Q3UMB9 1173 aa18.62■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Hand2Q61039 217 aa18.62■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Gnl3lQ6PGG6 577 aaKnown RBP18.62■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Ncoa5Q91W39 579 aaKnown RBP18.62■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Riok1Q922Q2 567 aa18.62■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Fbxo3Q9DC63 480 aa18.62■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Elf2Q9JHC9 593 aa18.62■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Lrp5Q91VN0 1614 aa18.62■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Ktn1Q61595 1327 aaKnown RBP18.62■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 FAM186AQ9D9R9 1790 aa18.61■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Epha2Q03145 977 aa18.61■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Pcdhb14Q6PB90 796 aa18.61■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Slx1bQ8BX32 270 aa18.61■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Acot9Q9R0X4 439 aaKnown RBP18.61■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Usp13Q5BKP2 858 aa18.6■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Edrf1Q6GQV7 1239 aa18.6■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Ift57Q8BXG3 429 aa18.6■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Cnot6lQ8VEG6 555 aa18.6■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Med23Q80YQ2 1367 aa18.6■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Cplx2P84086 134 aa18.6■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Fam53cQ8BXQ8 393 aa18.6■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Dnajc14Q921R4 703 aa18.6■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Tgs1Q923W1 853 aa18.6■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 NenfQ9CQ45 171 aa18.6■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Nav1Q8CH77 1875 aa18.59■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Pcdhb9E9Q5G2 828 aa18.59■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Cyp26a1O55127 497 aa18.59■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 GmnnO88513 206 aa18.59■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Prl3d1P18121 224 aa18.59■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Kif2aP28740 705 aa18.59■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Ppfia3P60469 1194 aa18.59■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Ckap2Q3V1H1 664 aa18.59■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Nol10Q5RJG1 687 aaKnown RBP18.59■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Zkscan8Q8BSL0 588 aa18.59■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Etf1Q8BWY3 437 aaKnown RBP18.59■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Rec8Q8C5S7 591 aa18.59■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Ttc19Q8CC21 365 aa18.59■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Bola3Q8CEI1 110 aa18.59■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Ccdc47Q9D024 483 aaKnown RBP18.59■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Naaladl2A0A0N4SUJ3 795 aa18.58■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Metap2O08663 478 aaKnown RBP18.58■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Foxp1P58462 705 aa18.58■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Slc7a1Q09143 622 aa18.58■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Arhgef16Q3U5C8 713 aa18.58■□□□□ 0.57
Ttc39b-202ENSMUST00000048274 Cyp2d9P11714 504 aa18.58■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Nme8Q715T0 586 aa18.58■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Slitrk3Q810B9 980 aa18.58■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Tcp11l1Q8BTG3 509 aa18.58■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Gigyf1Q99MR1 1044 aaKnown RBP18.58■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 IncenpQ9WU62 880 aa18.58■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Ccne2Q9Z238 404 aa18.58■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Gm21680A0A0G2JGR8 267 aa18.57■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Pde6aP27664 859 aa18.57■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Cyp19a1P28649 503 aa18.57■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Ercc3P49135 783 aa18.57■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Zbtb38Q3LR78 1197 aa18.57■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Tshz1Q5DTH5 1084 aa18.57■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Abtb2Q7TQI7 1024 aa18.57■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Sec62Q8BU14 398 aaKnown RBP18.57■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Zbtb43Q9DAI4 467 aa18.57■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Large1Q9Z1M7 756 aa18.57■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Bin1O08539 588 aaKnown RBP18.56■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Gpr182P43142 395 aa18.56■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Ric8aQ3TIR3 530 aa18.56■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 IbspQ61711 324 aa18.56■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Spag5Q7TME2 1165 aa18.56■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Evc2Q8K1G2 1220 aa18.56■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Mtmr6Q8VE11 617 aa18.56■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Fam84aQ9D650 292 aa18.56■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Ampd3O08739 766 aa18.56■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Dapk3O54784 448 aa18.56■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Ddx17Q501J6 650 aaKnown RBP18.56■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Tbx2Q60707 711 aa18.56■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Nlrp9aQ66X03 949 aa18.56■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Acnat2Q8BGG9 420 aa18.56■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Frmd3Q8BHD4 595 aa18.56■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Mei4Q8BRM6 389 aa18.56■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Cadps2Q8BYR5 1297 aa18.56■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Spata32Q8C5V0 334 aa18.56■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Ccdc150Q8CDI7 1110 aa18.56■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Brd3Q8K2F0 726 aaKnown RBP18.56■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 ZgpatQ8VDM1 511 aa18.56■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 MbipQ99LQ1 341 aa18.56■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 Setdb1O88974 1307 aa18.55■□□□□ 0.56
Ttc39b-202ENSMUST00000048274 CoblQ5NBX1 1337 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 84.2 ms